RNA–Protein interactions for RNA: ENST00000557797.5

SHC4-204, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 821 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-204ENST00000557797 DDX12PQ92771 950 aa12.72□□□□□ -0.37
SHC4-204ENST00000557797 KIF21BO75037 1637 aa12.72□□□□□ -0.37
SHC4-204ENST00000557797 PTPRMP28827 1452 aa12.72□□□□□ -0.37
SHC4-204ENST00000557797 ADAMTSL3P82987 1691 aa12.71□□□□□ -0.37
SHC4-204ENST00000557797 PHF14O94880 888 aa12.71□□□□□ -0.37
SHC4-204ENST00000557797 ZDHHC16Q969W1 377 aa12.71□□□□□ -0.37
SHC4-204ENST00000557797 ADAM33Q9BZ11 813 aa12.71□□□□□ -0.37
SHC4-204ENST00000557797 BCL2L12Q9HB09 334 aa12.7□□□□□ -0.38
SHC4-204ENST00000557797 KDM5BQ9UGL1 1544 aa12.7□□□□□ -0.38
SHC4-204ENST00000557797 TNIKQ9UKE5 1360 aa12.69□□□□□ -0.38
SHC4-204ENST00000557797 PSEN2P49810 448 aa12.69□□□□□ -0.38
SHC4-204ENST00000557797 ARHGAP33O14559 1287 aa12.68□□□□□ -0.38
SHC4-204ENST00000557797 LSM11P83369 360 aaKnown RBP eCLIP12.67□□□□□ -0.38
SHC4-204ENST00000557797 TYW1BQ6NUM6 668 aa12.67□□□□□ -0.38
SHC4-204ENST00000557797 UACAQ9BZF9 1416 aa12.67□□□□□ -0.38
SHC4-204ENST00000557797 SPATA31D1Q6ZQQ2 1576 aa12.66□□□□□ -0.38
SHC4-204ENST00000557797 DMRTA1Q5VZB9 504 aa12.66□□□□□ -0.38
SHC4-204ENST00000557797 CERKQ8TCT0 537 aa12.66□□□□□ -0.38
SHC4-204ENST00000557797 MAGI3Q5TCQ9 1506 aa12.66□□□□□ -0.38
SHC4-204ENST00000557797 CARMIL2Q6F5E8 1435 aa12.65□□□□□ -0.38
SHC4-204ENST00000557797 FBXW7Q969H0 707 aa12.65□□□□□ -0.38
SHC4-204ENST00000557797 KCNK17Q96T54 332 aa12.65□□□□□ -0.38
SHC4-204ENST00000557797 EPAS1Q99814 870 aa12.65□□□□□ -0.38
SHC4-204ENST00000557797 ZCCHC11Q5TAX3 1644 aaKnown RBP12.65□□□□□ -0.38
SHC4-204ENST00000557797 PRIM1P49642 420 aaKnown RBP12.64□□□□□ -0.39
SHC4-204ENST00000557797 NBR1Q14596 966 aa12.63□□□□□ -0.39
SHC4-204ENST00000557797 SPNS2Q8IVW8 549 aa12.63□□□□□ -0.39
SHC4-204ENST00000557797 CFAP43Q8NDM7 1665 aa12.63□□□□□ -0.39
SHC4-204ENST00000557797 GRXCR2A6NFK2 248 aa12.62□□□□□ -0.39
SHC4-204ENST00000557797 MLLT3P42568 568 aaPredicted RBP12.62□□□□□ -0.39
SHC4-204ENST00000557797 WDR7Q9Y4E6 1490 aa12.61□□□□□ -0.39
SHC4-204ENST00000557797 PTPREP23469 700 aa12.61□□□□□ -0.39
SHC4-204ENST00000557797 ANKRD13DQ6ZTN6 518 aa12.61□□□□□ -0.39
SHC4-204ENST00000557797 OSBPP22059 807 aa12.6□□□□□ -0.39
SHC4-204ENST00000557797 EN1Q05925 392 aaPredicted RBP12.6□□□□□ -0.39
SHC4-204ENST00000557797 BCORL1Q5H9F3 1711 aa12.59□□□□□ -0.39
SHC4-204ENST00000557797 ARAP3Q8WWN8 1544 aa12.59□□□□□ -0.39
SHC4-204ENST00000557797 SEMA3EO15041 775 aa12.59□□□□□ -0.39
SHC4-204ENST00000557797 RBM33Q96EV2 1170 aaKnown RBP12.59□□□□□ -0.39
SHC4-204ENST00000557797 CD109Q6YHK3 1445 aa12.59□□□□□ -0.39
SHC4-204ENST00000557797 TTBK1Q5TCY1 1321 aaPredicted RBP12.58□□□□□ -0.4
SHC4-204ENST00000557797 IGF1RP08069 1367 aa12.57□□□□□ -0.4
SHC4-204ENST00000557797 COL9A1P20849 921 aa12.57□□□□□ -0.4
SHC4-204ENST00000557797 C6orf132Q5T0Z8 1188 aa12.57□□□□□ -0.4
SHC4-204ENST00000557797 MADDQ8WXG6 1647 aa12.57□□□□□ -0.4
SHC4-204ENST00000557797 IQGAP2Q13576 1575 aa12.56□□□□□ -0.4
SHC4-204ENST00000557797 TSR1Q2NL82 804 aaKnown RBP12.56□□□□□ -0.4
SHC4-204ENST00000557797 ADGRD1Q6QNK2 874 aa12.56□□□□□ -0.4
SHC4-204ENST00000557797 DISP1Q96F81 1524 aa12.56□□□□□ -0.4
SHC4-204ENST00000557797 KCNH8Q96L42 1107 aa12.55□□□□□ -0.4
SHC4-204ENST00000557797 PLSCR2Q9NRY7 297 aa12.55□□□□□ -0.4
SHC4-204ENST00000557797 PPP1R3GB7ZBB8 358 aa12.54□□□□□ -0.4
SHC4-204ENST00000557797 TK2O00142 265 aa12.54□□□□□ -0.4
SHC4-204ENST00000557797 ZBED2Q9BTP6 218 aa12.54□□□□□ -0.4
SHC4-204ENST00000557797 MAP3K7O43318 606 aa12.53□□□□□ -0.4
SHC4-204ENST00000557797 TESPA1A2RU30 521 aaPredicted RBP12.52□□□□□ -0.41
SHC4-204ENST00000557797 SLC4A5Q9BY07 1137 aa12.52□□□□□ -0.41
SHC4-204ENST00000557797 VPS9D1Q9Y2B5 631 aa12.52□□□□□ -0.41
SHC4-204ENST00000557797 HRO43593 1189 aa12.51□□□□□ -0.41
SHC4-204ENST00000557797 HSPA2P54652 639 aa12.51□□□□□ -0.41
SHC4-204ENST00000557797 MMRN1Q13201 1228 aa12.51□□□□□ -0.41
SHC4-204ENST00000557797 CDHR5Q9HBB8 845 aa12.5□□□□□ -0.41
SHC4-204ENST00000557797 RIMS1Q86UR5 1692 aaKnown RBP12.5□□□□□ -0.41
SHC4-204ENST00000557797 PHLDB1Q86UU1 1377 aa12.49□□□□□ -0.41
SHC4-204ENST00000557797 UGGT2Q9NYU1 1516 aa12.48□□□□□ -0.41
SHC4-204ENST00000557797 PROX2Q3B8N5 592 aa12.48□□□□□ -0.41
SHC4-204ENST00000557797 KIF27Q86VH2 1401 aa12.47□□□□□ -0.41
SHC4-204ENST00000557797 KIAA0556O60303 1618 aa12.46□□□□□ -0.41
SHC4-204ENST00000557797 CARMIL1Q5VZK9 1371 aa12.44□□□□□ -0.42
SHC4-204ENST00000557797 BHMG1C9JSJ3 638 aaPredicted RBP12.44□□□□□ -0.42
SHC4-204ENST00000557797 NPDC1Q9NQX5 325 aaPredicted RBP12.44□□□□□ -0.42
SHC4-204ENST00000557797 FRMPD1Q5SYB0 1578 aa12.43□□□□□ -0.42
SHC4-204ENST00000557797 MYT1LQ9UL68 1186 aa12.43□□□□□ -0.42
SHC4-204ENST00000557797 ARHGEF40Q8TER5 1519 aa12.42□□□□□ -0.42
SHC4-204ENST00000557797 ABCA8O94911 1581 aa12.41□□□□□ -0.42
SHC4-204ENST00000557797 STRCQ7RTU9 1775 aa12.41□□□□□ -0.42
SHC4-204ENST00000557797 ABCA9Q8IUA7 1624 aa12.4□□□□□ -0.42
SHC4-204ENST00000557797 ARID4BQ4LE39 1312 aaPredicted RBP12.4□□□□□ -0.42
SHC4-204ENST00000557797 RAPGEF3O95398 923 aa12.4□□□□□ -0.42
SHC4-204ENST00000557797 TSKSQ9UJT2 592 aa12.4□□□□□ -0.42
SHC4-204ENST00000557797 IQSEC2Q5JU85 1478 aa12.4□□□□□ -0.43
SHC4-204ENST00000557797 NEO1Q92859 1461 aa12.4□□□□□ -0.43
SHC4-204ENST00000557797 YEATS2Q9ULM3 1422 aa12.39□□□□□ -0.43
SHC4-204ENST00000557797 TRIM6-TRIM34B2RNG4 842 aa12.39□□□□□ -0.43
SHC4-204ENST00000557797 RBM26Q5T8P6 1007 aaKnown RBP12.39□□□□□ -0.43
SHC4-204ENST00000557797 RABGEF1Q9UJ41 708 aa12.39□□□□□ -0.43
SHC4-204ENST00000557797 PREX1Q8TCU6 1659 aa12.38□□□□□ -0.43
SHC4-204ENST00000557797 RNF166Q96A37 237 aaPredicted RBP12.38□□□□□ -0.43
SHC4-204ENST00000557797 FAM198AQ9UFP1 575 aa12.38□□□□□ -0.43
SHC4-204ENST00000557797 TTC37Q6PGP7 1564 aa12.38□□□□□ -0.43
SHC4-204ENST00000557797 ONECUT3O60422 494 aaPredicted RBP12.37□□□□□ -0.43
SHC4-204ENST00000557797 PRSS12P56730 875 aa12.37□□□□□ -0.43
SHC4-204ENST00000557797 CDCA7LQ96GN5 454 aa12.37□□□□□ -0.43
SHC4-204ENST00000557797 KIAA1468Q9P260 1216 aa12.37□□□□□ -0.43
SHC4-204ENST00000557797 PTGDRQ13258 359 aa12.36□□□□□ -0.43
SHC4-204ENST00000557797 SMYD5Q6GMV2 418 aa12.36□□□□□ -0.43
SHC4-204ENST00000557797 POGZQ7Z3K3 1410 aa12.36□□□□□ -0.43
SHC4-204ENST00000557797 FER1L4A9Z1Z3 1794 aa12.34□□□□□ -0.43
SHC4-204ENST00000557797 NUTM2FA1L443 756 aa12.34□□□□□ -0.43
SHC4-204ENST00000557797 FANCAO15360 1455 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms