RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 HPS5Q9UPZ3 1129 aa8.03□□□□□ -1.12
SPG11-206ENST00000558093 IRF6O14896 467 aa8.02□□□□□ -1.13
SPG11-206ENST00000558093 SLF2Q8IX21 1173 aa8.01□□□□□ -1.13
SPG11-206ENST00000558093 TMEM134Q9H6X4 195 aa8.01□□□□□ -1.13
SPG11-206ENST00000558093 PPP4CP60510 307 aa8□□□□□ -1.13
SPG11-206ENST00000558093 NLRP7Q8WX94 980 aa8□□□□□ -1.13
SPG11-206ENST00000558093 NECTIN2Q92692 538 aa8□□□□□ -1.13
SPG11-206ENST00000558093 TSR3Q9UJK0 312 aaKnown RBP8□□□□□ -1.13
SPG11-206ENST00000558093 WBP1LQ9NX94 342 aa7.97□□□□□ -1.13
SPG11-206ENST00000558093 MDM2Q00987 491 aaPredicted RBP7.96□□□□□ -1.14
SPG11-206ENST00000558093 RSPH4AQ5TD94 716 aa7.96□□□□□ -1.14
SPG11-206ENST00000558093 NYAP1Q6ZVC0 841 aa7.96□□□□□ -1.14
SPG11-206ENST00000558093 PHOX2BQ99453 314 aa7.96□□□□□ -1.14
SPG11-206ENST00000558093 SLC24A3Q9HC58 644 aa7.96□□□□□ -1.14
SPG11-206ENST00000558093 TTLL12Q14166 644 aaPredicted RBP7.95□□□□□ -1.14
SPG11-206ENST00000558093 RDH13Q8NBN7 331 aa7.95□□□□□ -1.14
SPG11-206ENST00000558093 AK7Q96M32 723 aa7.95□□□□□ -1.14
SPG11-206ENST00000558093 DAXXQ9UER7 740 aaPredicted RBP7.95□□□□□ -1.14
SPG11-206ENST00000558093 DDX11L8A8MPP1 907 aa7.94□□□□□ -1.14
SPG11-206ENST00000558093 SULF1Q8IWU6 871 aa7.94□□□□□ -1.14
SPG11-206ENST00000558093 CLCN1P35523 988 aa7.93□□□□□ -1.14
SPG11-206ENST00000558093 TPRNQ4KMQ1 711 aa7.93□□□□□ -1.14
SPG11-206ENST00000558093 PRR14Q9BWN1 585 aa7.93□□□□□ -1.14
SPG11-206ENST00000558093 GPCPD1Q9NPB8 672 aa7.93□□□□□ -1.14
SPG11-206ENST00000558093 CFHP08603 1231 aa7.92□□□□□ -1.14
SPG11-206ENST00000558093 KMT5BQ4FZB7 885 aa7.92□□□□□ -1.14
SPG11-206ENST00000558093 TRIM66O15016 1216 aa7.9□□□□□ -1.14
SPG11-206ENST00000558093 SLC10A3P09131 477 aa7.89□□□□□ -1.15
SPG11-206ENST00000558093 APLP1P51693 650 aa7.89□□□□□ -1.15
SPG11-206ENST00000558093 AMHR2Q16671 573 aa7.89□□□□□ -1.15
SPG11-206ENST00000558093 PDE4DQ08499 809 aa7.87□□□□□ -1.15
SPG11-206ENST00000558093 GIGYF2Q6Y7W6 1299 aaKnown RBP7.87□□□□□ -1.15
SPG11-206ENST00000558093 PCDHB3Q9Y5E6 796 aa7.87□□□□□ -1.15
SPG11-206ENST00000558093 PARP9Q8IXQ6 854 aa7.86□□□□□ -1.15
SPG11-206ENST00000558093 FAM217BQ9NTX9 383 aaPredicted RBP7.86□□□□□ -1.15
SPG11-206ENST00000558093 PLA2G2EQ9NZK7 142 aa7.86□□□□□ -1.15
SPG11-206ENST00000558093 COPS2P61201 443 aa7.85□□□□□ -1.15
SPG11-206ENST00000558093 ACTN4O43707 911 aaKnown RBP7.84□□□□□ -1.15
SPG11-206ENST00000558093 CD46P15529 392 aa7.84□□□□□ -1.15
SPG11-206ENST00000558093 SSTR3P32745 418 aaPredicted RBP7.84□□□□□ -1.15
SPG11-206ENST00000558093 MTRQ99707 1265 aa7.84□□□□□ -1.15
SPG11-206ENST00000558093 REPIN1Q9BWE0 567 aaKnown RBP7.84□□□□□ -1.15
SPG11-206ENST00000558093 GCGRP47871 477 aa7.83□□□□□ -1.16
SPG11-206ENST00000558093 KCNC4Q03721 635 aa7.83□□□□□ -1.16
SPG11-206ENST00000558093 FUT2Q10981 343 aa7.82□□□□□ -1.16
SPG11-206ENST00000558093 NUTM1Q86Y26 1132 aa7.82□□□□□ -1.16
SPG11-206ENST00000558093 TMUB1Q9BVT8 246 aa7.82□□□□□ -1.16
SPG11-206ENST00000558093 IL21Q9HBE4 155 aa7.82□□□□□ -1.16
SPG11-206ENST00000558093 ITGBL1O95965 494 aaPredicted RBP7.81□□□□□ -1.16
SPG11-206ENST00000558093 GRIPAP1Q4V328 841 aa7.81□□□□□ -1.16
SPG11-206ENST00000558093 BLOC1S3Q6QNY0 202 aa7.81□□□□□ -1.16
SPG11-206ENST00000558093 KDM4AO75164 1064 aa7.8□□□□□ -1.16
SPG11-206ENST00000558093 NR1I2O75469 434 aa7.8□□□□□ -1.16
SPG11-206ENST00000558093 PUS10Q3MIT2 529 aaKnown RBP7.8□□□□□ -1.16
SPG11-206ENST00000558093 ATP6V1AP38606 617 aa7.79□□□□□ -1.16
SPG11-206ENST00000558093 TJAP1Q5JTD0 557 aa7.79□□□□□ -1.16
SPG11-206ENST00000558093 BEGAINQ9BUH8 593 aa7.79□□□□□ -1.16
SPG11-206ENST00000558093 MS4A1P11836 297 aa7.78□□□□□ -1.16
SPG11-206ENST00000558093 PRKCSHP14314 528 aaPredicted RBP7.78□□□□□ -1.16
SPG11-206ENST00000558093 USP46P62068 366 aa7.78□□□□□ -1.16
SPG11-206ENST00000558093 GPBP1L1Q9HC44 474 aaPredicted RBP7.78□□□□□ -1.16
SPG11-206ENST00000558093 ZPR1O75312 459 aa7.77□□□□□ -1.17
SPG11-206ENST00000558093 NEUROD2Q15784 382 aa7.77□□□□□ -1.17
SPG11-206ENST00000558093 ZNF516Q92618 1163 aa7.77□□□□□ -1.17
SPG11-206ENST00000558093 KDM4CQ9H3R0 1056 aa7.76□□□□□ -1.17
SPG11-206ENST00000558093 HOXA2O43364 376 aa7.75□□□□□ -1.17
SPG11-206ENST00000558093 TLL1O43897 1013 aa7.75□□□□□ -1.17
SPG11-206ENST00000558093 MORN1Q5T089 497 aa7.75□□□□□ -1.17
SPG11-206ENST00000558093 DIXDC1Q155Q3 683 aa7.74□□□□□ -1.17
SPG11-206ENST00000558093 IFFO2Q5TF58 517 aa7.74□□□□□ -1.17
SPG11-206ENST00000558093 SCUBE3Q8IX30 993 aa7.74□□□□□ -1.17
SPG11-206ENST00000558093 SPIRE2Q8WWL2 714 aa7.74□□□□□ -1.17
SPG11-206ENST00000558093 SLC27A5Q9Y2P5 690 aa7.74□□□□□ -1.17
SPG11-206ENST00000558093 Q3C1V9 767 aa7.73□□□□□ -1.17
SPG11-206ENST00000558093 ADH1BP00325 375 aa7.72□□□□□ -1.17
SPG11-206ENST00000558093 GGCXP38435 758 aa7.72□□□□□ -1.17
SPG11-206ENST00000558093 NKX2-3Q8TAU0 364 aa7.72□□□□□ -1.17
SPG11-206ENST00000558093 HLA-CQ95604 372 aa7.72□□□□□ -1.17
SPG11-206ENST00000558093 TBC1D2Q9BYX2 928 aa7.72□□□□□ -1.17
SPG11-206ENST00000558093 A0A0G2JS52 829 aa7.71□□□□□ -1.18
SPG11-206ENST00000558093 FMNL1O95466 1100 aaPredicted RBP7.71□□□□□ -1.18
SPG11-206ENST00000558093 FDX1P10109 184 aa7.71□□□□□ -1.18
SPG11-206ENST00000558093 GUCA2AQ02747 115 aa7.71□□□□□ -1.18
SPG11-206ENST00000558093 DDRGK1Q96HY6 314 aa7.71□□□□□ -1.18
SPG11-206ENST00000558093 SPSB2Q99619 263 aa7.71□□□□□ -1.18
SPG11-206ENST00000558093 MOXD2PA6NHM9 499 aa7.7□□□□□ -1.18
SPG11-206ENST00000558093 BRPF1P55201 1214 aaPredicted RBP7.7□□□□□ -1.18
SPG11-206ENST00000558093 ATP1B4Q9UN42 357 aaPredicted RBP7.7□□□□□ -1.18
SPG11-206ENST00000558093 RNF19BQ6ZMZ0 732 aa7.69□□□□□ -1.18
SPG11-206ENST00000558093 FAM117AQ9C073 453 aa7.69□□□□□ -1.18
SPG11-206ENST00000558093 C6orf229H3BNL8 230 aa7.68□□□□□ -1.18
SPG11-206ENST00000558093 NDUFV2P19404 249 aa7.68□□□□□ -1.18
SPG11-206ENST00000558093 SLC6A16Q9GZN6 736 aa7.68□□□□□ -1.18
SPG11-206ENST00000558093 RSPH6AQ9H0K4 717 aa7.68□□□□□ -1.18
SPG11-206ENST00000558093 S1PR4O95977 384 aa7.67□□□□□ -1.18
SPG11-206ENST00000558093 PPP1R18Q6NYC8 613 aa7.67□□□□□ -1.18
SPG11-206ENST00000558093 SALL2Q9Y467 1007 aaPredicted RBP7.67□□□□□ -1.18
SPG11-206ENST00000558093 CSPP1Q1MSJ5 1256 aa7.66□□□□□ -1.18
SPG11-206ENST00000558093 MYSM1Q5VVJ2 828 aa7.66□□□□□ -1.18
SPG11-206ENST00000558093 RSBN1LQ6PCB5 846 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms