RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 CCDC144AA2RUR9 1427 aa16.92■□□□□ 0.3
RORA-207ENST00000558234 KNDC1Q76NI1 1749 aa16.92■□□□□ 0.3
RORA-207ENST00000558234 TRIM52Q96A61 297 aa16.92■□□□□ 0.3
RORA-207ENST00000558234 IDI1Q13907 227 aa16.91■□□□□ 0.3
RORA-207ENST00000558234 STRCP1A6NGW2 1772 aa16.91■□□□□ 0.3
RORA-207ENST00000558234 PRAG1Q86YV5 1406 aa16.91■□□□□ 0.3
RORA-207ENST00000558234 NWD1Q149M9 1564 aa16.9■□□□□ 0.3
RORA-207ENST00000558234 ASXL1Q8IXJ9 1541 aa16.9■□□□□ 0.3
RORA-207ENST00000558234 XRN1Q8IZH2 1706 aaKnown RBP16.89■□□□□ 0.29
RORA-207ENST00000558234 CHD2O14647 1828 aaKnown RBP16.88■□□□□ 0.29
RORA-207ENST00000558234 TMEM2Q9UHN6 1383 aa16.88■□□□□ 0.29
RORA-207ENST00000558234 PIK3C2GO75747 1445 aa16.88■□□□□ 0.29
RORA-207ENST00000558234 ADGRB1O14514 1584 aa16.87■□□□□ 0.29
RORA-207ENST00000558234 SCAF11Q99590 1463 aaKnown RBP16.84■□□□□ 0.29
RORA-207ENST00000558234 XIRP1Q702N8 1843 aaKnown RBP16.84■□□□□ 0.29
RORA-207ENST00000558234 ALKQ9UM73 1620 aa16.83■□□□□ 0.29
RORA-207ENST00000558234 RIMS2Q9UQ26 1411 aa16.83■□□□□ 0.28
RORA-207ENST00000558234 ADAMTS13Q76LX8 1427 aa16.83■□□□□ 0.28
RORA-207ENST00000558234 ESF1Q9H501 851 aaKnown RBP16.82■□□□□ 0.28
RORA-207ENST00000558234 PLEKHG1Q9ULL1 1385 aa16.81■□□□□ 0.28
RORA-207ENST00000558234 RPGRIP1LQ68CZ1 1315 aa16.8■□□□□ 0.28
RORA-207ENST00000558234 TIMELESSQ9UNS1 1208 aa16.8■□□□□ 0.28
RORA-207ENST00000558234 ARHGEF28Q8N1W1 1705 aaKnown RBP16.8■□□□□ 0.28
RORA-207ENST00000558234 CPS1P31327 1500 aa16.78■□□□□ 0.28
RORA-207ENST00000558234 SIN3AQ96ST3 1273 aa16.76■□□□□ 0.27
RORA-207ENST00000558234 RALGAPBQ86X10 1494 aa16.75■□□□□ 0.27
RORA-207ENST00000558234 LTKP29376 864 aa16.75■□□□□ 0.27
RORA-207ENST00000558234 LTBP4Q8N2S1 1624 aa16.74■□□□□ 0.27
RORA-207ENST00000558234 DLC1Q96QB1 1528 aa16.73■□□□□ 0.27
RORA-207ENST00000558234 NPHP4O75161 1426 aaPredicted RBP16.73■□□□□ 0.27
RORA-207ENST00000558234 GPRASP1Q5JY77 1395 aa16.73■□□□□ 0.27
RORA-207ENST00000558234 TECPR2O15040 1411 aa16.73■□□□□ 0.27
RORA-207ENST00000558234 STAC3Q96MF2 364 aa16.72■□□□□ 0.27
RORA-207ENST00000558234 THEMISQ8N1K5 641 aaPredicted RBP16.71■□□□□ 0.27
RORA-207ENST00000558234 PTPRUQ92729 1446 aa16.7■□□□□ 0.26
RORA-207ENST00000558234 ADGRB2O60241 1585 aa16.69■□□□□ 0.26
RORA-207ENST00000558234 ADGRF5Q8IZF2 1346 aa16.69■□□□□ 0.26
RORA-207ENST00000558234 NALCNQ8IZF0 1738 aa16.68■□□□□ 0.26
RORA-207ENST00000558234 L3MBTL2Q969R5 705 aa16.67■□□□□ 0.26
RORA-207ENST00000558234 PIK3R4Q99570 1358 aa16.67■□□□□ 0.26
RORA-207ENST00000558234 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.66■□□□□ 0.26
RORA-207ENST00000558234 PPP1R15AO75807 674 aaPredicted RBP16.65■□□□□ 0.26
RORA-207ENST00000558234 NKTRP30414 1462 aaKnown RBP16.65■□□□□ 0.26
RORA-207ENST00000558234 PTCH1Q13635 1447 aa16.65■□□□□ 0.26
RORA-207ENST00000558234 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.64■□□□□ 0.25
RORA-207ENST00000558234 QRICH2Q9H0J4 1663 aa16.64■□□□□ 0.25
RORA-207ENST00000558234 METP08581 1390 aa16.62■□□□□ 0.25
RORA-207ENST00000558234 NBPF8Q3BBV2 869 aa16.62■□□□□ 0.25
RORA-207ENST00000558234 C14orf93Q9H972 538 aaKnown RBP16.62■□□□□ 0.25
RORA-207ENST00000558234 NCKAP5LQ9HCH0 1330 aa16.61■□□□□ 0.25
RORA-207ENST00000558234 HSPA2P54652 639 aa16.61■□□□□ 0.25
RORA-207ENST00000558234 TOPAZ1Q8N9V7 1692 aa16.61■□□□□ 0.25
RORA-207ENST00000558234 VGFO15240 615 aaPredicted RBP16.59■□□□□ 0.25
RORA-207ENST00000558234 ANKLE2Q86XL3 938 aa16.59■□□□□ 0.25
RORA-207ENST00000558234 TBX22Q9Y458 520 aa16.59■□□□□ 0.25
RORA-207ENST00000558234 FMN2Q9NZ56 1722 aa16.58■□□□□ 0.24
RORA-207ENST00000558234 USP32Q8NFA0 1604 aa16.58■□□□□ 0.24
RORA-207ENST00000558234 TONSLQ96HA7 1378 aa16.58■□□□□ 0.24
RORA-207ENST00000558234 TXNDC2Q86VQ3 553 aa16.57■□□□□ 0.24
RORA-207ENST00000558234 FAM135BQ49AJ0 1406 aa16.57■□□□□ 0.24
RORA-207ENST00000558234 YTHDC2Q9H6S0 1430 aaKnown RBP16.57■□□□□ 0.24
RORA-207ENST00000558234 LRPPRCP42704 1394 aaKnown RBP16.57■□□□□ 0.24
RORA-207ENST00000558234 LRRC7Q96NW7 1537 aa16.56■□□□□ 0.24
RORA-207ENST00000558234 IQSEC2Q5JU85 1478 aa16.56■□□□□ 0.24
RORA-207ENST00000558234 PLPPR3Q6T4P5 718 aa16.56■□□□□ 0.24
RORA-207ENST00000558234 CDC42BPGQ6DT37 1551 aa16.56■□□□□ 0.24
RORA-207ENST00000558234 ABCC11Q96J66 1382 aa16.55■□□□□ 0.24
RORA-207ENST00000558234 DCAF11Q8TEB1 546 aa16.55■□□□□ 0.24
RORA-207ENST00000558234 NCOA3Q9Y6Q9 1424 aa16.54■□□□□ 0.24
RORA-207ENST00000558234 MYOM1P52179 1685 aa16.53■□□□□ 0.24
RORA-207ENST00000558234 RGL3Q3MIN7 710 aa16.53■□□□□ 0.24
RORA-207ENST00000558234 HDGFP51858 240 aaKnown RBP16.52■□□□□ 0.24
RORA-207ENST00000558234 NEUROD1Q13562 356 aa16.52■□□□□ 0.24
RORA-207ENST00000558234 EID1Q9Y6B2 187 aa16.52■□□□□ 0.24
RORA-207ENST00000558234 SIRT1Q96EB6 747 aa16.52■□□□□ 0.23
RORA-207ENST00000558234 ZNF316A6NFI3 1004 aaPredicted RBP16.51■□□□□ 0.23
RORA-207ENST00000558234 ZNF326Q5BKZ1 582 aaKnown RBP16.51■□□□□ 0.23
RORA-207ENST00000558234 TULP4Q9NRJ4 1543 aa16.5■□□□□ 0.23
RORA-207ENST00000558234 ROBO2Q9HCK4 1378 aa16.5■□□□□ 0.23
RORA-207ENST00000558234 NUTM2DQ5VT03 806 aaPredicted RBP16.49■□□□□ 0.23
RORA-207ENST00000558234 SBNO2Q9Y2G9 1366 aa16.49■□□□□ 0.23
RORA-207ENST00000558234 CHGAP10645 457 aaKnown RBP16.49■□□□□ 0.23
RORA-207ENST00000558234 CFAP70Q5T0N1 1121 aa16.49■□□□□ 0.23
RORA-207ENST00000558234 STAG3Q9UJ98 1225 aa16.48■□□□□ 0.23
RORA-207ENST00000558234 RGPD8O14715 1765 aaPredicted RBP16.48■□□□□ 0.23
RORA-207ENST00000558234 NBPF1Q3BBV0 1214 aa16.47■□□□□ 0.23
RORA-207ENST00000558234 ITSN1Q15811 1721 aa16.46■□□□□ 0.23
RORA-207ENST00000558234 DCCP43146 1447 aa16.45■□□□□ 0.22
RORA-207ENST00000558234 KCNA6P17658 529 aa16.45■□□□□ 0.22
RORA-207ENST00000558234 AKAP12Q02952 1782 aa16.45■□□□□ 0.22
RORA-207ENST00000558234 DMRT2Q9Y5R5 561 aa16.45■□□□□ 0.22
RORA-207ENST00000558234 NRKQ7Z2Y5 1582 aa16.44■□□□□ 0.22
RORA-207ENST00000558234 PLEKHH1Q9ULM0 1364 aa16.43■□□□□ 0.22
RORA-207ENST00000558234 ADGRL3Q9HAR2 1447 aa16.43■□□□□ 0.22
RORA-207ENST00000558234 USP54Q70EL1 1684 aa16.43■□□□□ 0.22
RORA-207ENST00000558234 NHSL1Q5SYE7 1610 aa16.42■□□□□ 0.22
RORA-207ENST00000558234 SLC26A8Q96RN1 970 aa16.42■□□□□ 0.22
RORA-207ENST00000558234 AEBP2Q6ZN18 517 aaPredicted RBP16.42■□□□□ 0.22
RORA-207ENST00000558234 ROCK2O75116 1388 aaKnown RBP16.42■□□□□ 0.22
RORA-207ENST00000558234 ZNF335Q9H4Z2 1342 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms