RNA–Protein interactions for RNA: ENST00000558543.5

PDE8A-209, Transcript of phosphodiesterase 8A, humanhuman

TSL 3

Gene PDE8A, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-209ENST00000558543 NECTIN2Q92692 538 aa10.25□□□□□ -0.77
PDE8A-209ENST00000558543 GPR37O15354 613 aa10.23□□□□□ -0.77
PDE8A-209ENST00000558543 VSIG10Q8N0Z9 540 aa10.23□□□□□ -0.77
PDE8A-209ENST00000558543 NKX2-3Q8TAU0 364 aa10.23□□□□□ -0.77
PDE8A-209ENST00000558543 GNPATO15228 680 aa10.22□□□□□ -0.77
PDE8A-209ENST00000558543 PXYLP1Q8TE99 480 aa10.22□□□□□ -0.77
PDE8A-209ENST00000558543 OATP04181 439 aa10.2□□□□□ -0.78
PDE8A-209ENST00000558543 METTL3Q86U44 580 aaKnown RBP10.2□□□□□ -0.78
PDE8A-209ENST00000558543 GPIHBP1Q8IV16 184 aa10.2□□□□□ -0.78
PDE8A-209ENST00000558543 NLRP7Q8WX94 980 aa10.2□□□□□ -0.78
PDE8A-209ENST00000558543 IRX2Q9BZI1 471 aaPredicted RBP10.2□□□□□ -0.78
PDE8A-209ENST00000558543 PCDHB3Q9Y5E6 796 aa10.2□□□□□ -0.78
PDE8A-209ENST00000558543 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.19□□□□□ -0.78
PDE8A-209ENST00000558543 CFHP08603 1231 aa10.19□□□□□ -0.78
PDE8A-209ENST00000558543 PPP1R18Q6NYC8 613 aa10.19□□□□□ -0.78
PDE8A-209ENST00000558543 BLOC1S3Q6QNY0 202 aa10.19□□□□□ -0.78
PDE8A-209ENST00000558543 SLC10A3P09131 477 aa10.18□□□□□ -0.78
PDE8A-209ENST00000558543 PRR14Q9BWN1 585 aa10.18□□□□□ -0.78
PDE8A-209ENST00000558543 ZPR1O75312 459 aa10.16□□□□□ -0.78
PDE8A-209ENST00000558543 TLL1O43897 1013 aa10.15□□□□□ -0.78
PDE8A-209ENST00000558543 KMT5BQ4FZB7 885 aa10.15□□□□□ -0.78
PDE8A-209ENST00000558543 PRKD2Q9BZL6 878 aa10.13□□□□□ -0.79
PDE8A-209ENST00000558543 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.13□□□□□ -0.79
PDE8A-209ENST00000558543 ACTN4O43707 911 aaKnown RBP10.12□□□□□ -0.79
PDE8A-209ENST00000558543 PHOX2BQ99453 314 aa10.12□□□□□ -0.79
PDE8A-209ENST00000558543 RDH13Q8NBN7 331 aa10.11□□□□□ -0.79
PDE8A-209ENST00000558543 DDX11L8A8MPP1 907 aa10.1□□□□□ -0.79
PDE8A-209ENST00000558543 TULP1O00294 542 aaPredicted RBP10.1□□□□□ -0.79
PDE8A-209ENST00000558543 PUS10Q3MIT2 529 aaKnown RBP10.09□□□□□ -0.79
PDE8A-209ENST00000558543 GGCXP38435 758 aa10.08□□□□□ -0.8
PDE8A-209ENST00000558543 RSPH4AQ5TD94 716 aa10.08□□□□□ -0.8
PDE8A-209ENST00000558543 DAXXQ9UER7 740 aaPredicted RBP10.08□□□□□ -0.8
PDE8A-209ENST00000558543 NR1I2O75469 434 aa10.05□□□□□ -0.8
PDE8A-209ENST00000558543 RNF223E7ERA6 249 aa10.04□□□□□ -0.8
PDE8A-209ENST00000558543 PPEF1O14829 653 aaPredicted RBP10.04□□□□□ -0.8
PDE8A-209ENST00000558543 S1PR4O95977 384 aa10.04□□□□□ -0.8
PDE8A-209ENST00000558543 Q6ZNB5 142 aa10.04□□□□□ -0.8
PDE8A-209ENST00000558543 MAP2K5Q13163 448 aa10.03□□□□□ -0.8
PDE8A-209ENST00000558543 SCUBE3Q8IX30 993 aa10.03□□□□□ -0.8
PDE8A-209ENST00000558543 GFRA3O60609 400 aa10.02□□□□□ -0.81
PDE8A-209ENST00000558543 FUT2Q10981 343 aa10.02□□□□□ -0.81
PDE8A-209ENST00000558543 TMUB1Q9BVT8 246 aa10.02□□□□□ -0.81
PDE8A-209ENST00000558543 V9GY48 417 aaPredicted RBP10.02□□□□□ -0.81
PDE8A-209ENST00000558543 ADH1BP00325 375 aa10.01□□□□□ -0.81
PDE8A-209ENST00000558543 IRF6O14896 467 aa10□□□□□ -0.81
PDE8A-209ENST00000558543 SULF1Q8IWU6 871 aa10□□□□□ -0.81
PDE8A-209ENST00000558543 GCGRP47871 477 aa9.99□□□□□ -0.81
PDE8A-209ENST00000558543 MDM2Q00987 491 aaPredicted RBP9.98□□□□□ -0.81
PDE8A-209ENST00000558543 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.98□□□□□ -0.81
PDE8A-209ENST00000558543 CCDC102AQ96A19 550 aa9.98□□□□□ -0.81
PDE8A-209ENST00000558543 EMID1Q96A84 441 aaPredicted RBP9.98□□□□□ -0.81
PDE8A-209ENST00000558543 SLC6A16Q9GZN6 736 aa9.98□□□□□ -0.81
PDE8A-209ENST00000558543 SLC19A1P41440 591 aa9.97□□□□□ -0.81
PDE8A-209ENST00000558543 MORN1Q5T089 497 aa9.97□□□□□ -0.81
PDE8A-209ENST00000558543 SPSB2Q99619 263 aa9.97□□□□□ -0.81
PDE8A-209ENST00000558543 ATP6V1AP38606 617 aa9.96□□□□□ -0.82
PDE8A-209ENST00000558543 SLC27A5Q9Y2P5 690 aa9.96□□□□□ -0.82
PDE8A-209ENST00000558543 LAPTM4AQ15012 233 aa9.95□□□□□ -0.82
PDE8A-209ENST00000558543 LMOD2Q6P5Q4 547 aa9.95□□□□□ -0.82
PDE8A-209ENST00000558543 ANKLE1Q8NAG6 615 aa9.95□□□□□ -0.82
PDE8A-209ENST00000558543 PDZRN3Q9UPQ7 1066 aa9.95□□□□□ -0.82
PDE8A-209ENST00000558543 MINK1Q8N4C8 1332 aaPredicted RBP9.95□□□□□ -0.82
PDE8A-209ENST00000558543 PLA2G2CQ5R387 149 aa9.93□□□□□ -0.82
PDE8A-209ENST00000558543 LIAT1Q6ZQX7 453 aa9.93□□□□□ -0.82
PDE8A-209ENST00000558543 NRG2O14511 850 aaPredicted RBP9.92□□□□□ -0.82
PDE8A-209ENST00000558543 CD46P15529 392 aa9.92□□□□□ -0.82
PDE8A-209ENST00000558543 LCE2BO14633 110 aa9.91□□□□□ -0.82
PDE8A-209ENST00000558543 THAP11Q96EK4 314 aa9.91□□□□□ -0.82
PDE8A-209ENST00000558543 PRDM9Q9NQV7 894 aa9.91□□□□□ -0.82
PDE8A-209ENST00000558543 FMNL1O95466 1100 aaPredicted RBP9.9□□□□□ -0.82
PDE8A-209ENST00000558543 SPRYD7Q5W111 196 aa9.9□□□□□ -0.82
PDE8A-209ENST00000558543 RNF19BQ6ZMZ0 732 aa9.9□□□□□ -0.82
PDE8A-209ENST00000558543 TRIM67Q6ZTA4 783 aa9.89□□□□□ -0.83
PDE8A-209ENST00000558543 FAM160A2Q8N612 972 aaPredicted RBP9.89□□□□□ -0.83
PDE8A-209ENST00000558543 KRI1Q8N9T8 703 aaKnown RBP9.89□□□□□ -0.83
PDE8A-209ENST00000558543 ZNF697Q5TEC3 545 aa9.88□□□□□ -0.83
PDE8A-209ENST00000558543 HLA-CQ95604 372 aa9.88□□□□□ -0.83
PDE8A-209ENST00000558543 KDM4AO75164 1064 aa9.87□□□□□ -0.83
PDE8A-209ENST00000558543 GRIPAP1Q4V328 841 aa9.87□□□□□ -0.83
PDE8A-209ENST00000558543 BRICD5Q6PL45 260 aa9.87□□□□□ -0.83
PDE8A-209ENST00000558543 TRAF7Q6Q0C0 670 aa9.87□□□□□ -0.83
PDE8A-209ENST00000558543 ZNF598Q86UK7 904 aaKnown RBP9.87□□□□□ -0.83
PDE8A-209ENST00000558543 GPCPD1Q9NPB8 672 aa9.87□□□□□ -0.83
PDE8A-209ENST00000558543 FCF1Q9Y324 198 aaKnown RBP9.87□□□□□ -0.83
PDE8A-209ENST00000558543 CLCN1P35523 988 aa9.86□□□□□ -0.83
PDE8A-209ENST00000558543 TNFRSF10AO00220 468 aa9.85□□□□□ -0.83
PDE8A-209ENST00000558543 ZC3H15Q8WU90 426 aaKnown RBP9.84□□□□□ -0.83
PDE8A-209ENST00000558543 REPIN1Q9BWE0 567 aaKnown RBP9.84□□□□□ -0.83
PDE8A-209ENST00000558543 FAM217BQ9NTX9 383 aaPredicted RBP9.84□□□□□ -0.83
PDE8A-209ENST00000558543 GUCA2AQ02747 115 aa9.83□□□□□ -0.84
PDE8A-209ENST00000558543 BARGINQ6ZT62 677 aa9.83□□□□□ -0.84
PDE8A-209ENST00000558543 SALL2Q9Y467 1007 aaPredicted RBP9.83□□□□□ -0.84
PDE8A-209ENST00000558543 ZMYND10O75800 440 aa9.82□□□□□ -0.84
PDE8A-209ENST00000558543 Q3C1V9 767 aa9.82□□□□□ -0.84
PDE8A-209ENST00000558543 HOXA2O43364 376 aa9.81□□□□□ -0.84
PDE8A-209ENST00000558543 FOXC1Q12948 553 aa9.81□□□□□ -0.84
PDE8A-209ENST00000558543 TTLL12Q14166 644 aaPredicted RBP9.81□□□□□ -0.84
PDE8A-209ENST00000558543 USP46P62068 366 aa9.8□□□□□ -0.84
PDE8A-209ENST00000558543 MSS51Q4VC12 460 aa9.8□□□□□ -0.84
PDE8A-209ENST00000558543 NUTM1Q86Y26 1132 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms