RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 TTC13Q8NBP0 860 aa8.73□□□□□ -1.01
CASC4-210ENST00000559550 CDHR5Q9HBB8 845 aa8.73□□□□□ -1.01
CASC4-210ENST00000559550 RBM27Q9P2N5 1060 aaKnown RBP8.73□□□□□ -1.01
CASC4-210ENST00000559550 HDGFP51858 240 aaKnown RBP8.72□□□□□ -1.01
CASC4-210ENST00000559550 HAP1P54257 671 aaPredicted RBP8.72□□□□□ -1.01
CASC4-210ENST00000559550 SPDYE16A6NNV3 312 aaPredicted RBP8.71□□□□□ -1.02
CASC4-210ENST00000559550 GDF9O60383 454 aa8.71□□□□□ -1.02
CASC4-210ENST00000559550 NECTIN2Q92692 538 aa8.71□□□□□ -1.02
CASC4-210ENST00000559550 LIAT1Q6ZQX7 453 aa8.7□□□□□ -1.02
CASC4-210ENST00000559550 SLF2Q8IX21 1173 aa8.69□□□□□ -1.02
CASC4-210ENST00000559550 ANKLE1Q8NAG6 615 aa8.68□□□□□ -1.02
CASC4-210ENST00000559550 AAASQ9NRG9 546 aa8.68□□□□□ -1.02
CASC4-210ENST00000559550 FAM187AA6NFU0 413 aa8.67□□□□□ -1.02
CASC4-210ENST00000559550 PPEF1O14829 653 aaPredicted RBP8.67□□□□□ -1.02
CASC4-210ENST00000559550 OSBPP22059 807 aa8.67□□□□□ -1.02
CASC4-210ENST00000559550 ST8SIA5O15466 376 aa8.66□□□□□ -1.02
CASC4-210ENST00000559550 ZNF697Q5TEC3 545 aa8.66□□□□□ -1.02
CASC4-210ENST00000559550 BLOC1S3Q6QNY0 202 aa8.66□□□□□ -1.02
CASC4-210ENST00000559550 NPDC1Q9NQX5 325 aaPredicted RBP8.66□□□□□ -1.02
CASC4-210ENST00000559550 GRXCR2A6NFK2 248 aa8.65□□□□□ -1.02
CASC4-210ENST00000559550 TLL1O43897 1013 aa8.65□□□□□ -1.02
CASC4-210ENST00000559550 EYA1Q99502 592 aa8.65□□□□□ -1.02
CASC4-210ENST00000559550 PCDHB3Q9Y5E6 796 aa8.65□□□□□ -1.02
CASC4-210ENST00000559550 TNFRSF10AO00220 468 aa8.64□□□□□ -1.03
CASC4-210ENST00000559550 PADI6Q6TGC4 694 aa8.64□□□□□ -1.03
CASC4-210ENST00000559550 ARIH1Q9Y4X5 557 aaPredicted RBP8.64□□□□□ -1.03
CASC4-210ENST00000559550 KDM2AQ9Y2K7 1162 aa8.63□□□□□ -1.03
CASC4-210ENST00000559550 S1PR4O95977 384 aa8.62□□□□□ -1.03
CASC4-210ENST00000559550 SLC24A1O60721 1099 aa8.61□□□□□ -1.03
CASC4-210ENST00000559550 PLA2G2CQ5R387 149 aa8.61□□□□□ -1.03
CASC4-210ENST00000559550 PRR14Q9BWN1 585 aa8.61□□□□□ -1.03
CASC4-210ENST00000559550 DACH1Q9UI36 760 aa8.61□□□□□ -1.03
CASC4-210ENST00000559550 CRIPAKQ8N1N5 446 aa8.6□□□□□ -1.03
CASC4-210ENST00000559550 STK17AQ9UEE5 414 aa8.6□□□□□ -1.03
CASC4-210ENST00000559550 PKD2L1Q9P0L9 805 aa8.59□□□□□ -1.03
CASC4-210ENST00000559550 WIPF1O43516 503 aa8.58□□□□□ -1.04
CASC4-210ENST00000559550 WFS1O76024 890 aa8.58□□□□□ -1.04
CASC4-210ENST00000559550 NFX1Q12986 1120 aaKnown RBP8.58□□□□□ -1.04
CASC4-210ENST00000559550 ACTN4O43707 911 aaKnown RBP8.56□□□□□ -1.04
CASC4-210ENST00000559550 AVPP01185 164 aa8.56□□□□□ -1.04
CASC4-210ENST00000559550 VSIG10Q8N0Z9 540 aa8.56□□□□□ -1.04
CASC4-210ENST00000559550 LCE2CQ5TA81 110 aa8.55□□□□□ -1.04
CASC4-210ENST00000559550 GMPR2Q9P2T1 348 aaKnown RBP8.55□□□□□ -1.04
CASC4-210ENST00000559550 ADH1BP00325 375 aa8.54□□□□□ -1.04
CASC4-210ENST00000559550 SLC4A3P48751 1232 aa8.54□□□□□ -1.04
CASC4-210ENST00000559550 E2F4Q16254 413 aa8.54□□□□□ -1.04
CASC4-210ENST00000559550 LMOD2Q6P5Q4 547 aa8.53□□□□□ -1.04
CASC4-210ENST00000559550 TOR4AQ9NXH8 423 aa8.52□□□□□ -1.05
CASC4-210ENST00000559550 SUZ12Q15022 739 aaKnown RBP8.51□□□□□ -1.05
CASC4-210ENST00000559550 DNAJB2P25686 324 aa8.5□□□□□ -1.05
CASC4-210ENST00000559550 SLC6A16Q9GZN6 736 aa8.5□□□□□ -1.05
CASC4-210ENST00000559550 TMEM134Q9H6X4 195 aa8.5□□□□□ -1.05
CASC4-210ENST00000559550 WDR70Q9NW82 654 aa8.5□□□□□ -1.05
CASC4-210ENST00000559550 SMCPP49901 116 aaPredicted RBP8.49□□□□□ -1.05
CASC4-210ENST00000559550 INSM1Q01101 510 aaPredicted RBP8.49□□□□□ -1.05
CASC4-210ENST00000559550 KMT5BQ4FZB7 885 aa8.49□□□□□ -1.05
CASC4-210ENST00000559550 C11orf95C9JLR9 678 aaPredicted RBP8.48□□□□□ -1.05
CASC4-210ENST00000559550 SLC10A3P09131 477 aa8.48□□□□□ -1.05
CASC4-210ENST00000559550 FOXC1Q12948 553 aa8.48□□□□□ -1.05
CASC4-210ENST00000559550 AXIN1O15169 862 aa8.47□□□□□ -1.05
CASC4-210ENST00000559550 CFHP08603 1231 aa8.47□□□□□ -1.05
CASC4-210ENST00000559550 CTC1Q2NKJ3 1217 aa8.46□□□□□ -1.06
CASC4-210ENST00000559550 KCNV2Q8TDN2 545 aa8.46□□□□□ -1.06
CASC4-210ENST00000559550 NR1I2O75469 434 aa8.45□□□□□ -1.06
CASC4-210ENST00000559550 SCUBE3Q8IX30 993 aa8.45□□□□□ -1.06
CASC4-210ENST00000559550 RPIAP49247 311 aa8.44□□□□□ -1.06
CASC4-210ENST00000559550 ADGRG1Q9Y653 693 aa8.44□□□□□ -1.06
CASC4-210ENST00000559550 RCCD1A6NED2 376 aa8.43□□□□□ -1.06
CASC4-210ENST00000559550 RBM46Q8TBY0 533 aaKnown RBP8.42□□□□□ -1.06
CASC4-210ENST00000559550 PTGDRQ13258 359 aa8.41□□□□□ -1.06
CASC4-210ENST00000559550 TERTO14746 1132 aaKnown RBP8.4□□□□□ -1.06
CASC4-210ENST00000559550 CYP4X1Q8N118 509 aa8.4□□□□□ -1.06
CASC4-210ENST00000559550 SPSB2Q99619 263 aa8.4□□□□□ -1.06
CASC4-210ENST00000559550 SNRPBP14678 240 aaKnown RBP8.39□□□□□ -1.07
CASC4-210ENST00000559550 FAM161AQ3B820 660 aa8.38□□□□□ -1.07
CASC4-210ENST00000559550 PUS10Q3MIT2 529 aaKnown RBP8.38□□□□□ -1.07
CASC4-210ENST00000559550 LORP23490 312 aaPredicted RBP8.37□□□□□ -1.07
CASC4-210ENST00000559550 P3H3Q8IVL6 736 aa8.37□□□□□ -1.07
CASC4-210ENST00000559550 ATP13A2Q9NQ11 1180 aa8.37□□□□□ -1.07
CASC4-210ENST00000559550 FCF1Q9Y324 198 aaKnown RBP8.37□□□□□ -1.07
CASC4-210ENST00000559550 CD2BP2O95400 341 aaKnown RBP8.36□□□□□ -1.07
CASC4-210ENST00000559550 MLLT3P42568 568 aaPredicted RBP8.36□□□□□ -1.07
CASC4-210ENST00000559550 THAP11Q96EK4 314 aa8.36□□□□□ -1.07
CASC4-210ENST00000559550 SMPD1P17405 629 aa8.35□□□□□ -1.07
CASC4-210ENST00000559550 ARHGEF1Q92888 912 aaKnown RBP8.35□□□□□ -1.07
CASC4-210ENST00000559550 TRIM47Q96LD4 638 aa8.35□□□□□ -1.07
CASC4-210ENST00000559550 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.34□□□□□ -1.07
CASC4-210ENST00000559550 FAM160A2Q8N612 972 aaPredicted RBP8.34□□□□□ -1.07
CASC4-210ENST00000559550 MORN1Q5T089 497 aa8.32□□□□□ -1.08
CASC4-210ENST00000559550 TTC24A2A3L6 582 aaPredicted RBP8.31□□□□□ -1.08
CASC4-210ENST00000559550 WNT7AO00755 349 aa8.3□□□□□ -1.08
CASC4-210ENST00000559550 SNIP1Q8TAD8 396 aaKnown RBP8.3□□□□□ -1.08
CASC4-210ENST00000559550 PXYLP1Q8TE99 480 aa8.3□□□□□ -1.08
CASC4-210ENST00000559550 SENP2Q9HC62 589 aa8.3□□□□□ -1.08
CASC4-210ENST00000559550 PRDM9Q9NQV7 894 aa8.29□□□□□ -1.08
CASC4-210ENST00000559550 J3QL48 77 aa8.28□□□□□ -1.08
CASC4-210ENST00000559550 SEMA3EO15041 775 aa8.28□□□□□ -1.08
CASC4-210ENST00000559550 GMPRP36959 345 aa8.25□□□□□ -1.09
CASC4-210ENST00000559550 HPS1Q92902 700 aa8.25□□□□□ -1.09
CASC4-210ENST00000559550 KIFC2Q96AC6 838 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms