RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 TMEM2Q9UHN6 1383 aa11.11□□□□□ -0.63
LRRC28-211ENST00000558890 KIF1BO60333 1816 aa11.11□□□□□ -0.63
LRRC28-211ENST00000558890 MED14O60244 1454 aa11.11□□□□□ -0.63
LRRC28-211ENST00000558890 UBR1Q8IWV7 1749 aa11.1□□□□□ -0.63
LRRC28-211ENST00000558890 ZFYVE9O95405 1425 aa11.09□□□□□ -0.63
LRRC28-211ENST00000558890 DIEXFQ68CQ4 756 aaKnown RBP11.09□□□□□ -0.63
LRRC28-211ENST00000558890 CLTCL1P53675 1640 aa11.09□□□□□ -0.63
LRRC28-211ENST00000558890 CCDC144AA2RUR9 1427 aa11.09□□□□□ -0.63
LRRC28-211ENST00000558890 TXNDC2Q86VQ3 553 aa11.08□□□□□ -0.64
LRRC28-211ENST00000558890 ADGRB3O60242 1522 aa11.08□□□□□ -0.64
LRRC28-211ENST00000558890 TMEM131LA2VDJ0 1609 aa11.07□□□□□ -0.64
LRRC28-211ENST00000558890 TIMELESSQ9UNS1 1208 aa11.07□□□□□ -0.64
LRRC28-211ENST00000558890 STAC3Q96MF2 364 aa11.06□□□□□ -0.64
LRRC28-211ENST00000558890 NPHP4O75161 1426 aaPredicted RBP11.05□□□□□ -0.64
LRRC28-211ENST00000558890 IFT172Q9UG01 1749 aa11.05□□□□□ -0.64
LRRC28-211ENST00000558890 SCAF11Q99590 1463 aaKnown RBP11.05□□□□□ -0.64
LRRC28-211ENST00000558890 RIMS2Q9UQ26 1411 aa11.04□□□□□ -0.64
LRRC28-211ENST00000558890 NPM3O75607 178 aaKnown RBP11.04□□□□□ -0.64
LRRC28-211ENST00000558890 STAG3Q9UJ98 1225 aa11.04□□□□□ -0.64
LRRC28-211ENST00000558890 LTBP4Q8N2S1 1624 aa11.04□□□□□ -0.64
LRRC28-211ENST00000558890 SPATA31E1Q6ZUB1 1445 aa11.03□□□□□ -0.64
LRRC28-211ENST00000558890 EID1Q9Y6B2 187 aa11.03□□□□□ -0.64
LRRC28-211ENST00000558890 ZNF335Q9H4Z2 1342 aaPredicted RBP11.03□□□□□ -0.64
LRRC28-211ENST00000558890 PPLO60437 1756 aa11.02□□□□□ -0.65
LRRC28-211ENST00000558890 MYOM2P54296 1465 aa11.01□□□□□ -0.65
LRRC28-211ENST00000558890 MYO5BQ9ULV0 1848 aa11.01□□□□□ -0.65
LRRC28-211ENST00000558890 CHGAP10645 457 aaKnown RBP11.01□□□□□ -0.65
LRRC28-211ENST00000558890 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.01□□□□□ -0.65
LRRC28-211ENST00000558890 RPGRIP1LQ68CZ1 1315 aa11.01□□□□□ -0.65
LRRC28-211ENST00000558890 PLEKHG1Q9ULL1 1385 aa11.01□□□□□ -0.65
LRRC28-211ENST00000558890 ADAMTS13Q76LX8 1427 aa11.01□□□□□ -0.65
LRRC28-211ENST00000558890 LAMC1P11047 1609 aa11□□□□□ -0.65
LRRC28-211ENST00000558890 NUTM2DQ5VT03 806 aaPredicted RBP11□□□□□ -0.65
LRRC28-211ENST00000558890 CERKQ8TCT0 537 aa11□□□□□ -0.65
LRRC28-211ENST00000558890 TBX22Q9Y458 520 aa11□□□□□ -0.65
LRRC28-211ENST00000558890 HDGFP51858 240 aaKnown RBP10.99□□□□□ -0.65
LRRC28-211ENST00000558890 SLC26A8Q96RN1 970 aa10.99□□□□□ -0.65
LRRC28-211ENST00000558890 NEXMIFQ5QGS0 1516 aa10.99□□□□□ -0.65
LRRC28-211ENST00000558890 POLR1AO95602 1720 aaPredicted RBP10.98□□□□□ -0.65
LRRC28-211ENST00000558890 KIAA1210Q9ULL0 1709 aa10.98□□□□□ -0.65
LRRC28-211ENST00000558890 NRXN1Q9ULB1 1477 aa10.98□□□□□ -0.65
LRRC28-211ENST00000558890 CENPBP07199 599 aaPredicted RBP10.97□□□□□ -0.65
LRRC28-211ENST00000558890 KCNA6P17658 529 aa10.97□□□□□ -0.65
LRRC28-211ENST00000558890 IQGAP1P46940 1657 aa10.97□□□□□ -0.65
LRRC28-211ENST00000558890 DIP2AQ14689 1571 aa10.96□□□□□ -0.65
LRRC28-211ENST00000558890 ZNF326Q5BKZ1 582 aaKnown RBP10.96□□□□□ -0.65
LRRC28-211ENST00000558890 ADGRF5Q8IZF2 1346 aa10.95□□□□□ -0.66
LRRC28-211ENST00000558890 VGFO15240 615 aaPredicted RBP10.95□□□□□ -0.66
LRRC28-211ENST00000558890 RGL3Q3MIN7 710 aa10.95□□□□□ -0.66
LRRC28-211ENST00000558890 STRCP1A6NGW2 1772 aa10.95□□□□□ -0.66
LRRC28-211ENST00000558890 SETBP1Q9Y6X0 1596 aa10.94□□□□□ -0.66
LRRC28-211ENST00000558890 PTPRUQ92729 1446 aa10.94□□□□□ -0.66
LRRC28-211ENST00000558890 NRXN3Q9Y4C0 1643 aa10.94□□□□□ -0.66
LRRC28-211ENST00000558890 METP08581 1390 aa10.93□□□□□ -0.66
LRRC28-211ENST00000558890 TONSLQ96HA7 1378 aa10.93□□□□□ -0.66
LRRC28-211ENST00000558890 PPP1R15AO75807 674 aaPredicted RBP10.93□□□□□ -0.66
LRRC28-211ENST00000558890 RNF216Q9NWF9 866 aaPredicted RBP10.93□□□□□ -0.66
LRRC28-211ENST00000558890 LRRC7Q96NW7 1537 aa10.93□□□□□ -0.66
LRRC28-211ENST00000558890 PIK3R4Q99570 1358 aa10.92□□□□□ -0.66
LRRC28-211ENST00000558890 PIK3C2GO75747 1445 aa10.92□□□□□ -0.66
LRRC28-211ENST00000558890 SIN3AQ96ST3 1273 aa10.91□□□□□ -0.66
LRRC28-211ENST00000558890 IQSEC2Q5JU85 1478 aa10.91□□□□□ -0.66
LRRC28-211ENST00000558890 PRAG1Q86YV5 1406 aa10.91□□□□□ -0.66
LRRC28-211ENST00000558890 CPS1P31327 1500 aa10.9□□□□□ -0.66
LRRC28-211ENST00000558890 SETD1AO15047 1707 aaKnown RBP10.9□□□□□ -0.66
LRRC28-211ENST00000558890 ILDR1Q86SU0 546 aaPredicted RBP10.9□□□□□ -0.66
LRRC28-211ENST00000558890 FBXO41Q8TF61 875 aa10.9□□□□□ -0.66
LRRC28-211ENST00000558890 C14orf93Q9H972 538 aaKnown RBP10.9□□□□□ -0.66
LRRC28-211ENST00000558890 TRPM1Q7Z4N2 1603 aa10.9□□□□□ -0.66
LRRC28-211ENST00000558890 AMOTL2Q9Y2J4 779 aa10.89□□□□□ -0.67
LRRC28-211ENST00000558890 CHD2O14647 1828 aaKnown RBP10.88□□□□□ -0.67
LRRC28-211ENST00000558890 ALKQ9UM73 1620 aa10.88□□□□□ -0.67
LRRC28-211ENST00000558890 NWD1Q149M9 1564 aa10.88□□□□□ -0.67
LRRC28-211ENST00000558890 BCANQ96GW7 911 aa10.88□□□□□ -0.67
LRRC28-211ENST00000558890 RALGAPBQ86X10 1494 aa10.87□□□□□ -0.67
LRRC28-211ENST00000558890 KNDC1Q76NI1 1749 aa10.87□□□□□ -0.67
LRRC28-211ENST00000558890 DCAF11Q8TEB1 546 aa10.87□□□□□ -0.67
LRRC28-211ENST00000558890 RBM33Q96EV2 1170 aaKnown RBP10.87□□□□□ -0.67
LRRC28-211ENST00000558890 TMEM94Q12767 1356 aa10.87□□□□□ -0.67
LRRC28-211ENST00000558890 HOXD11P31277 338 aaPredicted RBP10.86□□□□□ -0.67
LRRC28-211ENST00000558890 CFAP70Q5T0N1 1121 aa10.86□□□□□ -0.67
LRRC28-211ENST00000558890 PROSER2Q86WR7 435 aaPredicted RBP10.86□□□□□ -0.67
LRRC28-211ENST00000558890 L3MBTL2Q969R5 705 aa10.86□□□□□ -0.67
LRRC28-211ENST00000558890 GPRASP1Q5JY77 1395 aa10.86□□□□□ -0.67
LRRC28-211ENST00000558890 NCOA3Q9Y6Q9 1424 aa10.85□□□□□ -0.67
LRRC28-211ENST00000558890 XIRP1Q702N8 1843 aaKnown RBP10.85□□□□□ -0.67
LRRC28-211ENST00000558890 NKTRP30414 1462 aaKnown RBP10.85□□□□□ -0.67
LRRC28-211ENST00000558890 TMEM132EQ6IEE7 984 aa10.84□□□□□ -0.67
LRRC28-211ENST00000558890 KDM2AQ9Y2K7 1162 aa10.84□□□□□ -0.67
LRRC28-211ENST00000558890 ABCC11Q96J66 1382 aa10.84□□□□□ -0.67
LRRC28-211ENST00000558890 ROBO2Q9HCK4 1378 aa10.84□□□□□ -0.67
LRRC28-211ENST00000558890 ADGRB1O14514 1584 aa10.84□□□□□ -0.67
LRRC28-211ENST00000558890 ASXL1Q8IXJ9 1541 aa10.84□□□□□ -0.67
LRRC28-211ENST00000558890 NEUROD1Q13562 356 aa10.83□□□□□ -0.68
LRRC28-211ENST00000558890 SIRT1Q96EB6 747 aa10.83□□□□□ -0.68
LRRC28-211ENST00000558890 XRN1Q8IZH2 1706 aaKnown RBP10.83□□□□□ -0.68
LRRC28-211ENST00000558890 DLC1Q96QB1 1528 aa10.83□□□□□ -0.68
LRRC28-211ENST00000558890 TECPR2O15040 1411 aa10.83□□□□□ -0.68
LRRC28-211ENST00000558890 LRPPRCP42704 1394 aaKnown RBP10.82□□□□□ -0.68
LRRC28-211ENST00000558890 MIER1Q8N108 512 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms