RNA–Protein interactions for RNA: ENST00000557640.1

RD3L-201, Transcript of retinal degeneration 3 like, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RD3L, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3L-201ENST00000557640 AGLP35573 1532 aa13.36□□□□□ -0.27
RD3L-201ENST00000557640 FMN1Q68DA7 1419 aa13.36□□□□□ -0.27
RD3L-201ENST00000557640 MROH2AA6NES4 1674 aa13.35□□□□□ -0.27
RD3L-201ENST00000557640 HOXB3P14651 431 aaPredicted RBP13.35□□□□□ -0.27
RD3L-201ENST00000557640 MLH3Q9UHC1 1453 aa13.35□□□□□ -0.27
RD3L-201ENST00000557640 ZNF142P52746 1687 aaPredicted RBP13.34□□□□□ -0.27
RD3L-201ENST00000557640 SAMD9LQ8IVG5 1584 aa13.34□□□□□ -0.27
RD3L-201ENST00000557640 AFAP1Q8N556 730 aa13.34□□□□□ -0.27
RD3L-201ENST00000557640 MYO3AQ8NEV4 1616 aa13.33□□□□□ -0.28
RD3L-201ENST00000557640 ERBB3P21860 1342 aa13.33□□□□□ -0.28
RD3L-201ENST00000557640 NCOA1Q15788 1441 aa13.32□□□□□ -0.28
RD3L-201ENST00000557640 CIZ1Q9ULV3 898 aaPredicted RBP13.32□□□□□ -0.28
RD3L-201ENST00000557640 SUPT6HQ7KZ85 1726 aaKnown RBP13.32□□□□□ -0.28
RD3L-201ENST00000557640 DISP3Q9P2K9 1392 aa13.32□□□□□ -0.28
RD3L-201ENST00000557640 PTPRTO14522 1441 aa13.31□□□□□ -0.28
RD3L-201ENST00000557640 CLTCQ00610 1675 aaKnown RBP13.31□□□□□ -0.28
RD3L-201ENST00000557640 SYCP2Q9BX26 1530 aa13.31□□□□□ -0.28
RD3L-201ENST00000557640 HOXB1P14653 301 aaPredicted RBP13.31□□□□□ -0.28
RD3L-201ENST00000557640 EFCAB2Q5VUJ9 269 aa13.31□□□□□ -0.28
RD3L-201ENST00000557640 PLXNC1O60486 1568 aa13.31□□□□□ -0.28
RD3L-201ENST00000557640 INO80Q9ULG1 1556 aaPredicted RBP13.31□□□□□ -0.28
RD3L-201ENST00000557640 DOK7Q18PE1 504 aa13.3□□□□□ -0.28
RD3L-201ENST00000557640 CAMSAP1Q5T5Y3 1602 aa13.3□□□□□ -0.28
RD3L-201ENST00000557640 CLIP1P30622 1438 aa13.29□□□□□ -0.28
RD3L-201ENST00000557640 ATP1B4Q9UN42 357 aaPredicted RBP13.27□□□□□ -0.29
RD3L-201ENST00000557640 ATP7AQ04656 1500 aa13.25□□□□□ -0.29
RD3L-201ENST00000557640 IQSEC2Q5JU85 1478 aa13.25□□□□□ -0.29
RD3L-201ENST00000557640 CCDC18Q5T9S5 1454 aa13.25□□□□□ -0.29
RD3L-201ENST00000557640 CASKIN1Q8WXD9 1431 aa13.25□□□□□ -0.29
RD3L-201ENST00000557640 CEP170BQ9Y4F5 1589 aaPredicted RBP13.24□□□□□ -0.29
RD3L-201ENST00000557640 SPOCK2Q92563 424 aa13.24□□□□□ -0.29
RD3L-201ENST00000557640 SOCS7O14512 581 aa13.23□□□□□ -0.29
RD3L-201ENST00000557640 RIMBP2O15034 1052 aa13.23□□□□□ -0.29
RD3L-201ENST00000557640 RNF166Q96A37 237 aaPredicted RBP13.23□□□□□ -0.29
RD3L-201ENST00000557640 ADGBQ8N7X0 1667 aa13.23□□□□□ -0.29
RD3L-201ENST00000557640 FYCO1Q9BQS8 1478 aa13.22□□□□□ -0.29
RD3L-201ENST00000557640 POLR1AO95602 1720 aaPredicted RBP13.22□□□□□ -0.29
RD3L-201ENST00000557640 NPATQ14207 1427 aa13.22□□□□□ -0.29
RD3L-201ENST00000557640 CNTLNQ9NXG0 1405 aa13.22□□□□□ -0.29
RD3L-201ENST00000557640 UBTFP17480 764 aaKnown RBP13.21□□□□□ -0.29
RD3L-201ENST00000557640 VARS2Q5ST30 1063 aaKnown RBP13.21□□□□□ -0.29
RD3L-201ENST00000557640 GPATCH8Q9UKJ3 1502 aaKnown RBP13.2□□□□□ -0.3
RD3L-201ENST00000557640 TCOF1Q13428 1488 aaKnown RBP13.2□□□□□ -0.3
RD3L-201ENST00000557640 NEURL4Q96JN8 1562 aa13.2□□□□□ -0.3
RD3L-201ENST00000557640 CDK11AQ9UQ88 783 aaPredicted RBP13.19□□□□□ -0.3
RD3L-201ENST00000557640 TIAM1Q13009 1591 aa13.19□□□□□ -0.3
RD3L-201ENST00000557640 ZNF335Q9H4Z2 1342 aaPredicted RBP13.18□□□□□ -0.3
RD3L-201ENST00000557640 PTPRKQ15262 1439 aa13.18□□□□□ -0.3
RD3L-201ENST00000557640 DNMT1P26358 1616 aaKnown RBP13.17□□□□□ -0.3
RD3L-201ENST00000557640 PLA2R1Q13018 1463 aa13.17□□□□□ -0.3
RD3L-201ENST00000557640 MYT1LQ9UL68 1186 aa13.17□□□□□ -0.3
RD3L-201ENST00000557640 EFCAB3Q8N7B9 438 aa13.16□□□□□ -0.3
RD3L-201ENST00000557640 ALKQ9UM73 1620 aa13.16□□□□□ -0.3
RD3L-201ENST00000557640 A2MP01023 1474 aa13.16□□□□□ -0.3
RD3L-201ENST00000557640 NCKAP5LQ9HCH0 1330 aa13.15□□□□□ -0.3
RD3L-201ENST00000557640 IFNLR1Q8IU57 520 aaPredicted RBP13.15□□□□□ -0.3
RD3L-201ENST00000557640 ZMYM3Q14202 1370 aa13.15□□□□□ -0.3
RD3L-201ENST00000557640 MED1Q15648 1581 aaPredicted RBP13.15□□□□□ -0.3
RD3L-201ENST00000557640 STRCP1A6NGW2 1772 aa13.12□□□□□ -0.31
RD3L-201ENST00000557640 HNRNPMP52272 730 aaKnown RBP eCLIP13.11□□□□□ -0.31
RD3L-201ENST00000557640 KIAA1107Q9UPP5 1409 aa13.11□□□□□ -0.31
RD3L-201ENST00000557640 SPAG9O60271 1321 aaKnown RBP13.11□□□□□ -0.31
RD3L-201ENST00000557640 A2ML1A8K2U0 1454 aa13.1□□□□□ -0.31
RD3L-201ENST00000557640 ZNF687Q8N1G0 1237 aa13.1□□□□□ -0.31
RD3L-201ENST00000557640 ZNF777Q9ULD5 760 aaPredicted RBP13.1□□□□□ -0.31
RD3L-201ENST00000557640 VWDEQ8N2E2 1590 aa13.1□□□□□ -0.31
RD3L-201ENST00000557640 MBD5Q9P267 1494 aa13.1□□□□□ -0.31
RD3L-201ENST00000557640 ESF1Q9H501 851 aaKnown RBP13.09□□□□□ -0.31
RD3L-201ENST00000557640 ZSWIM6Q9HCJ5 1215 aa13.09□□□□□ -0.31
RD3L-201ENST00000557640 MICALL2Q8IY33 904 aa13.08□□□□□ -0.32
RD3L-201ENST00000557640 PLEKHH2Q8IVE3 1493 aa13.08□□□□□ -0.32
RD3L-201ENST00000557640 EHBP1L1Q8N3D4 1523 aa13.08□□□□□ -0.32
RD3L-201ENST00000557640 UBAP1LF5GYI3 381 aa13.06□□□□□ -0.32
RD3L-201ENST00000557640 TMEM92Q6UXU6 159 aa13.06□□□□□ -0.32
RD3L-201ENST00000557640 KDM5DQ9BY66 1539 aa13.06□□□□□ -0.32
RD3L-201ENST00000557640 ZNF644Q9H582 1327 aaPredicted RBP13.06□□□□□ -0.32
RD3L-201ENST00000557640 GPR153Q6NV75 609 aa13.04□□□□□ -0.32
RD3L-201ENST00000557640 IQGAP1P46940 1657 aa13.04□□□□□ -0.32
RD3L-201ENST00000557640 CCNB3Q8WWL7 1395 aa13.04□□□□□ -0.32
RD3L-201ENST00000557640 PZPP20742 1482 aa13.04□□□□□ -0.32
RD3L-201ENST00000557640 DEPDC5O75140 1603 aa13.03□□□□□ -0.32
RD3L-201ENST00000557640 ZC3H13Q5T200 1668 aaKnown RBP13.03□□□□□ -0.32
RD3L-201ENST00000557640 CAMSAP2Q08AD1 1489 aa13.03□□□□□ -0.32
RD3L-201ENST00000557640 CPS1P31327 1500 aa13.03□□□□□ -0.32
RD3L-201ENST00000557640 MROH1Q8NDA8 1641 aa13.02□□□□□ -0.32
RD3L-201ENST00000557640 RNF17Q9BXT8 1623 aaKnown RBP13.02□□□□□ -0.32
RD3L-201ENST00000557640 XIRP1Q702N8 1843 aaKnown RBP13.02□□□□□ -0.32
RD3L-201ENST00000557640 GGT6Q6P531 493 aa13.02□□□□□ -0.33
RD3L-201ENST00000557640 ANKRD13DQ6ZTN6 518 aa13.02□□□□□ -0.33
RD3L-201ENST00000557640 SHANK2Q9UPX8 1470 aa13.02□□□□□ -0.33
RD3L-201ENST00000557640 FAM135AQ9P2D6 1515 aa13.02□□□□□ -0.33
RD3L-201ENST00000557640 CEP152O94986 1710 aa13.02□□□□□ -0.33
RD3L-201ENST00000557640 PKD2Q13563 968 aa13.01□□□□□ -0.33
RD3L-201ENST00000557640 CFDP1Q9UEE9 299 aaPredicted RBP13.01□□□□□ -0.33
RD3L-201ENST00000557640 CCDC141Q6ZP82 1450 aa13□□□□□ -0.33
RD3L-201ENST00000557640 MTUS2Q5JR59 1369 aa13□□□□□ -0.33
RD3L-201ENST00000557640 TNRQ92752 1358 aa13□□□□□ -0.33
RD3L-201ENST00000557640 HSPA1LP34931 641 aa13□□□□□ -0.33
RD3L-201ENST00000557640 PTGER2P43116 358 aa13□□□□□ -0.33
RD3L-201ENST00000557640 SYNMO15061 1565 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms