RNA–Protein interactions for RNA: ENST00000558904.2

RORA-208, Transcript of RAR related orphan receptor A, humanhuman

TSL 2

Gene RORA, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-208ENST00000558904 EFCAB6Q5THR3 1501 aa13.94□□□□□ -0.18
RORA-208ENST00000558904 MROH1Q8NDA8 1641 aa13.93□□□□□ -0.18
RORA-208ENST00000558904 MYOM3Q5VTT5 1437 aa13.93□□□□□ -0.18
RORA-208ENST00000558904 NCOA3Q9Y6Q9 1424 aa13.93□□□□□ -0.18
RORA-208ENST00000558904 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.93□□□□□ -0.18
RORA-208ENST00000558904 TET3O43151 1660 aa13.93□□□□□ -0.18
RORA-208ENST00000558904 SETD1AO15047 1707 aaKnown RBP13.93□□□□□ -0.18
RORA-208ENST00000558904 PIK3C2BO00750 1634 aa13.92□□□□□ -0.18
RORA-208ENST00000558904 ERBINQ96RT1 1412 aa13.91□□□□□ -0.18
RORA-208ENST00000558904 C1QBPQ07021 282 aaKnown RBP13.91□□□□□ -0.18
RORA-208ENST00000558904 CADPS2Q86UW7 1296 aa13.91□□□□□ -0.18
RORA-208ENST00000558904 C14orf37Q86TY3 774 aa13.9□□□□□ -0.18
RORA-208ENST00000558904 CDK12Q9NYV4 1490 aaPredicted RBP13.89□□□□□ -0.19
RORA-208ENST00000558904 KIF15Q9NS87 1388 aa13.89□□□□□ -0.19
RORA-208ENST00000558904 RRP7BPQ9NSQ0 103 aa13.89□□□□□ -0.19
RORA-208ENST00000558904 NWD1Q149M9 1564 aa13.88□□□□□ -0.19
RORA-208ENST00000558904 ATF3P18847 181 aa13.88□□□□□ -0.19
RORA-208ENST00000558904 C19orf44Q9H6X5 657 aa13.88□□□□□ -0.19
RORA-208ENST00000558904 TBX22Q9Y458 520 aa13.88□□□□□ -0.19
RORA-208ENST00000558904 PPP1R15AO75807 674 aaPredicted RBP13.87□□□□□ -0.19
RORA-208ENST00000558904 COL16A1Q07092 1604 aaPredicted RBP13.86□□□□□ -0.19
RORA-208ENST00000558904 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.85□□□□□ -0.19
RORA-208ENST00000558904 LMTK2Q8IWU2 1503 aa13.85□□□□□ -0.19
RORA-208ENST00000558904 PLEKHG1Q9ULL1 1385 aa13.84□□□□□ -0.19
RORA-208ENST00000558904 LRP6O75581 1613 aa13.84□□□□□ -0.19
RORA-208ENST00000558904 NOS1P29475 1434 aa13.83□□□□□ -0.2
RORA-208ENST00000558904 CHD2O14647 1828 aaKnown RBP13.83□□□□□ -0.2
RORA-208ENST00000558904 ADGRB3O60242 1522 aa13.82□□□□□ -0.2
RORA-208ENST00000558904 NUTM2BA6NNL0 878 aaPredicted RBP13.82□□□□□ -0.2
RORA-208ENST00000558904 NUTM2EB1AL46 878 aaPredicted RBP13.82□□□□□ -0.2
RORA-208ENST00000558904 RBM6P78332 1123 aaKnown RBP13.82□□□□□ -0.2
RORA-208ENST00000558904 NUTM2AQ8IVF1 878 aaPredicted RBP13.82□□□□□ -0.2
RORA-208ENST00000558904 RNF216Q9NWF9 866 aaPredicted RBP13.82□□□□□ -0.2
RORA-208ENST00000558904 AHDC1Q5TGY3 1603 aaPredicted RBP13.82□□□□□ -0.2
RORA-208ENST00000558904 PIK3R4Q99570 1358 aa13.82□□□□□ -0.2
RORA-208ENST00000558904 SHPRHQ149N8 1683 aa13.82□□□□□ -0.2
RORA-208ENST00000558904 LRRC59Q96AG4 307 aaKnown RBP13.81□□□□□ -0.2
RORA-208ENST00000558904 NGLY1Q96IV0 654 aa13.81□□□□□ -0.2
RORA-208ENST00000558904 QTRT2Q9H974 415 aaKnown RBP13.81□□□□□ -0.2
RORA-208ENST00000558904 AFF2P51816 1311 aa13.81□□□□□ -0.2
RORA-208ENST00000558904 ANKRD30AQ9BXX3 1397 aa13.81□□□□□ -0.2
RORA-208ENST00000558904 ABCC5O15440 1437 aa13.8□□□□□ -0.2
RORA-208ENST00000558904 NUTM2DQ5VT03 806 aaPredicted RBP13.79□□□□□ -0.2
RORA-208ENST00000558904 CNKSR2Q8WXI2 1034 aa13.79□□□□□ -0.2
RORA-208ENST00000558904 RIMS2Q9UQ26 1411 aa13.79□□□□□ -0.2
RORA-208ENST00000558904 KANK4Q5T7N3 995 aaPredicted RBP13.78□□□□□ -0.2
RORA-208ENST00000558904 BRINP3Q76B58 766 aa13.78□□□□□ -0.2
RORA-208ENST00000558904 ZRANB1Q9UGI0 708 aa13.78□□□□□ -0.2
RORA-208ENST00000558904 ZFYVE9O95405 1425 aa13.78□□□□□ -0.2
RORA-208ENST00000558904 RPRD2Q5VT52 1461 aaKnown RBP13.78□□□□□ -0.2
RORA-208ENST00000558904 VPS8Q8N3P4 1428 aa13.76□□□□□ -0.21
RORA-208ENST00000558904 SETD5Q9C0A6 1442 aa13.76□□□□□ -0.21
RORA-208ENST00000558904 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.76□□□□□ -0.21
RORA-208ENST00000558904 DAPK1P53355 1430 aa13.75□□□□□ -0.21
RORA-208ENST00000558904 C8orf37Q96NL8 207 aa13.75□□□□□ -0.21
RORA-208ENST00000558904 AMOTL2Q9Y2J4 779 aa13.75□□□□□ -0.21
RORA-208ENST00000558904 DCCP43146 1447 aa13.74□□□□□ -0.21
RORA-208ENST00000558904 ATAD2Q6PL18 1390 aa13.74□□□□□ -0.21
RORA-208ENST00000558904 CHGAP10645 457 aaKnown RBP13.74□□□□□ -0.21
RORA-208ENST00000558904 APLP2Q06481 763 aa13.74□□□□□ -0.21
RORA-208ENST00000558904 CCDC125Q86Z20 511 aa13.74□□□□□ -0.21
RORA-208ENST00000558904 CHIC2Q9UKJ5 165 aa13.74□□□□□ -0.21
RORA-208ENST00000558904 DIP2AQ14689 1571 aa13.73□□□□□ -0.21
RORA-208ENST00000558904 CROCC2H7BZ55 1655 aa13.72□□□□□ -0.21
RORA-208ENST00000558904 RGS12O14924 1447 aa13.72□□□□□ -0.21
RORA-208ENST00000558904 ADAMTS13Q76LX8 1427 aa13.71□□□□□ -0.22
RORA-208ENST00000558904 PTPN23Q9H3S7 1636 aa13.71□□□□□ -0.22
RORA-208ENST00000558904 TRPC5Q9UL62 973 aaPredicted RBP13.7□□□□□ -0.22
RORA-208ENST00000558904 TMEM131LA2VDJ0 1609 aa13.69□□□□□ -0.22
RORA-208ENST00000558904 TRPM2O94759 1503 aa13.69□□□□□ -0.22
RORA-208ENST00000558904 ASXL1Q8IXJ9 1541 aa13.68□□□□□ -0.22
RORA-208ENST00000558904 GCC2Q8IWJ2 1684 aa13.67□□□□□ -0.22
RORA-208ENST00000558904 USP21Q9UK80 565 aa13.67□□□□□ -0.22
RORA-208ENST00000558904 PNPLA6Q8IY17 1366 aa13.67□□□□□ -0.22
RORA-208ENST00000558904 MYO5BQ9ULV0 1848 aa13.67□□□□□ -0.22
RORA-208ENST00000558904 SRCAPQ6ZRS2 3230 aa13.66□□□□□ -0.22
RORA-208ENST00000558904 ANKRD50Q9ULJ7 1429 aa13.66□□□□□ -0.22
RORA-208ENST00000558904 ADAMTS2O95450 1211 aa13.66□□□□□ -0.22
RORA-208ENST00000558904 MST1RQ04912 1400 aa13.65□□□□□ -0.22
RORA-208ENST00000558904 FNBP4Q8N3X1 1017 aaPredicted RBP13.65□□□□□ -0.22
RORA-208ENST00000558904 NHSL1Q5SYE7 1610 aa13.64□□□□□ -0.23
RORA-208ENST00000558904 ADGRL2O95490 1459 aa13.64□□□□□ -0.23
RORA-208ENST00000558904 PTPRUQ92729 1446 aa13.63□□□□□ -0.23
RORA-208ENST00000558904 PTCH1Q13635 1447 aa13.62□□□□□ -0.23
RORA-208ENST00000558904 DDX17Q92841 729 aaKnown RBP13.6□□□□□ -0.23
RORA-208ENST00000558904 SOS2Q07890 1332 aaPredicted RBP13.6□□□□□ -0.23
RORA-208ENST00000558904 ADGRL3Q9HAR2 1447 aa13.59□□□□□ -0.23
RORA-208ENST00000558904 FAM50AQ14320 339 aaKnown RBP13.58□□□□□ -0.24
RORA-208ENST00000558904 UNC13BO14795 1591 aa13.58□□□□□ -0.24
RORA-208ENST00000558904 ATRNO75882 1429 aa13.57□□□□□ -0.24
RORA-208ENST00000558904 ZNF326Q5BKZ1 582 aaKnown RBP13.57□□□□□ -0.24
RORA-208ENST00000558904 XRN1Q8IZH2 1706 aaKnown RBP13.56□□□□□ -0.24
RORA-208ENST00000558904 C1orf167Q5SNV9 1468 aa13.56□□□□□ -0.24
RORA-208ENST00000558904 SF3B2Q13435 895 aaKnown RBP13.56□□□□□ -0.24
RORA-208ENST00000558904 GJD4Q96KN9 370 aaPredicted RBP13.56□□□□□ -0.24
RORA-208ENST00000558904 SETBP1Q9Y6X0 1596 aa13.56□□□□□ -0.24
RORA-208ENST00000558904 METP08581 1390 aa13.55□□□□□ -0.24
RORA-208ENST00000558904 E9PCH4 1651 aa13.53□□□□□ -0.24
RORA-208ENST00000558904 ORAI2Q96SN7 254 aa13.53□□□□□ -0.24
RORA-208ENST00000558904 BLMP54132 1417 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms