RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 LTBP4Q8N2S1 1624 aa9.13□□□□□ -0.95
LRRC28-208ENST00000558771 KDM5CP41229 1560 aa9.13□□□□□ -0.95
LRRC28-208ENST00000558771 AFAP1Q8N556 730 aa9.13□□□□□ -0.95
LRRC28-208ENST00000558771 PCDH10Q9P2E7 1040 aa9.13□□□□□ -0.95
LRRC28-208ENST00000558771 C3P01024 1663 aa9.13□□□□□ -0.95
LRRC28-208ENST00000558771 DIP2CQ9Y2E4 1556 aa9.12□□□□□ -0.95
LRRC28-208ENST00000558771 MYT1LQ9UL68 1186 aa9.12□□□□□ -0.95
LRRC28-208ENST00000558771 EEA1Q15075 1411 aa9.12□□□□□ -0.95
LRRC28-208ENST00000558771 KIF14Q15058 1648 aa9.12□□□□□ -0.95
LRRC28-208ENST00000558771 REREQ9P2R6 1566 aa9.12□□□□□ -0.95
LRRC28-208ENST00000558771 TMEM92Q6UXU6 159 aa9.11□□□□□ -0.95
LRRC28-208ENST00000558771 ATP1B4Q9UN42 357 aaPredicted RBP9.11□□□□□ -0.95
LRRC28-208ENST00000558771 ARHGAP5Q13017 1502 aa9.1□□□□□ -0.95
LRRC28-208ENST00000558771 IQSEC2Q5JU85 1478 aa9.1□□□□□ -0.95
LRRC28-208ENST00000558771 ABCA6Q8N139 1617 aa9.1□□□□□ -0.95
LRRC28-208ENST00000558771 TRAPPC8Q9Y2L5 1435 aa9.1□□□□□ -0.95
LRRC28-208ENST00000558771 NCOA1Q15788 1441 aa9.09□□□□□ -0.95
LRRC28-208ENST00000558771 ESF1Q9H501 851 aaKnown RBP9.09□□□□□ -0.95
LRRC28-208ENST00000558771 CDK11AQ9UQ88 783 aaPredicted RBP9.09□□□□□ -0.95
LRRC28-208ENST00000558771 AGLP35573 1532 aa9.09□□□□□ -0.95
LRRC28-208ENST00000558771 MLH3Q9UHC1 1453 aa9.08□□□□□ -0.96
LRRC28-208ENST00000558771 TROQ12816 1431 aaPredicted RBP9.08□□□□□ -0.96
LRRC28-208ENST00000558771 FAM163AQ96GL9 167 aaPredicted RBP9.08□□□□□ -0.96
LRRC28-208ENST00000558771 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.08□□□□□ -0.96
LRRC28-208ENST00000558771 CDC42BPBQ9Y5S2 1711 aa9.08□□□□□ -0.96
LRRC28-208ENST00000558771 FMN1Q68DA7 1419 aa9.07□□□□□ -0.96
LRRC28-208ENST00000558771 SNPHO15079 494 aa9.07□□□□□ -0.96
LRRC28-208ENST00000558771 CAMSAP1Q5T5Y3 1602 aa9.06□□□□□ -0.96
LRRC28-208ENST00000558771 ARHGAP35Q9NRY4 1499 aa9.06□□□□□ -0.96
LRRC28-208ENST00000558771 CLIP1P30622 1438 aa9.05□□□□□ -0.96
LRRC28-208ENST00000558771 CNTLNQ9NXG0 1405 aa9.05□□□□□ -0.96
LRRC28-208ENST00000558771 ABCC1P33527 1531 aa9.05□□□□□ -0.96
LRRC28-208ENST00000558771 KIDINS220Q9ULH0 1771 aa9.05□□□□□ -0.96
LRRC28-208ENST00000558771 ITSN2Q9NZM3 1697 aa9.05□□□□□ -0.96
LRRC28-208ENST00000558771 SPRYD3Q8NCJ5 442 aa9.05□□□□□ -0.96
LRRC28-208ENST00000558771 LRRIQ1Q96JM4 1722 aa9.05□□□□□ -0.96
LRRC28-208ENST00000558771 ZNF335Q9H4Z2 1342 aaPredicted RBP9.05□□□□□ -0.96
LRRC28-208ENST00000558771 NCKAP5LQ9HCH0 1330 aa9.05□□□□□ -0.96
LRRC28-208ENST00000558771 UBAP1LF5GYI3 381 aa9.04□□□□□ -0.96
LRRC28-208ENST00000558771 PREX2Q70Z35 1606 aa9.04□□□□□ -0.96
LRRC28-208ENST00000558771 NPATQ14207 1427 aa9.04□□□□□ -0.96
LRRC28-208ENST00000558771 C2orf72A6NCS6 295 aa9.03□□□□□ -0.96
LRRC28-208ENST00000558771 KIF3CO14782 793 aa9.03□□□□□ -0.96
LRRC28-208ENST00000558771 MROH2AA6NES4 1674 aa9.03□□□□□ -0.96
LRRC28-208ENST00000558771 ZMYM3Q14202 1370 aa9.02□□□□□ -0.97
LRRC28-208ENST00000558771 UBTFP17480 764 aaKnown RBP9.02□□□□□ -0.97
LRRC28-208ENST00000558771 PAXIP1Q6ZW49 1069 aaPredicted RBP9.02□□□□□ -0.97
LRRC28-208ENST00000558771 TMC2Q8TDI7 906 aa9.02□□□□□ -0.97
LRRC28-208ENST00000558771 LCE2DQ5TA82 110 aaPredicted RBP9.01□□□□□ -0.97
LRRC28-208ENST00000558771 ZNF142P52746 1687 aaPredicted RBP9□□□□□ -0.97
LRRC28-208ENST00000558771 CDC42BPAQ5VT25 1732 aa9□□□□□ -0.97
LRRC28-208ENST00000558771 SAMD9LQ8IVG5 1584 aa9□□□□□ -0.97
LRRC28-208ENST00000558771 ST18O60284 1047 aa9□□□□□ -0.97
LRRC28-208ENST00000558771 HOXB3P14651 431 aaPredicted RBP9□□□□□ -0.97
LRRC28-208ENST00000558771 CFAP44Q96MT7 982 aa9□□□□□ -0.97
LRRC28-208ENST00000558771 MYO3AQ8NEV4 1616 aa9□□□□□ -0.97
LRRC28-208ENST00000558771 PLA2R1Q13018 1463 aa9□□□□□ -0.97
LRRC28-208ENST00000558771 SUPT6HQ7KZ85 1726 aaKnown RBP9□□□□□ -0.97
LRRC28-208ENST00000558771 TCOF1Q13428 1488 aaKnown RBP8.99□□□□□ -0.97
LRRC28-208ENST00000558771 CLTCQ00610 1675 aaKnown RBP8.99□□□□□ -0.97
LRRC28-208ENST00000558771 CEP170BQ9Y4F5 1589 aaPredicted RBP8.99□□□□□ -0.97
LRRC28-208ENST00000558771 PTPRKQ15262 1439 aa8.98□□□□□ -0.97
LRRC28-208ENST00000558771 GPHNQ9NQX3 736 aaPredicted RBP8.98□□□□□ -0.97
LRRC28-208ENST00000558771 ZNF777Q9ULD5 760 aaPredicted RBP8.98□□□□□ -0.97
LRRC28-208ENST00000558771 SYCP2Q9BX26 1530 aa8.98□□□□□ -0.97
LRRC28-208ENST00000558771 MED1Q15648 1581 aaPredicted RBP8.98□□□□□ -0.97
LRRC28-208ENST00000558771 CCDC18Q5T9S5 1454 aa8.97□□□□□ -0.97
LRRC28-208ENST00000558771 HSPA1LP34931 641 aa8.97□□□□□ -0.97
LRRC28-208ENST00000558771 DOK7Q18PE1 504 aa8.97□□□□□ -0.97
LRRC28-208ENST00000558771 SPAG9O60271 1321 aaKnown RBP8.97□□□□□ -0.97
LRRC28-208ENST00000558771 PLXNC1O60486 1568 aa8.96□□□□□ -0.97
LRRC28-208ENST00000558771 HNRNPMP52272 730 aaKnown RBP eCLIP8.96□□□□□ -0.98
LRRC28-208ENST00000558771 CASKIN1Q8WXD9 1431 aa8.96□□□□□ -0.98
LRRC28-208ENST00000558771 A2MP01023 1474 aa8.96□□□□□ -0.98
LRRC28-208ENST00000558771 ATP7AQ04656 1500 aa8.95□□□□□ -0.98
LRRC28-208ENST00000558771 PDE4AP27815 886 aa8.95□□□□□ -0.98
LRRC28-208ENST00000558771 PIP4K2BP78356 416 aa8.95□□□□□ -0.98
LRRC28-208ENST00000558771 GGT6Q6P531 493 aa8.95□□□□□ -0.98
LRRC28-208ENST00000558771 CRISPLD2Q9H0B8 497 aa8.95□□□□□ -0.98
LRRC28-208ENST00000558771 INO80Q9ULG1 1556 aaPredicted RBP8.95□□□□□ -0.98
LRRC28-208ENST00000558771 FOXK1P85037 733 aa8.94□□□□□ -0.98
LRRC28-208ENST00000558771 ZNF710Q8N1W2 664 aa8.94□□□□□ -0.98
LRRC28-208ENST00000558771 A2ML1A8K2U0 1454 aa8.94□□□□□ -0.98
LRRC28-208ENST00000558771 GPATCH8Q9UKJ3 1502 aaKnown RBP8.94□□□□□ -0.98
LRRC28-208ENST00000558771 DNMT1P26358 1616 aaKnown RBP8.94□□□□□ -0.98
LRRC28-208ENST00000558771 TOM1O60784 492 aa8.93□□□□□ -0.98
LRRC28-208ENST00000558771 CADPS2Q86UW7 1296 aa8.93□□□□□ -0.98
LRRC28-208ENST00000558771 CPS1P31327 1500 aa8.92□□□□□ -0.98
LRRC28-208ENST00000558771 KIAA1107Q9UPP5 1409 aa8.92□□□□□ -0.98
LRRC28-208ENST00000558771 RIMBP2O15034 1052 aa8.92□□□□□ -0.98
LRRC28-208ENST00000558771 DSG2Q14126 1118 aa8.92□□□□□ -0.98
LRRC28-208ENST00000558771 PLPP6Q8IY26 295 aa8.92□□□□□ -0.98
LRRC28-208ENST00000558771 POLR1AO95602 1720 aaPredicted RBP8.91□□□□□ -0.98
LRRC28-208ENST00000558771 NEURL4Q96JN8 1562 aa8.91□□□□□ -0.98
LRRC28-208ENST00000558771 PLEKHH2Q8IVE3 1493 aa8.91□□□□□ -0.98
LRRC28-208ENST00000558771 SHANK2Q9UPX8 1470 aa8.91□□□□□ -0.98
LRRC28-208ENST00000558771 CFDP1Q9UEE9 299 aaPredicted RBP8.91□□□□□ -0.98
LRRC28-208ENST00000558771 ADGBQ8N7X0 1667 aa8.91□□□□□ -0.98
LRRC28-208ENST00000558771 FYCO1Q9BQS8 1478 aa8.9□□□□□ -0.98
LRRC28-208ENST00000558771 LARP6Q9BRS8 491 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms