RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 GRPEL1Q9HAV7 217 aa14.3□□□□□ -0.12
PCAT29-201ENST00000558411 CHMP5Q9NZZ3 219 aa14.3□□□□□ -0.12
PCAT29-201ENST00000558411 ABCC2Q92887 1545 aa14.3□□□□□ -0.12
PCAT29-201ENST00000558411 NUP155O75694 1391 aa14.29□□□□□ -0.12
PCAT29-201ENST00000558411 EIF2AK4Q9P2K8 1649 aaKnown RBP14.29□□□□□ -0.12
PCAT29-201ENST00000558411 DDX11L8A8MPP1 907 aa14.29□□□□□ -0.12
PCAT29-201ENST00000558411 PANK3Q9H999 370 aa14.29□□□□□ -0.12
PCAT29-201ENST00000558411 KDM2AQ9Y2K7 1162 aa14.29□□□□□ -0.12
PCAT29-201ENST00000558411 ERBINQ96RT1 1412 aa14.29□□□□□ -0.12
PCAT29-201ENST00000558411 NUP153P49790 1475 aaKnown RBP14.29□□□□□ -0.12
PCAT29-201ENST00000558411 RAPGEF6Q8TEU7 1601 aa14.29□□□□□ -0.12
PCAT29-201ENST00000558411 CALD1Q05682 793 aaKnown RBP14.29□□□□□ -0.12
PCAT29-201ENST00000558411 DISP3Q9P2K9 1392 aa14.28□□□□□ -0.12
PCAT29-201ENST00000558411 ABCC10Q5T3U5 1492 aa14.28□□□□□ -0.12
PCAT29-201ENST00000558411 GPATCH8Q9UKJ3 1502 aaKnown RBP14.28□□□□□ -0.12
PCAT29-201ENST00000558411 TROQ12816 1431 aaPredicted RBP14.27□□□□□ -0.12
PCAT29-201ENST00000558411 NGEFQ8N5V2 710 aa14.27□□□□□ -0.12
PCAT29-201ENST00000558411 CLUAP1Q96AJ1 413 aa14.27□□□□□ -0.12
PCAT29-201ENST00000558411 TESK2Q96S53 571 aa14.27□□□□□ -0.12
PCAT29-201ENST00000558411 PIK3C2GO75747 1445 aa14.27□□□□□ -0.13
PCAT29-201ENST00000558411 CFDP1Q9UEE9 299 aaPredicted RBP14.27□□□□□ -0.13
PCAT29-201ENST00000558411 ADAMTS12P58397 1594 aa14.27□□□□□ -0.13
PCAT29-201ENST00000558411 TRIM44Q96DX7 344 aaPredicted RBP14.26□□□□□ -0.13
PCAT29-201ENST00000558411 ERBB4Q15303 1308 aa14.26□□□□□ -0.13
PCAT29-201ENST00000558411 SCAPERQ9BY12 1400 aa14.26□□□□□ -0.13
PCAT29-201ENST00000558411 GZF1Q9H116 711 aaPredicted RBP14.26□□□□□ -0.13
PCAT29-201ENST00000558411 E9PSI1 815 aa14.25□□□□□ -0.13
PCAT29-201ENST00000558411 PPP2R1AP30153 589 aa14.25□□□□□ -0.13
PCAT29-201ENST00000558411 TERF1P54274 439 aa14.25□□□□□ -0.13
PCAT29-201ENST00000558411 PMFBP1Q8TBY8 1022 aa14.25□□□□□ -0.13
PCAT29-201ENST00000558411 ARXQ96QS3 562 aa14.25□□□□□ -0.13
PCAT29-201ENST00000558411 TMF1P82094 1093 aa14.24□□□□□ -0.13
PCAT29-201ENST00000558411 KIAA0556O60303 1618 aa14.24□□□□□ -0.13
PCAT29-201ENST00000558411 PODXL2Q9NZ53 605 aa14.24□□□□□ -0.13
PCAT29-201ENST00000558411 NUP160Q12769 1436 aa14.24□□□□□ -0.13
PCAT29-201ENST00000558411 CDC42BPAQ5VT25 1732 aa14.24□□□□□ -0.13
PCAT29-201ENST00000558411 PTMSP20962 102 aa14.23□□□□□ -0.13
PCAT29-201ENST00000558411 BCAR3O75815 825 aa14.22□□□□□ -0.13
PCAT29-201ENST00000558411 MAP7D2Q96T17 732 aa14.22□□□□□ -0.13
PCAT29-201ENST00000558411 RTEL1-TNFRSF6BF6WH68 1400 aa14.22□□□□□ -0.13
PCAT29-201ENST00000558411 RNF17Q9BXT8 1623 aaKnown RBP14.21□□□□□ -0.13
PCAT29-201ENST00000558411 SYNMO15061 1565 aa14.21□□□□□ -0.13
PCAT29-201ENST00000558411 WDR7Q9Y4E6 1490 aa14.21□□□□□ -0.13
PCAT29-201ENST00000558411 C9orf84Q5VXU9 1444 aa14.21□□□□□ -0.13
PCAT29-201ENST00000558411 NCOA3Q9Y6Q9 1424 aa14.21□□□□□ -0.13
PCAT29-201ENST00000558411 CCDC141Q6ZP82 1450 aa14.21□□□□□ -0.14
PCAT29-201ENST00000558411 NPC1L1Q9UHC9 1359 aa14.2□□□□□ -0.14
PCAT29-201ENST00000558411 MYO5CQ9NQX4 1742 aa14.2□□□□□ -0.14
PCAT29-201ENST00000558411 ARID3CA6NKF2 412 aa14.2□□□□□ -0.14
PCAT29-201ENST00000558411 SKOR2Q2VWA4 1001 aaPredicted RBP14.2□□□□□ -0.14
PCAT29-201ENST00000558411 MAGI2Q86UL8 1455 aa14.2□□□□□ -0.14
PCAT29-201ENST00000558411 MAGI1Q96QZ7 1491 aaPredicted RBP14.2□□□□□ -0.14
PCAT29-201ENST00000558411 A2MP01023 1474 aa14.19□□□□□ -0.14
PCAT29-201ENST00000558411 FBLN2P98095 1184 aa14.19□□□□□ -0.14
PCAT29-201ENST00000558411 NBPF1Q3BBV0 1214 aa14.19□□□□□ -0.14
PCAT29-201ENST00000558411 ASXL1Q8IXJ9 1541 aa14.19□□□□□ -0.14
PCAT29-201ENST00000558411 FAM135AQ9P2D6 1515 aa14.19□□□□□ -0.14
PCAT29-201ENST00000558411 CCDC173Q0VFZ6 552 aa14.18□□□□□ -0.14
PCAT29-201ENST00000558411 KIAA1211Q6ZU35 1233 aa14.18□□□□□ -0.14
PCAT29-201ENST00000558411 ZNF692Q9BU19 519 aaPredicted RBP14.18□□□□□ -0.14
PCAT29-201ENST00000558411 KNSTRNQ9Y448 316 aa14.18□□□□□ -0.14
PCAT29-201ENST00000558411 PRG4Q92954 1404 aaPredicted RBP14.18□□□□□ -0.14
PCAT29-201ENST00000558411 DISP1Q96F81 1524 aa14.18□□□□□ -0.14
PCAT29-201ENST00000558411 OFD1O75665 1012 aa14.18□□□□□ -0.14
PCAT29-201ENST00000558411 PPP1R9BQ96SB3 815 aa14.18□□□□□ -0.14
PCAT29-201ENST00000558411 PRDM4Q9UKN5 801 aa14.18□□□□□ -0.14
PCAT29-201ENST00000558411 SYNJ2O15056 1496 aa14.17□□□□□ -0.14
PCAT29-201ENST00000558411 DDIT3P35638 169 aa14.17□□□□□ -0.14
PCAT29-201ENST00000558411 AMER1Q5JTC6 1135 aaPredicted RBP14.17□□□□□ -0.14
PCAT29-201ENST00000558411 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.17□□□□□ -0.14
PCAT29-201ENST00000558411 SPINK5Q9NQ38 1064 aaPredicted RBP14.17□□□□□ -0.14
PCAT29-201ENST00000558411 CIZ1Q9ULV3 898 aaPredicted RBP14.17□□□□□ -0.14
PCAT29-201ENST00000558411 C22orf23Q9BZE7 217 aa14.17□□□□□ -0.14
PCAT29-201ENST00000558411 CHD1O14646 1710 aa14.16□□□□□ -0.14
PCAT29-201ENST00000558411 ZSCAN30Q86W11 494 aa14.16□□□□□ -0.14
PCAT29-201ENST00000558411 PDZRN3Q9UPQ7 1066 aa14.16□□□□□ -0.14
PCAT29-201ENST00000558411 COG6Q9Y2V7 657 aa14.16□□□□□ -0.14
PCAT29-201ENST00000558411 HSCBQ8IWL3 235 aa14.15□□□□□ -0.14
PCAT29-201ENST00000558411 GRIN2AQ12879 1464 aa14.15□□□□□ -0.14
PCAT29-201ENST00000558411 ARHGEF5Q12774 1597 aa14.15□□□□□ -0.14
PCAT29-201ENST00000558411 CANXP27824 592 aaKnown RBP14.15□□□□□ -0.14
PCAT29-201ENST00000558411 GBP4Q96PP9 640 aa14.15□□□□□ -0.14
PCAT29-201ENST00000558411 RWDD1Q9H446 243 aaPredicted RBP14.15□□□□□ -0.14
PCAT29-201ENST00000558411 SHROOM2Q13796 1616 aa14.15□□□□□ -0.14
PCAT29-201ENST00000558411 PANK1Q8TE04 598 aa14.14□□□□□ -0.15
PCAT29-201ENST00000558411 CHMP7Q8WUX9 453 aaPredicted RBP14.14□□□□□ -0.15
PCAT29-201ENST00000558411 IBTKQ9P2D0 1353 aaPredicted RBP14.14□□□□□ -0.15
PCAT29-201ENST00000558411 APAF1O14727 1248 aa14.14□□□□□ -0.15
PCAT29-201ENST00000558411 IQGAP1P46940 1657 aa14.14□□□□□ -0.15
PCAT29-201ENST00000558411 MTERF4Q7Z6M4 381 aaKnown RBP14.13□□□□□ -0.15
PCAT29-201ENST00000558411 SPRYD3Q8NCJ5 442 aa14.13□□□□□ -0.15
PCAT29-201ENST00000558411 SNX21Q969T3 373 aa14.13□□□□□ -0.15
PCAT29-201ENST00000558411 CDCA8Q53HL2 280 aa14.12□□□□□ -0.15
PCAT29-201ENST00000558411 HS1BP3Q53T59 392 aa14.12□□□□□ -0.15
PCAT29-201ENST00000558411 GAS2L3Q86XJ1 694 aa14.12□□□□□ -0.15
PCAT29-201ENST00000558411 ZNF777Q9ULD5 760 aaPredicted RBP14.12□□□□□ -0.15
PCAT29-201ENST00000558411 UNC13BO14795 1591 aa14.12□□□□□ -0.15
PCAT29-201ENST00000558411 SMC5Q8IY18 1101 aa14.12□□□□□ -0.15
PCAT29-201ENST00000558411 PCDHB15Q9Y5E8 787 aa14.12□□□□□ -0.15
PCAT29-201ENST00000558411 MYOM1P52179 1685 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms