RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 WBP1LQ9NX94 342 aa6.72□□□□□ -1.33
HERC1-203ENST00000558532 HPS5Q9UPZ3 1129 aa6.72□□□□□ -1.33
HERC1-203ENST00000558532 TSR3Q9UJK0 312 aaKnown RBP6.7□□□□□ -1.34
HERC1-203ENST00000558532 RNF40O75150 1001 aa6.69□□□□□ -1.34
HERC1-203ENST00000558532 KRI1Q8N9T8 703 aaKnown RBP6.69□□□□□ -1.34
HERC1-203ENST00000558532 HDGFP51858 240 aaKnown RBP6.68□□□□□ -1.34
HERC1-203ENST00000558532 SLF2Q8IX21 1173 aa6.68□□□□□ -1.34
HERC1-203ENST00000558532 SLC10A3P09131 477 aa6.67□□□□□ -1.34
HERC1-203ENST00000558532 PPP4CP60510 307 aa6.67□□□□□ -1.34
HERC1-203ENST00000558532 TMUB1Q9BVT8 246 aa6.67□□□□□ -1.34
HERC1-203ENST00000558532 SLC24A3Q9HC58 644 aa6.67□□□□□ -1.34
HERC1-203ENST00000558532 DAXXQ9UER7 740 aaPredicted RBP6.67□□□□□ -1.34
HERC1-203ENST00000558532 APLP1P51693 650 aa6.66□□□□□ -1.34
HERC1-203ENST00000558532 MDM2Q00987 491 aaPredicted RBP6.66□□□□□ -1.34
HERC1-203ENST00000558532 AMHR2Q16671 573 aa6.66□□□□□ -1.34
HERC1-203ENST00000558532 NYAP1Q6ZVC0 841 aa6.66□□□□□ -1.34
HERC1-203ENST00000558532 REPIN1Q9BWE0 567 aaKnown RBP6.66□□□□□ -1.34
HERC1-203ENST00000558532 TRIM66O15016 1216 aa6.65□□□□□ -1.34
HERC1-203ENST00000558532 AK7Q96M32 723 aa6.65□□□□□ -1.34
HERC1-203ENST00000558532 GPCPD1Q9NPB8 672 aa6.64□□□□□ -1.35
HERC1-203ENST00000558532 DDX11L8A8MPP1 907 aa6.63□□□□□ -1.35
HERC1-203ENST00000558532 CFHP08603 1231 aa6.63□□□□□ -1.35
HERC1-203ENST00000558532 SLC4A3P48751 1232 aa6.63□□□□□ -1.35
HERC1-203ENST00000558532 NECTIN2Q92692 538 aa6.63□□□□□ -1.35
HERC1-203ENST00000558532 CLCN1P35523 988 aa6.62□□□□□ -1.35
HERC1-203ENST00000558532 SULF1Q8IWU6 871 aa6.62□□□□□ -1.35
HERC1-203ENST00000558532 PARP9Q8IXQ6 854 aa6.62□□□□□ -1.35
HERC1-203ENST00000558532 FAM217BQ9NTX9 383 aaPredicted RBP6.62□□□□□ -1.35
HERC1-203ENST00000558532 ITGBL1O95965 494 aaPredicted RBP6.61□□□□□ -1.35
HERC1-203ENST00000558532 CD46P15529 392 aa6.61□□□□□ -1.35
HERC1-203ENST00000558532 TTLL12Q14166 644 aaPredicted RBP6.61□□□□□ -1.35
HERC1-203ENST00000558532 TPRNQ4KMQ1 711 aa6.61□□□□□ -1.35
HERC1-203ENST00000558532 RDH13Q8NBN7 331 aa6.61□□□□□ -1.35
HERC1-203ENST00000558532 ACTN4O43707 911 aaKnown RBP6.6□□□□□ -1.35
HERC1-203ENST00000558532 PDE4DQ08499 809 aa6.6□□□□□ -1.35
HERC1-203ENST00000558532 TJAP1Q5JTD0 557 aa6.6□□□□□ -1.35
HERC1-203ENST00000558532 GIGYF2Q6Y7W6 1299 aaKnown RBP6.6□□□□□ -1.35
HERC1-203ENST00000558532 GCGRP47871 477 aa6.59□□□□□ -1.35
HERC1-203ENST00000558532 KMT5BQ4FZB7 885 aa6.59□□□□□ -1.35
HERC1-203ENST00000558532 MTRQ99707 1265 aa6.59□□□□□ -1.35
HERC1-203ENST00000558532 PRR14Q9BWN1 585 aa6.59□□□□□ -1.35
HERC1-203ENST00000558532 PLA2G2EQ9NZK7 142 aa6.59□□□□□ -1.35
HERC1-203ENST00000558532 RSPH4AQ5TD94 716 aa6.58□□□□□ -1.36
HERC1-203ENST00000558532 PCDHB3Q9Y5E6 796 aa6.58□□□□□ -1.36
HERC1-203ENST00000558532 MS4A1P11836 297 aa6.57□□□□□ -1.36
HERC1-203ENST00000558532 SSTR3P32745 418 aaPredicted RBP6.57□□□□□ -1.36
HERC1-203ENST00000558532 FUT2Q10981 343 aa6.57□□□□□ -1.36
HERC1-203ENST00000558532 IFFO2Q5TF58 517 aa6.57□□□□□ -1.36
HERC1-203ENST00000558532 BLOC1S3Q6QNY0 202 aa6.57□□□□□ -1.36
HERC1-203ENST00000558532 COPS2P61201 443 aa6.56□□□□□ -1.36
HERC1-203ENST00000558532 ZNF516Q92618 1163 aa6.56□□□□□ -1.36
HERC1-203ENST00000558532 IL21Q9HBE4 155 aa6.56□□□□□ -1.36
HERC1-203ENST00000558532 PRKCSHP14314 528 aaPredicted RBP6.55□□□□□ -1.36
HERC1-203ENST00000558532 KCNC4Q03721 635 aa6.55□□□□□ -1.36
HERC1-203ENST00000558532 PUS10Q3MIT2 529 aaKnown RBP6.55□□□□□ -1.36
HERC1-203ENST00000558532 MORN1Q5T089 497 aa6.54□□□□□ -1.36
HERC1-203ENST00000558532 GPBP1L1Q9HC44 474 aaPredicted RBP6.54□□□□□ -1.36
HERC1-203ENST00000558532 TLL1O43897 1013 aa6.53□□□□□ -1.36
HERC1-203ENST00000558532 KDM4AO75164 1064 aa6.53□□□□□ -1.36
HERC1-203ENST00000558532 ZPR1O75312 459 aa6.53□□□□□ -1.36
HERC1-203ENST00000558532 ATP6V1AP38606 617 aa6.53□□□□□ -1.36
HERC1-203ENST00000558532 HLA-CQ95604 372 aa6.53□□□□□ -1.36
HERC1-203ENST00000558532 HOXA2O43364 376 aa6.52□□□□□ -1.37
HERC1-203ENST00000558532 NKX2-3Q8TAU0 364 aa6.52□□□□□ -1.37
HERC1-203ENST00000558532 BEGAINQ9BUH8 593 aa6.52□□□□□ -1.37
HERC1-203ENST00000558532 A0A0G2JS52 829 aa6.51□□□□□ -1.37
HERC1-203ENST00000558532 SCUBE3Q8IX30 993 aa6.51□□□□□ -1.37
HERC1-203ENST00000558532 SPIRE2Q8WWL2 714 aa6.51□□□□□ -1.37
HERC1-203ENST00000558532 KDM4CQ9H3R0 1056 aa6.51□□□□□ -1.37
HERC1-203ENST00000558532 SLC27A5Q9Y2P5 690 aa6.51□□□□□ -1.37
HERC1-203ENST00000558532 NR1I2O75469 434 aa6.5□□□□□ -1.37
HERC1-203ENST00000558532 USP46P62068 366 aa6.5□□□□□ -1.37
HERC1-203ENST00000558532 GUCA2AQ02747 115 aa6.5□□□□□ -1.37
HERC1-203ENST00000558532 THAP11Q96EK4 314 aa6.5□□□□□ -1.37
HERC1-203ENST00000558532 BRPF1P55201 1214 aaPredicted RBP6.49□□□□□ -1.37
HERC1-203ENST00000558532 GRIPAP1Q4V328 841 aa6.48□□□□□ -1.37
HERC1-203ENST00000558532 RNF19BQ6ZMZ0 732 aa6.48□□□□□ -1.37
HERC1-203ENST00000558532 NUTM1Q86Y26 1132 aa6.48□□□□□ -1.37
HERC1-203ENST00000558532 TBC1D2Q9BYX2 928 aa6.48□□□□□ -1.37
HERC1-203ENST00000558532 MOXD2PA6NHM9 499 aa6.47□□□□□ -1.37
HERC1-203ENST00000558532 ADH1BP00325 375 aa6.47□□□□□ -1.37
HERC1-203ENST00000558532 FAM117AQ9C073 453 aa6.47□□□□□ -1.37
HERC1-203ENST00000558532 PCDHGC3Q9UN70 934 aa6.47□□□□□ -1.37
HERC1-203ENST00000558532 PLEKHG3A1L390 1219 aa6.46□□□□□ -1.38
HERC1-203ENST00000558532 NDUFV2P19404 249 aa6.46□□□□□ -1.38
HERC1-203ENST00000558532 NEUROD2Q15784 382 aa6.46□□□□□ -1.38
HERC1-203ENST00000558532 PPP1R18Q6NYC8 613 aa6.46□□□□□ -1.38
HERC1-203ENST00000558532 BRICD5Q6PL45 260 aa6.46□□□□□ -1.38
HERC1-203ENST00000558532 SPSB2Q99619 263 aa6.46□□□□□ -1.38
HERC1-203ENST00000558532 SALL2Q9Y467 1007 aaPredicted RBP6.46□□□□□ -1.38
HERC1-203ENST00000558532 FMNL1O95466 1100 aaPredicted RBP6.45□□□□□ -1.38
HERC1-203ENST00000558532 MYSM1Q5VVJ2 828 aa6.45□□□□□ -1.38
HERC1-203ENST00000558532 FAM160A2Q8N612 972 aaPredicted RBP6.45□□□□□ -1.38
HERC1-203ENST00000558532 S1PR4O95977 384 aa6.44□□□□□ -1.38
HERC1-203ENST00000558532 FDX1P10109 184 aa6.44□□□□□ -1.38
HERC1-203ENST00000558532 RSBN1LQ6PCB5 846 aaPredicted RBP6.44□□□□□ -1.38
HERC1-203ENST00000558532 PRDM9Q9NQV7 894 aa6.44□□□□□ -1.38
HERC1-203ENST00000558532 GJA5P36382 358 aa6.43□□□□□ -1.38
HERC1-203ENST00000558532 DIXDC1Q155Q3 683 aa6.43□□□□□ -1.38
HERC1-203ENST00000558532 Q3C1V9 767 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms