RNA–Protein interactions for RNA: ENST00000557517.1

PSMC6-215, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-215ENST00000557517 SYNMO15061 1565 aa16.24■□□□□ 0.19
PSMC6-215ENST00000557517 PPARGC1BQ86YN6 1023 aaKnown RBP16.23■□□□□ 0.19
PSMC6-215ENST00000557517 LRRC7Q96NW7 1537 aa16.23■□□□□ 0.19
PSMC6-215ENST00000557517 NOS1P29475 1434 aa16.22■□□□□ 0.19
PSMC6-215ENST00000557517 EID1Q9Y6B2 187 aa16.21■□□□□ 0.19
PSMC6-215ENST00000557517 ARHGAP23Q9P227 1491 aa16.21■□□□□ 0.19
PSMC6-215ENST00000557517 TMEM2Q9UHN6 1383 aa16.2■□□□□ 0.18
PSMC6-215ENST00000557517 STAG3Q9UJ98 1225 aa16.19■□□□□ 0.18
PSMC6-215ENST00000557517 SLIT1O75093 1534 aa16.18■□□□□ 0.18
PSMC6-215ENST00000557517 POTEHQ6S545 545 aa16.17■□□□□ 0.18
PSMC6-215ENST00000557517 RPRD2Q5VT52 1461 aaKnown RBP16.16■□□□□ 0.18
PSMC6-215ENST00000557517 SCAF11Q99590 1463 aaKnown RBP16.16■□□□□ 0.18
PSMC6-215ENST00000557517 ITGAEP38570 1179 aa16.16■□□□□ 0.18
PSMC6-215ENST00000557517 RGS17Q9UGC6 210 aaPredicted RBP16.16■□□□□ 0.18
PSMC6-215ENST00000557517 CEP152O94986 1710 aa16.16■□□□□ 0.18
PSMC6-215ENST00000557517 EFCAB6Q5THR3 1501 aa16.14■□□□□ 0.17
PSMC6-215ENST00000557517 XIRP1Q702N8 1843 aaKnown RBP16.13■□□□□ 0.17
PSMC6-215ENST00000557517 UBR1Q8IWV7 1749 aa16.12■□□□□ 0.17
PSMC6-215ENST00000557517 NUP155O75694 1391 aa16.12■□□□□ 0.17
PSMC6-215ENST00000557517 RRBP1Q9P2E9 1410 aaKnown RBP16.11■□□□□ 0.17
PSMC6-215ENST00000557517 MYCNP04198 464 aaPredicted RBP16.11■□□□□ 0.17
PSMC6-215ENST00000557517 HDGFP51858 240 aaKnown RBP16.11■□□□□ 0.17
PSMC6-215ENST00000557517 KCNA6P17658 529 aa16.09■□□□□ 0.17
PSMC6-215ENST00000557517 PIK3C2BO00750 1634 aa16.08■□□□□ 0.17
PSMC6-215ENST00000557517 SLC26A8Q96RN1 970 aa16.08■□□□□ 0.16
PSMC6-215ENST00000557517 KDM5AP29375 1690 aaKnown RBP16.06■□□□□ 0.16
PSMC6-215ENST00000557517 FAM135BQ49AJ0 1406 aa16.06■□□□□ 0.16
PSMC6-215ENST00000557517 TET3O43151 1660 aa16.05■□□□□ 0.16
PSMC6-215ENST00000557517 UNC13BO14795 1591 aa16.05■□□□□ 0.16
PSMC6-215ENST00000557517 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.05■□□□□ 0.16
PSMC6-215ENST00000557517 CFAP65Q6ZU64 1925 aaKnown RBP16.05■□□□□ 0.16
PSMC6-215ENST00000557517 ZFYVE9O95405 1425 aa16.04■□□□□ 0.16
PSMC6-215ENST00000557517 TBX22Q9Y458 520 aa16.04■□□□□ 0.16
PSMC6-215ENST00000557517 PLEKHG1Q9ULL1 1385 aa16.02■□□□□ 0.16
PSMC6-215ENST00000557517 POTEAQ6S8J7 498 aa16.02■□□□□ 0.16
PSMC6-215ENST00000557517 ADGRB3O60242 1522 aa16.02■□□□□ 0.15
PSMC6-215ENST00000557517 NAIPQ13075 1403 aa16.02■□□□□ 0.15
PSMC6-215ENST00000557517 CHGAP10645 457 aaKnown RBP16.01■□□□□ 0.15
PSMC6-215ENST00000557517 BCANQ96GW7 911 aa16.01■□□□□ 0.15
PSMC6-215ENST00000557517 RIMS2Q9UQ26 1411 aa16.01■□□□□ 0.15
PSMC6-215ENST00000557517 PROSER2Q86WR7 435 aaPredicted RBP16■□□□□ 0.15
PSMC6-215ENST00000557517 IQGAP3Q86VI3 1631 aa15.99■□□□□ 0.15
PSMC6-215ENST00000557517 PPP1R15AO75807 674 aaPredicted RBP15.99■□□□□ 0.15
PSMC6-215ENST00000557517 TMEM94Q12767 1356 aa15.99■□□□□ 0.15
PSMC6-215ENST00000557517 ROBO1Q9Y6N7 1651 aa15.99■□□□□ 0.15
PSMC6-215ENST00000557517 TMEM131LA2VDJ0 1609 aa15.97■□□□□ 0.15
PSMC6-215ENST00000557517 HFM1A2PYH4 1435 aa15.96■□□□□ 0.15
PSMC6-215ENST00000557517 NUTM2DQ5VT03 806 aaPredicted RBP15.96■□□□□ 0.15
PSMC6-215ENST00000557517 RBM33Q96EV2 1170 aaKnown RBP15.96■□□□□ 0.15
PSMC6-215ENST00000557517 SLC4A1APQ9BWU0 796 aaKnown RBP15.96■□□□□ 0.15
PSMC6-215ENST00000557517 SETD1AO15047 1707 aaKnown RBP15.96■□□□□ 0.15
PSMC6-215ENST00000557517 E9PCH4 1651 aa15.95■□□□□ 0.14
PSMC6-215ENST00000557517 GCC2Q8IWJ2 1684 aa15.95■□□□□ 0.14
PSMC6-215ENST00000557517 ADAMTS13Q76LX8 1427 aa15.94■□□□□ 0.14
PSMC6-215ENST00000557517 NWD1Q149M9 1564 aa15.93■□□□□ 0.14
PSMC6-215ENST00000557517 PIK3R4Q99570 1358 aa15.93■□□□□ 0.14
PSMC6-215ENST00000557517 TRIM52Q96A61 297 aa15.93■□□□□ 0.14
PSMC6-215ENST00000557517 RBM42Q9BTD8 480 aaKnown RBP15.93■□□□□ 0.14
PSMC6-215ENST00000557517 NKTRP30414 1462 aaKnown RBP15.92■□□□□ 0.14
PSMC6-215ENST00000557517 POLA2Q14181 598 aa15.92■□□□□ 0.14
PSMC6-215ENST00000557517 NCOA3Q9Y6Q9 1424 aa15.91■□□□□ 0.14
PSMC6-215ENST00000557517 SLAIN2Q9P270 581 aa15.9■□□□□ 0.14
PSMC6-215ENST00000557517 PHLPP1O60346 1717 aa15.89■□□□□ 0.13
PSMC6-215ENST00000557517 ZNF326Q5BKZ1 582 aaKnown RBP15.89■□□□□ 0.13
PSMC6-215ENST00000557517 AMOTL2Q9Y2J4 779 aa15.89■□□□□ 0.13
PSMC6-215ENST00000557517 C19orf44Q9H6X5 657 aa15.88■□□□□ 0.13
PSMC6-215ENST00000557517 MSH6P52701 1360 aa15.87■□□□□ 0.13
PSMC6-215ENST00000557517 JCADQ9P266 1359 aa15.87■□□□□ 0.13
PSMC6-215ENST00000557517 COL16A1Q07092 1604 aaPredicted RBP15.86■□□□□ 0.13
PSMC6-215ENST00000557517 VGFO15240 615 aaPredicted RBP15.85■□□□□ 0.13
PSMC6-215ENST00000557517 FOXD4L1Q9NU39 408 aa15.85■□□□□ 0.13
PSMC6-215ENST00000557517 RPGRIP1LQ68CZ1 1315 aa15.85■□□□□ 0.13
PSMC6-215ENST00000557517 MPHOSPH9Q99550 1183 aa15.84■□□□□ 0.13
PSMC6-215ENST00000557517 ACIN1Q9UKV3 1341 aaKnown RBP15.84■□□□□ 0.13
PSMC6-215ENST00000557517 PTPRUQ92729 1446 aa15.84■□□□□ 0.13
PSMC6-215ENST00000557517 CHD2O14647 1828 aaKnown RBP15.83■□□□□ 0.12
PSMC6-215ENST00000557517 CADPS2Q86UW7 1296 aa15.83■□□□□ 0.12
PSMC6-215ENST00000557517 METP08581 1390 aa15.83■□□□□ 0.12
PSMC6-215ENST00000557517 TRPM2O94759 1503 aa15.83■□□□□ 0.12
PSMC6-215ENST00000557517 LRP6O75581 1613 aa15.83■□□□□ 0.12
PSMC6-215ENST00000557517 DIP2AQ14689 1571 aa15.81■□□□□ 0.12
PSMC6-215ENST00000557517 UPF1Q92900 1129 aaKnown RBP eCLIP15.81■□□□□ 0.12
PSMC6-215ENST00000557517 ATF3P18847 181 aa15.8■□□□□ 0.12
PSMC6-215ENST00000557517 C14orf37Q86TY3 774 aa15.8■□□□□ 0.12
PSMC6-215ENST00000557517 SETBP1Q9Y6X0 1596 aa15.79■□□□□ 0.12
PSMC6-215ENST00000557517 SPATA31A6Q5VVP1 1343 aa15.79■□□□□ 0.12
PSMC6-215ENST00000557517 SHPRHQ149N8 1683 aa15.79■□□□□ 0.12
PSMC6-215ENST00000557517 AHDC1Q5TGY3 1603 aaPredicted RBP15.79■□□□□ 0.12
PSMC6-215ENST00000557517 MYO5BQ9ULV0 1848 aa15.78■□□□□ 0.12
PSMC6-215ENST00000557517 SPHKAPQ2M3C7 1700 aa15.77■□□□□ 0.12
PSMC6-215ENST00000557517 CLTCL1P53675 1640 aa15.77■□□□□ 0.12
PSMC6-215ENST00000557517 NEXMIFQ5QGS0 1516 aa15.77■□□□□ 0.11
PSMC6-215ENST00000557517 ZNF772Q68DY9 489 aaPredicted RBP15.76■□□□□ 0.11
PSMC6-215ENST00000557517 CDK12Q9NYV4 1490 aaPredicted RBP15.75■□□□□ 0.11
PSMC6-215ENST00000557517 SETD5Q9C0A6 1442 aa15.75■□□□□ 0.11
PSMC6-215ENST00000557517 NRXN3Q9Y4C0 1643 aa15.74■□□□□ 0.11
PSMC6-215ENST00000557517 BRINP3Q76B58 766 aa15.73■□□□□ 0.11
PSMC6-215ENST00000557517 DCCP43146 1447 aa15.73■□□□□ 0.11
PSMC6-215ENST00000557517 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.72■□□□□ 0.11
PSMC6-215ENST00000557517 CCDC144AA2RUR9 1427 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms