RNA–Protein interactions for RNA: ENST00000557510.5

NPC2-209, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 1 (best) BASIC

Gene NPC2, Length 1,029 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-209ENST00000557510 EFCAB6Q5THR3 1501 aa14.09□□□□□ -0.15
NPC2-209ENST00000557510 KANK1Q14678 1352 aa14.09□□□□□ -0.15
NPC2-209ENST00000557510 SOCS7O14512 581 aa14.08□□□□□ -0.16
NPC2-209ENST00000557510 FAM50AQ14320 339 aaKnown RBP14.08□□□□□ -0.16
NPC2-209ENST00000557510 IDI1Q13907 227 aa14.07□□□□□ -0.16
NPC2-209ENST00000557510 KDM5AP29375 1690 aaKnown RBP14.07□□□□□ -0.16
NPC2-209ENST00000557510 TMEM2Q9UHN6 1383 aa14.07□□□□□ -0.16
NPC2-209ENST00000557510 MYO5BQ9ULV0 1848 aa14.06□□□□□ -0.16
NPC2-209ENST00000557510 MED1Q15648 1581 aaPredicted RBP14.06□□□□□ -0.16
NPC2-209ENST00000557510 NOS1P29475 1434 aa14.06□□□□□ -0.16
NPC2-209ENST00000557510 ANKRD50Q9ULJ7 1429 aa14.04□□□□□ -0.16
NPC2-209ENST00000557510 ADGRB3O60242 1522 aa14.04□□□□□ -0.16
NPC2-209ENST00000557510 TET3O43151 1660 aa14.02□□□□□ -0.16
NPC2-209ENST00000557510 STAG3Q9UJ98 1225 aa14.02□□□□□ -0.17
NPC2-209ENST00000557510 EID1Q9Y6B2 187 aa14.02□□□□□ -0.17
NPC2-209ENST00000557510 GCC2Q8IWJ2 1684 aa14.01□□□□□ -0.17
NPC2-209ENST00000557510 UNC13BO14795 1591 aa14.01□□□□□ -0.17
NPC2-209ENST00000557510 RNF39Q9H2S5 420 aa14.01□□□□□ -0.17
NPC2-209ENST00000557510 E9PCH4 1651 aa13.99□□□□□ -0.17
NPC2-209ENST00000557510 SLC26A8Q96RN1 970 aa13.99□□□□□ -0.17
NPC2-209ENST00000557510 RPRD2Q5VT52 1461 aaKnown RBP13.99□□□□□ -0.17
NPC2-209ENST00000557510 RBM33Q96EV2 1170 aaKnown RBP13.98□□□□□ -0.17
NPC2-209ENST00000557510 TMEM131LA2VDJ0 1609 aa13.97□□□□□ -0.17
NPC2-209ENST00000557510 PPARGC1BQ86YN6 1023 aaKnown RBP13.97□□□□□ -0.17
NPC2-209ENST00000557510 ZFYVE9O95405 1425 aa13.97□□□□□ -0.17
NPC2-209ENST00000557510 TMEM94Q12767 1356 aa13.96□□□□□ -0.17
NPC2-209ENST00000557510 NWD1Q149M9 1564 aa13.96□□□□□ -0.17
NPC2-209ENST00000557510 SLC52A1Q9NWF4 448 aa13.96□□□□□ -0.17
NPC2-209ENST00000557510 ZNF219Q9P2Y4 722 aaPredicted RBP13.96□□□□□ -0.17
NPC2-209ENST00000557510 IQGAP3Q86VI3 1631 aa13.95□□□□□ -0.18
NPC2-209ENST00000557510 KCNA6P17658 529 aa13.94□□□□□ -0.18
NPC2-209ENST00000557510 CHD2O14647 1828 aaKnown RBP13.94□□□□□ -0.18
NPC2-209ENST00000557510 ROCK1Q13464 1354 aa13.94□□□□□ -0.18
NPC2-209ENST00000557510 RIMS2Q9UQ26 1411 aa13.93□□□□□ -0.18
NPC2-209ENST00000557510 FKBP8Q14318 412 aa13.93□□□□□ -0.18
NPC2-209ENST00000557510 ROBO1Q9Y6N7 1651 aa13.92□□□□□ -0.18
NPC2-209ENST00000557510 ITGAEP38570 1179 aa13.92□□□□□ -0.18
NPC2-209ENST00000557510 NKTRP30414 1462 aaKnown RBP13.92□□□□□ -0.18
NPC2-209ENST00000557510 PROSER2Q86WR7 435 aaPredicted RBP13.91□□□□□ -0.18
NPC2-209ENST00000557510 BCANQ96GW7 911 aa13.91□□□□□ -0.18
NPC2-209ENST00000557510 PLEKHG1Q9ULL1 1385 aa13.91□□□□□ -0.18
NPC2-209ENST00000557510 NUTM2DQ5VT03 806 aaPredicted RBP13.9□□□□□ -0.18
NPC2-209ENST00000557510 SPINK5Q9NQ38 1064 aaPredicted RBP13.9□□□□□ -0.18
NPC2-209ENST00000557510 FAM135BQ49AJ0 1406 aa13.9□□□□□ -0.19
NPC2-209ENST00000557510 NUP155O75694 1391 aa13.89□□□□□ -0.19
NPC2-209ENST00000557510 CHGAP10645 457 aaKnown RBP13.89□□□□□ -0.19
NPC2-209ENST00000557510 PPP1R15AO75807 674 aaPredicted RBP13.88□□□□□ -0.19
NPC2-209ENST00000557510 ADAMTS13Q76LX8 1427 aa13.88□□□□□ -0.19
NPC2-209ENST00000557510 RGS17Q9UGC6 210 aaPredicted RBP13.86□□□□□ -0.19
NPC2-209ENST00000557510 SPHKAPQ2M3C7 1700 aa13.86□□□□□ -0.19
NPC2-209ENST00000557510 NRXN3Q9Y4C0 1643 aa13.84□□□□□ -0.19
NPC2-209ENST00000557510 MSH6P52701 1360 aa13.83□□□□□ -0.19
NPC2-209ENST00000557510 TBX22Q9Y458 520 aa13.83□□□□□ -0.2
NPC2-209ENST00000557510 PHLPP1O60346 1717 aa13.83□□□□□ -0.2
NPC2-209ENST00000557510 DIP2AQ14689 1571 aa13.83□□□□□ -0.2
NPC2-209ENST00000557510 PTPRUQ92729 1446 aa13.82□□□□□ -0.2
NPC2-209ENST00000557510 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.82□□□□□ -0.2
NPC2-209ENST00000557510 HDGFP51858 240 aaKnown RBP13.81□□□□□ -0.2
NPC2-209ENST00000557510 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.81□□□□□ -0.2
NPC2-209ENST00000557510 SLAIN2Q9P270 581 aa13.81□□□□□ -0.2
NPC2-209ENST00000557510 CLTCL1P53675 1640 aa13.81□□□□□ -0.2
NPC2-209ENST00000557510 RRBP1Q9P2E9 1410 aaKnown RBP13.81□□□□□ -0.2
NPC2-209ENST00000557510 C1QBPQ07021 282 aaKnown RBP13.8□□□□□ -0.2
NPC2-209ENST00000557510 TRPM2O94759 1503 aa13.8□□□□□ -0.2
NPC2-209ENST00000557510 COL16A1Q07092 1604 aaPredicted RBP13.79□□□□□ -0.2
NPC2-209ENST00000557510 XRN1Q8IZH2 1706 aaKnown RBP13.79□□□□□ -0.2
NPC2-209ENST00000557510 NAIPQ13075 1403 aa13.78□□□□□ -0.2
NPC2-209ENST00000557510 SETBP1Q9Y6X0 1596 aa13.78□□□□□ -0.2
NPC2-209ENST00000557510 POTEAQ6S8J7 498 aa13.77□□□□□ -0.21
NPC2-209ENST00000557510 PIK3R4Q99570 1358 aa13.77□□□□□ -0.21
NPC2-209ENST00000557510 AMOTL2Q9Y2J4 779 aa13.77□□□□□ -0.21
NPC2-209ENST00000557510 NEXMIFQ5QGS0 1516 aa13.76□□□□□ -0.21
NPC2-209ENST00000557510 NCOA3Q9Y6Q9 1424 aa13.76□□□□□ -0.21
NPC2-209ENST00000557510 C14orf37Q86TY3 774 aa13.76□□□□□ -0.21
NPC2-209ENST00000557510 KIF1BO60333 1816 aa13.76□□□□□ -0.21
NPC2-209ENST00000557510 METP08581 1390 aa13.74□□□□□ -0.21
NPC2-209ENST00000557510 ZNF326Q5BKZ1 582 aaKnown RBP13.74□□□□□ -0.21
NPC2-209ENST00000557510 AHDC1Q5TGY3 1603 aaPredicted RBP13.74□□□□□ -0.21
NPC2-209ENST00000557510 JCADQ9P266 1359 aa13.73□□□□□ -0.21
NPC2-209ENST00000557510 LRP6O75581 1613 aa13.73□□□□□ -0.21
NPC2-209ENST00000557510 CAPN15O75808 1086 aa13.73□□□□□ -0.21
NPC2-209ENST00000557510 C19orf44Q9H6X5 657 aa13.73□□□□□ -0.21
NPC2-209ENST00000557510 SETD1AO15047 1707 aaKnown RBP13.73□□□□□ -0.21
NPC2-209ENST00000557510 NALCNQ8IZF0 1738 aa13.71□□□□□ -0.21
NPC2-209ENST00000557510 ATF3P18847 181 aa13.71□□□□□ -0.21
NPC2-209ENST00000557510 MKRN4PQ13434 485 aaPredicted RBP13.71□□□□□ -0.21
NPC2-209ENST00000557510 CADPS2Q86UW7 1296 aa13.71□□□□□ -0.21
NPC2-209ENST00000557510 HFM1A2PYH4 1435 aa13.71□□□□□ -0.22
NPC2-209ENST00000557510 SHPRHQ149N8 1683 aa13.7□□□□□ -0.22
NPC2-209ENST00000557510 BRINP3Q76B58 766 aa13.7□□□□□ -0.22
NPC2-209ENST00000557510 MST1RQ04912 1400 aa13.69□□□□□ -0.22
NPC2-209ENST00000557510 ASXL1Q8IXJ9 1541 aa13.69□□□□□ -0.22
NPC2-209ENST00000557510 DCCP43146 1447 aa13.68□□□□□ -0.22
NPC2-209ENST00000557510 POLA2Q14181 598 aa13.68□□□□□ -0.22
NPC2-209ENST00000557510 PPLO60437 1756 aa13.68□□□□□ -0.22
NPC2-209ENST00000557510 NHSL1Q5SYE7 1610 aa13.68□□□□□ -0.22
NPC2-209ENST00000557510 TRIM52Q96A61 297 aa13.67□□□□□ -0.22
NPC2-209ENST00000557510 ADGRL3Q9HAR2 1447 aa13.66□□□□□ -0.22
NPC2-209ENST00000557510 DDX17Q92841 729 aaKnown RBP13.66□□□□□ -0.22
NPC2-209ENST00000557510 SPATA31A6Q5VVP1 1343 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms