RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 PXYLP1Q8TE99 480 aa8.17□□□□□ -1.1
LRRC28-205ENST00000558248 TMEM134Q9H6X4 195 aa8.17□□□□□ -1.1
LRRC28-205ENST00000558248 WBP1LQ9NX94 342 aa8.17□□□□□ -1.1
LRRC28-205ENST00000558248 MINK1Q8N4C8 1332 aaPredicted RBP8.15□□□□□ -1.1
LRRC28-205ENST00000558248 RSPH4AQ5TD94 716 aa8.15□□□□□ -1.1
LRRC28-205ENST00000558248 KRI1Q8N9T8 703 aaKnown RBP8.14□□□□□ -1.11
LRRC28-205ENST00000558248 PRR14Q9BWN1 585 aa8.14□□□□□ -1.11
LRRC28-205ENST00000558248 PLA2G2EQ9NZK7 142 aa8.14□□□□□ -1.11
LRRC28-205ENST00000558248 IRF6O14896 467 aa8.12□□□□□ -1.11
LRRC28-205ENST00000558248 ZC3H15Q8WU90 426 aaKnown RBP8.12□□□□□ -1.11
LRRC28-205ENST00000558248 SULF1Q8IWU6 871 aa8.1□□□□□ -1.11
LRRC28-205ENST00000558248 CCDC102AQ96A19 550 aa8.1□□□□□ -1.11
LRRC28-205ENST00000558248 ZMYND10O75800 440 aa8.09□□□□□ -1.11
LRRC28-205ENST00000558248 KMT5BQ4FZB7 885 aa8.09□□□□□ -1.11
LRRC28-205ENST00000558248 BARGINQ6ZT62 677 aa8.09□□□□□ -1.11
LRRC28-205ENST00000558248 DAXXQ9UER7 740 aaPredicted RBP8.09□□□□□ -1.11
LRRC28-205ENST00000558248 RDH13Q8NBN7 331 aa8.07□□□□□ -1.12
LRRC28-205ENST00000558248 DDX11L8A8MPP1 907 aa8.06□□□□□ -1.12
LRRC28-205ENST00000558248 ITGBL1O95965 494 aaPredicted RBP8.06□□□□□ -1.12
LRRC28-205ENST00000558248 CFHP08603 1231 aa8.06□□□□□ -1.12
LRRC28-205ENST00000558248 APLP1P51693 650 aa8.06□□□□□ -1.12
LRRC28-205ENST00000558248 KCNC4Q03721 635 aa8.06□□□□□ -1.12
LRRC28-205ENST00000558248 CLCN1P35523 988 aa8.05□□□□□ -1.12
LRRC28-205ENST00000558248 IFFO2Q5TF58 517 aa8.05□□□□□ -1.12
LRRC28-205ENST00000558248 NLRP7Q8WX94 980 aa8.05□□□□□ -1.12
LRRC28-205ENST00000558248 PHOX2BQ99453 314 aa8.05□□□□□ -1.12
LRRC28-205ENST00000558248 MDM2Q00987 491 aaPredicted RBP8.04□□□□□ -1.12
LRRC28-205ENST00000558248 PCDHB3Q9Y5E6 796 aa8.04□□□□□ -1.12
LRRC28-205ENST00000558248 ABCC9O60706 1549 aa8.03□□□□□ -1.12
LRRC28-205ENST00000558248 MTRQ99707 1265 aa8.03□□□□□ -1.12
LRRC28-205ENST00000558248 IL21Q9HBE4 155 aa8.03□□□□□ -1.12
LRRC28-205ENST00000558248 GPCPD1Q9NPB8 672 aa8.03□□□□□ -1.12
LRRC28-205ENST00000558248 ACTN4O43707 911 aaKnown RBP8.02□□□□□ -1.13
LRRC28-205ENST00000558248 SLC10A3P09131 477 aa8.02□□□□□ -1.13
LRRC28-205ENST00000558248 TTLL12Q14166 644 aaPredicted RBP8.02□□□□□ -1.13
LRRC28-205ENST00000558248 AK7Q96M32 723 aa8.01□□□□□ -1.13
LRRC28-205ENST00000558248 COPS2P61201 443 aa8□□□□□ -1.13
LRRC28-205ENST00000558248 TJAP1Q5JTD0 557 aa8□□□□□ -1.13
LRRC28-205ENST00000558248 NR1I2O75469 434 aa7.98□□□□□ -1.13
LRRC28-205ENST00000558248 AMHR2Q16671 573 aa7.98□□□□□ -1.13
LRRC28-205ENST00000558248 GRIPAP1Q4V328 841 aa7.98□□□□□ -1.13
LRRC28-205ENST00000558248 GCGRP47871 477 aa7.97□□□□□ -1.13
LRRC28-205ENST00000558248 BLOC1S3Q6QNY0 202 aa7.97□□□□□ -1.13
LRRC28-205ENST00000558248 A0A0G2JS52 829 aa7.96□□□□□ -1.14
LRRC28-205ENST00000558248 ZPR1O75312 459 aa7.96□□□□□ -1.14
LRRC28-205ENST00000558248 CD46P15529 392 aa7.96□□□□□ -1.14
LRRC28-205ENST00000558248 GGCXP38435 758 aa7.95□□□□□ -1.14
LRRC28-205ENST00000558248 ATP6V1AP38606 617 aa7.95□□□□□ -1.14
LRRC28-205ENST00000558248 FAM217BQ9NTX9 383 aaPredicted RBP7.95□□□□□ -1.14
LRRC28-205ENST00000558248 TRIM66O15016 1216 aa7.94□□□□□ -1.14
LRRC28-205ENST00000558248 USP46P62068 366 aa7.94□□□□□ -1.14
LRRC28-205ENST00000558248 FUT2Q10981 343 aa7.94□□□□□ -1.14
LRRC28-205ENST00000558248 ZNF516Q92618 1163 aa7.94□□□□□ -1.14
LRRC28-205ENST00000558248 SLC24A3Q9HC58 644 aa7.94□□□□□ -1.14
LRRC28-205ENST00000558248 KDM4AO75164 1064 aa7.93□□□□□ -1.14
LRRC28-205ENST00000558248 GIGYF2Q6Y7W6 1299 aaKnown RBP7.93□□□□□ -1.14
LRRC28-205ENST00000558248 TMUB1Q9BVT8 246 aa7.93□□□□□ -1.14
LRRC28-205ENST00000558248 SSTR3P32745 418 aaPredicted RBP7.92□□□□□ -1.14
LRRC28-205ENST00000558248 PUS10Q3MIT2 529 aaKnown RBP7.92□□□□□ -1.14
LRRC28-205ENST00000558248 NUTM1Q86Y26 1132 aa7.92□□□□□ -1.14
LRRC28-205ENST00000558248 RGS20O76081 388 aa7.91□□□□□ -1.14
LRRC28-205ENST00000558248 PARP9Q8IXQ6 854 aa7.91□□□□□ -1.14
LRRC28-205ENST00000558248 Q3C1V9 767 aa7.9□□□□□ -1.14
LRRC28-205ENST00000558248 MORN1Q5T089 497 aa7.9□□□□□ -1.14
LRRC28-205ENST00000558248 SCUBE3Q8IX30 993 aa7.9□□□□□ -1.14
LRRC28-205ENST00000558248 TLL1O43897 1013 aa7.89□□□□□ -1.15
LRRC28-205ENST00000558248 ADH1BP00325 375 aa7.89□□□□□ -1.15
LRRC28-205ENST00000558248 PDE4DQ08499 809 aa7.89□□□□□ -1.15
LRRC28-205ENST00000558248 NKX2-3Q8TAU0 364 aa7.89□□□□□ -1.15
LRRC28-205ENST00000558248 REPIN1Q9BWE0 567 aaKnown RBP7.89□□□□□ -1.15
LRRC28-205ENST00000558248 FMNL1O95466 1100 aaPredicted RBP7.88□□□□□ -1.15
LRRC28-205ENST00000558248 DIXDC1Q155Q3 683 aa7.88□□□□□ -1.15
LRRC28-205ENST00000558248 SPSB2Q99619 263 aa7.88□□□□□ -1.15
LRRC28-205ENST00000558248 PPP1R18Q6NYC8 613 aa7.87□□□□□ -1.15
LRRC28-205ENST00000558248 BEGAINQ9BUH8 593 aa7.87□□□□□ -1.15
LRRC28-205ENST00000558248 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.87□□□□□ -1.15
LRRC28-205ENST00000558248 SLC27A5Q9Y2P5 690 aa7.87□□□□□ -1.15
LRRC28-205ENST00000558248 HOXA2O43364 376 aa7.86□□□□□ -1.15
LRRC28-205ENST00000558248 SALL2Q9Y467 1007 aaPredicted RBP7.86□□□□□ -1.15
LRRC28-205ENST00000558248 SLC6A16Q9GZN6 736 aa7.85□□□□□ -1.15
LRRC28-205ENST00000558248 S1PR4O95977 384 aa7.83□□□□□ -1.16
LRRC28-205ENST00000558248 MS4A1P11836 297 aa7.83□□□□□ -1.16
LRRC28-205ENST00000558248 FDX1P10109 184 aa7.82□□□□□ -1.16
LRRC28-205ENST00000558248 TPRNQ4KMQ1 711 aa7.82□□□□□ -1.16
LRRC28-205ENST00000558248 BRICD5Q6PL45 260 aa7.82□□□□□ -1.16
LRRC28-205ENST00000558248 SPIRE2Q8WWL2 714 aa7.82□□□□□ -1.16
LRRC28-205ENST00000558248 THAP11Q96EK4 314 aa7.82□□□□□ -1.16
LRRC28-205ENST00000558248 RNF223E7ERA6 249 aa7.81□□□□□ -1.16
LRRC28-205ENST00000558248 RNF19BQ6ZMZ0 732 aa7.81□□□□□ -1.16
LRRC28-205ENST00000558248 ANKLE1Q8NAG6 615 aa7.81□□□□□ -1.16
LRRC28-205ENST00000558248 MSS51Q4VC12 460 aa7.8□□□□□ -1.16
LRRC28-205ENST00000558248 USB1Q9BQ65 265 aaKnown RBP7.8□□□□□ -1.16
LRRC28-205ENST00000558248 TBC1D2Q9BYX2 928 aa7.8□□□□□ -1.16
LRRC28-205ENST00000558248 C6orf229H3BNL8 230 aa7.79□□□□□ -1.16
LRRC28-205ENST00000558248 HLA-CQ95604 372 aa7.79□□□□□ -1.16
LRRC28-205ENST00000558248 PRKD2Q9BZL6 878 aa7.79□□□□□ -1.16
LRRC28-205ENST00000558248 MOXD2PA6NHM9 499 aa7.78□□□□□ -1.16
LRRC28-205ENST00000558248 GJA5P36382 358 aa7.78□□□□□ -1.16
LRRC28-205ENST00000558248 GUCA2AQ02747 115 aa7.78□□□□□ -1.16
LRRC28-205ENST00000558248 RSPH6AQ9H0K4 717 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms