RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 USP17L8P0C7I0 530 aa6.06□□□□□ -1.44
TDP1-217ENST00000557782 PLCG2P16885 1265 aa6.06□□□□□ -1.44
TDP1-217ENST00000557782 CSPP1Q1MSJ5 1256 aa6.06□□□□□ -1.44
TDP1-217ENST00000557782 RSBN1LQ6PCB5 846 aaPredicted RBP6.06□□□□□ -1.44
TDP1-217ENST00000557782 TMEM92Q6UXU6 159 aa6.06□□□□□ -1.44
TDP1-217ENST00000557782 CHRDL2Q6WN34 429 aa6.06□□□□□ -1.44
TDP1-217ENST00000557782 NUTM1Q86Y26 1132 aa6.06□□□□□ -1.44
TDP1-217ENST00000557782 ZNF710Q8N1W2 664 aa6.06□□□□□ -1.44
TDP1-217ENST00000557782 RBM46Q8TBY0 533 aaKnown RBP6.06□□□□□ -1.44
TDP1-217ENST00000557782 RBM27Q9P2N5 1060 aaKnown RBP6.06□□□□□ -1.44
TDP1-217ENST00000557782 PCDHGA10Q9Y5H3 936 aa6.06□□□□□ -1.44
TDP1-217ENST00000557782 CFAP70Q5T0N1 1121 aa6.05□□□□□ -1.44
TDP1-217ENST00000557782 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.04□□□□□ -1.44
TDP1-217ENST00000557782 SLC34A2O95436 690 aa6.04□□□□□ -1.44
TDP1-217ENST00000557782 GJA5P36382 358 aa6.04□□□□□ -1.44
TDP1-217ENST00000557782 SULF1Q8IWU6 871 aa6.04□□□□□ -1.44
TDP1-217ENST00000557782 PPP1R12CQ9BZL4 782 aa6.04□□□□□ -1.44
TDP1-217ENST00000557782 VRTNQ9H8Y1 702 aa6.04□□□□□ -1.44
TDP1-217ENST00000557782 NUTM2BA6NNL0 878 aaPredicted RBP6.03□□□□□ -1.44
TDP1-217ENST00000557782 NUTM2EB1AL46 878 aaPredicted RBP6.03□□□□□ -1.44
TDP1-217ENST00000557782 LILRB3O75022 631 aa6.03□□□□□ -1.44
TDP1-217ENST00000557782 CD46P15529 392 aa6.03□□□□□ -1.44
TDP1-217ENST00000557782 NUTM2DQ5VT03 806 aaPredicted RBP6.03□□□□□ -1.44
TDP1-217ENST00000557782 B4GALNT3Q6L9W6 998 aa6.03□□□□□ -1.44
TDP1-217ENST00000557782 NUTM2AQ8IVF1 878 aaPredicted RBP6.03□□□□□ -1.44
TDP1-217ENST00000557782 JPH4Q96JJ6 628 aa6.03□□□□□ -1.44
TDP1-217ENST00000557782 SRPK2P78362 688 aaKnown RBP6.02□□□□□ -1.45
TDP1-217ENST00000557782 QPCTQ16769 361 aa6.02□□□□□ -1.45
TDP1-217ENST00000557782 ADAMTS19Q8TE59 1207 aa6.02□□□□□ -1.45
TDP1-217ENST00000557782 MOXD2PA6NHM9 499 aa6.01□□□□□ -1.45
TDP1-217ENST00000557782 C19orf67A6NJJ6 358 aa6.01□□□□□ -1.45
TDP1-217ENST00000557782 LMOD1P29536 600 aaPredicted RBP6.01□□□□□ -1.45
TDP1-217ENST00000557782 ATN1P54259 1190 aaPredicted RBP6.01□□□□□ -1.45
TDP1-217ENST00000557782 PRPF38BQ5VTL8 546 aaKnown RBP6.01□□□□□ -1.45
TDP1-217ENST00000557782 TTC13Q8NBP0 860 aa6.01□□□□□ -1.45
TDP1-217ENST00000557782 USP35Q9P2H5 1018 aa6.01□□□□□ -1.45
TDP1-217ENST00000557782 PALM3A6NDB9 673 aaPredicted RBP6□□□□□ -1.45
TDP1-217ENST00000557782 GALR2O43603 387 aaPredicted RBP6□□□□□ -1.45
TDP1-217ENST00000557782 ATG7O95352 703 aa6□□□□□ -1.45
TDP1-217ENST00000557782 RTL5Q5HYW3 569 aaPredicted RBP6□□□□□ -1.45
TDP1-217ENST00000557782 C6orf132Q5T0Z8 1188 aa6□□□□□ -1.45
TDP1-217ENST00000557782 GJD4Q96KN9 370 aaPredicted RBP6□□□□□ -1.45
TDP1-217ENST00000557782 CARNS1A5YM72 827 aa5.99□□□□□ -1.45
TDP1-217ENST00000557782 SOX11P35716 441 aa5.99□□□□□ -1.45
TDP1-217ENST00000557782 CLCN6P51797 869 aa5.99□□□□□ -1.45
TDP1-217ENST00000557782 ZBTB3Q9H5J0 574 aa5.99□□□□□ -1.45
TDP1-217ENST00000557782 GNEQ9Y223 722 aaKnown RBP5.99□□□□□ -1.45
TDP1-217ENST00000557782 RCCD1A6NED2 376 aa5.98□□□□□ -1.45
TDP1-217ENST00000557782 TMEM88BA6NKF7 163 aa5.98□□□□□ -1.45
TDP1-217ENST00000557782 DDX11L8A8MPP1 907 aa5.98□□□□□ -1.45
TDP1-217ENST00000557782 HSP90B1P14625 803 aaKnown RBP5.98□□□□□ -1.45
TDP1-217ENST00000557782 NDUFV2P19404 249 aa5.98□□□□□ -1.45
TDP1-217ENST00000557782 PRSS12P56730 875 aa5.98□□□□□ -1.45
TDP1-217ENST00000557782 VAC14Q08AM6 782 aa5.98□□□□□ -1.45
TDP1-217ENST00000557782 ALG2Q9H553 416 aa5.98□□□□□ -1.45
TDP1-217ENST00000557782 ATMINO43313 823 aaPredicted RBP5.97□□□□□ -1.45
TDP1-217ENST00000557782 RSPH4AQ5TD94 716 aa5.97□□□□□ -1.45
TDP1-217ENST00000557782 CABLES1Q8TDN4 633 aa5.97□□□□□ -1.45
TDP1-217ENST00000557782 ZDHHC16Q969W1 377 aa5.97□□□□□ -1.45
TDP1-217ENST00000557782 CDCA7LQ96GN5 454 aa5.97□□□□□ -1.45
TDP1-217ENST00000557782 PCDHB15Q9Y5E8 787 aa5.97□□□□□ -1.45
TDP1-217ENST00000557782 ERCC3P19447 782 aa5.96□□□□□ -1.46
TDP1-217ENST00000557782 FOSBP53539 338 aa5.96□□□□□ -1.46
TDP1-217ENST00000557782 ASTLQ6HA08 431 aaPredicted RBP5.96□□□□□ -1.46
TDP1-217ENST00000557782 C3orf67Q6ZVT6 689 aa5.96□□□□□ -1.46
TDP1-217ENST00000557782 HELBQ8NG08 1087 aaPredicted RBP5.96□□□□□ -1.46
TDP1-217ENST00000557782 CCER1Q8TC90 406 aaPredicted RBP5.96□□□□□ -1.46
TDP1-217ENST00000557782 TFIP11Q9UBB9 837 aaKnown RBP5.96□□□□□ -1.46
TDP1-217ENST00000557782 PCDHGA4Q9Y5G9 962 aa5.96□□□□□ -1.46
TDP1-217ENST00000557782 RBM47A0AV96 593 aaKnown RBP5.95□□□□□ -1.46
TDP1-217ENST00000557782 SEC24BO95487 1268 aa5.95□□□□□ -1.46
TDP1-217ENST00000557782 DNAJB2P25686 324 aa5.95□□□□□ -1.46
TDP1-217ENST00000557782 USP46P62068 366 aa5.95□□□□□ -1.46
TDP1-217ENST00000557782 SEMA3FQ13275 785 aa5.95□□□□□ -1.46
TDP1-217ENST00000557782 KDM4AO75164 1064 aa5.94□□□□□ -1.46
TDP1-217ENST00000557782 CDCA8Q53HL2 280 aa5.94□□□□□ -1.46
TDP1-217ENST00000557782 ZNF454Q8N9F8 522 aa5.94□□□□□ -1.46
TDP1-217ENST00000557782 RDH13Q8NBN7 331 aa5.94□□□□□ -1.46
TDP1-217ENST00000557782 PNMA1Q8ND90 353 aa5.94□□□□□ -1.46
TDP1-217ENST00000557782 UCN2Q96RP3 112 aa5.94□□□□□ -1.46
TDP1-217ENST00000557782 TRIM34Q9BYJ4 488 aa5.94□□□□□ -1.46
TDP1-217ENST00000557782 HMX1Q9NP08 348 aaPredicted RBP5.94□□□□□ -1.46
TDP1-217ENST00000557782 MAFBQ9Y5Q3 323 aaPredicted RBP5.94□□□□□ -1.46
TDP1-217ENST00000557782 FDX1P10109 184 aa5.93□□□□□ -1.46
TDP1-217ENST00000557782 CDK11BP21127 795 aaKnown RBP5.93□□□□□ -1.46
TDP1-217ENST00000557782 EYA1Q99502 592 aa5.93□□□□□ -1.46
TDP1-217ENST00000557782 CDK11AQ9UQ88 783 aaPredicted RBP5.93□□□□□ -1.46
TDP1-217ENST00000557782 UNCXA6NJT0 531 aa5.92□□□□□ -1.46
TDP1-217ENST00000557782 NBPF26B4DH59 902 aa5.92□□□□□ -1.46
TDP1-217ENST00000557782 GPR37L1O60883 481 aa5.92□□□□□ -1.46
TDP1-217ENST00000557782 CTDSPL2Q05D32 466 aa5.92□□□□□ -1.46
TDP1-217ENST00000557782 PRR7Q8TB68 274 aa5.92□□□□□ -1.46
TDP1-217ENST00000557782 TSC1Q92574 1164 aa5.92□□□□□ -1.46
TDP1-217ENST00000557782 PUS7Q96PZ0 661 aaKnown RBP5.92□□□□□ -1.46
TDP1-217ENST00000557782 HOXA2O43364 376 aa5.91□□□□□ -1.46
TDP1-217ENST00000557782 ATP9BO43861 1147 aa5.91□□□□□ -1.46
TDP1-217ENST00000557782 EIF4G2P78344 907 aaKnown RBP eCLIP5.91□□□□□ -1.46
TDP1-217ENST00000557782 MTMR2Q13614 643 aa5.91□□□□□ -1.46
TDP1-217ENST00000557782 ELOAQ14241 798 aaKnown RBP5.91□□□□□ -1.46
TDP1-217ENST00000557782 TMEM134Q9H6X4 195 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms