RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 NLRP1Q9C000 1473 aa20.5■□□□□ 0.87
ARHGEF40-208ENST00000557498 ROCK2O75116 1388 aaKnown RBP20.49■□□□□ 0.87
ARHGEF40-208ENST00000557498 GPRASP1Q5JY77 1395 aa20.49■□□□□ 0.87
ARHGEF40-208ENST00000557498 CEBPAP49715 358 aaPredicted RBP20.49■□□□□ 0.87
ARHGEF40-208ENST00000557498 EIF4G2P78344 907 aaKnown RBP eCLIP20.49■□□□□ 0.87
ARHGEF40-208ENST00000557498 UBR1Q8IWV7 1749 aa20.47■□□□□ 0.87
ARHGEF40-208ENST00000557498 ADGRF5Q8IZF2 1346 aa20.47■□□□□ 0.87
ARHGEF40-208ENST00000557498 ZFYVE9O95405 1425 aa20.46■□□□□ 0.87
ARHGEF40-208ENST00000557498 HSPA5P11021 654 aaKnown RBP20.46■□□□□ 0.87
ARHGEF40-208ENST00000557498 STAG3Q9UJ98 1225 aa20.46■□□□□ 0.87
ARHGEF40-208ENST00000557498 MYO3AQ8NEV4 1616 aa20.45■□□□□ 0.87
ARHGEF40-208ENST00000557498 PIK3C2GO75747 1445 aa20.45■□□□□ 0.86
ARHGEF40-208ENST00000557498 CARD11Q9BXL7 1154 aa20.45■□□□□ 0.86
ARHGEF40-208ENST00000557498 USP47Q96K76 1375 aa20.45■□□□□ 0.86
ARHGEF40-208ENST00000557498 VGFO15240 615 aaPredicted RBP20.42■□□□□ 0.86
ARHGEF40-208ENST00000557498 NBPF1Q3BBV0 1214 aa20.42■□□□□ 0.86
ARHGEF40-208ENST00000557498 IQGAP1P46940 1657 aa20.42■□□□□ 0.86
ARHGEF40-208ENST00000557498 PLPPR3Q6T4P5 718 aa20.41■□□□□ 0.86
ARHGEF40-208ENST00000557498 HIRIP3Q9BW71 556 aaPredicted RBP20.41■□□□□ 0.86
ARHGEF40-208ENST00000557498 RIMS2Q9UQ26 1411 aa20.41■□□□□ 0.86
ARHGEF40-208ENST00000557498 SETBP1Q9Y6X0 1596 aa20.41■□□□□ 0.86
ARHGEF40-208ENST00000557498 CFAP70Q5T0N1 1121 aa20.37■□□□□ 0.85
ARHGEF40-208ENST00000557498 CEP170BQ9Y4F5 1589 aaPredicted RBP20.37■□□□□ 0.85
ARHGEF40-208ENST00000557498 PTPRMP28827 1452 aa20.37■□□□□ 0.85
ARHGEF40-208ENST00000557498 ZNF142P52746 1687 aaPredicted RBP20.36■□□□□ 0.85
ARHGEF40-208ENST00000557498 NUTM2DQ5VT03 806 aaPredicted RBP20.36■□□□□ 0.85
ARHGEF40-208ENST00000557498 SCAF11Q99590 1463 aaKnown RBP20.36■□□□□ 0.85
ARHGEF40-208ENST00000557498 POLR1AO95602 1720 aaPredicted RBP20.36■□□□□ 0.85
ARHGEF40-208ENST00000557498 ADGRB1O14514 1584 aa20.35■□□□□ 0.85
ARHGEF40-208ENST00000557498 C14orf93Q9H972 538 aaKnown RBP20.35■□□□□ 0.85
ARHGEF40-208ENST00000557498 TMEM2Q9UHN6 1383 aa20.34■□□□□ 0.85
ARHGEF40-208ENST00000557498 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.34■□□□□ 0.85
ARHGEF40-208ENST00000557498 SLIT1O75093 1534 aa20.32■□□□□ 0.84
ARHGEF40-208ENST00000557498 ARHGAP23Q9P227 1491 aa20.32■□□□□ 0.84
ARHGEF40-208ENST00000557498 DIEXFQ68CQ4 756 aaKnown RBP20.31■□□□□ 0.84
ARHGEF40-208ENST00000557498 ASXL1Q8IXJ9 1541 aa20.31■□□□□ 0.84
ARHGEF40-208ENST00000557498 NRXN3Q9Y4C0 1643 aa20.31■□□□□ 0.84
ARHGEF40-208ENST00000557498 HDGFP51858 240 aaKnown RBP20.3■□□□□ 0.84
ARHGEF40-208ENST00000557498 ALKQ9UM73 1620 aa20.3■□□□□ 0.84
ARHGEF40-208ENST00000557498 SETD1BQ9UPS6 1966 aaKnown RBP20.3■□□□□ 0.84
ARHGEF40-208ENST00000557498 SETD1AO15047 1707 aaKnown RBP20.3■□□□□ 0.84
ARHGEF40-208ENST00000557498 ST20-MTHFSA0A0A6YYL1 179 aa20.29■□□□□ 0.84
ARHGEF40-208ENST00000557498 EIF3AQ14152 1382 aaKnown RBP20.28■□□□□ 0.84
ARHGEF40-208ENST00000557498 WASHC2AQ641Q2 1341 aa20.27■□□□□ 0.83
ARHGEF40-208ENST00000557498 CCDC7Q96M83 1385 aa20.26■□□□□ 0.83
ARHGEF40-208ENST00000557498 THEMISQ8N1K5 641 aaPredicted RBP20.26■□□□□ 0.83
ARHGEF40-208ENST00000557498 C11orf95C9JLR9 678 aaPredicted RBP20.24■□□□□ 0.83
ARHGEF40-208ENST00000557498 ARHGEF28Q8N1W1 1705 aaKnown RBP20.24■□□□□ 0.83
ARHGEF40-208ENST00000557498 PLEKHG1Q9ULL1 1385 aa20.23■□□□□ 0.83
ARHGEF40-208ENST00000557498 KIF7Q2M1P5 1343 aa20.23■□□□□ 0.83
ARHGEF40-208ENST00000557498 TMEM132EQ6IEE7 984 aa20.22■□□□□ 0.83
ARHGEF40-208ENST00000557498 EID1Q9Y6B2 187 aa20.22■□□□□ 0.83
ARHGEF40-208ENST00000557498 TXNDC2Q86VQ3 553 aa20.21■□□□□ 0.83
ARHGEF40-208ENST00000557498 TESK2Q96S53 571 aa20.21■□□□□ 0.83
ARHGEF40-208ENST00000557498 LTKP29376 864 aa20.2■□□□□ 0.82
ARHGEF40-208ENST00000557498 SENP3Q9H4L4 574 aaPredicted RBP20.2■□□□□ 0.82
ARHGEF40-208ENST00000557498 QRICH2Q9H0J4 1663 aa20.19■□□□□ 0.82
ARHGEF40-208ENST00000557498 YTHDC2Q9H6S0 1430 aaKnown RBP20.19■□□□□ 0.82
ARHGEF40-208ENST00000557498 DDX10Q13206 875 aaKnown RBP20.19■□□□□ 0.82
ARHGEF40-208ENST00000557498 ADAMTS13Q76LX8 1427 aa20.19■□□□□ 0.82
ARHGEF40-208ENST00000557498 KDM4FA0A1W2PPD8 638 aa20.18■□□□□ 0.82
ARHGEF40-208ENST00000557498 TRAK1Q9UPV9 953 aa20.18■□□□□ 0.82
ARHGEF40-208ENST00000557498 SBNO2Q9Y2G9 1366 aa20.17■□□□□ 0.82
ARHGEF40-208ENST00000557498 DLC1Q96QB1 1528 aa20.17■□□□□ 0.82
ARHGEF40-208ENST00000557498 DIP2AQ14689 1571 aa20.17■□□□□ 0.82
ARHGEF40-208ENST00000557498 KNDC1Q76NI1 1749 aa20.16■□□□□ 0.82
ARHGEF40-208ENST00000557498 CENPJQ9HC77 1338 aaPredicted RBP20.16■□□□□ 0.82
ARHGEF40-208ENST00000557498 LRPPRCP42704 1394 aaKnown RBP20.16■□□□□ 0.82
ARHGEF40-208ENST00000557498 DISP3Q9P2K9 1392 aa20.16■□□□□ 0.82
ARHGEF40-208ENST00000557498 MED14O60244 1454 aa20.16■□□□□ 0.82
ARHGEF40-208ENST00000557498 TMF1P82094 1093 aa20.15■□□□□ 0.82
ARHGEF40-208ENST00000557498 BCANQ96GW7 911 aa20.14■□□□□ 0.81
ARHGEF40-208ENST00000557498 METP08581 1390 aa20.13■□□□□ 0.81
ARHGEF40-208ENST00000557498 SLC24A1O60721 1099 aa20.12■□□□□ 0.81
ARHGEF40-208ENST00000557498 STK26Q9P289 416 aa20.11■□□□□ 0.81
ARHGEF40-208ENST00000557498 ABCC11Q96J66 1382 aa20.1■□□□□ 0.81
ARHGEF40-208ENST00000557498 ANKLE2Q86XL3 938 aa20.1■□□□□ 0.81
ARHGEF40-208ENST00000557498 POLR3GLQ9BT43 218 aa20.1■□□□□ 0.81
ARHGEF40-208ENST00000557498 CPS1P31327 1500 aa20.1■□□□□ 0.81
ARHGEF40-208ENST00000557498 TECPR2O15040 1411 aa20.1■□□□□ 0.81
ARHGEF40-208ENST00000557498 TBX22Q9Y458 520 aa20.08■□□□□ 0.81
ARHGEF40-208ENST00000557498 CDCA8Q53HL2 280 aa20.07■□□□□ 0.8
ARHGEF40-208ENST00000557498 SLC26A8Q96RN1 970 aa20.06■□□□□ 0.8
ARHGEF40-208ENST00000557498 FAM135BQ49AJ0 1406 aa20.05■□□□□ 0.8
ARHGEF40-208ENST00000557498 TULP4Q9NRJ4 1543 aa20.05■□□□□ 0.8
ARHGEF40-208ENST00000557498 NPHP4O75161 1426 aaPredicted RBP20.04■□□□□ 0.8
ARHGEF40-208ENST00000557498 PRAM1Q96QH2 718 aa20.04■□□□□ 0.8
ARHGEF40-208ENST00000557498 XRN1Q8IZH2 1706 aaKnown RBP20.04■□□□□ 0.8
ARHGEF40-208ENST00000557498 MYOM1P52179 1685 aa20.03■□□□□ 0.8
ARHGEF40-208ENST00000557498 PTPRUQ92729 1446 aa20.03■□□□□ 0.8
ARHGEF40-208ENST00000557498 SIRT1Q96EB6 747 aa20.03■□□□□ 0.8
ARHGEF40-208ENST00000557498 POGKQ9P215 609 aa20.03■□□□□ 0.8
ARHGEF40-208ENST00000557498 MIER1Q8N108 512 aa20.02■□□□□ 0.8
ARHGEF40-208ENST00000557498 PIK3R4Q99570 1358 aa20.02■□□□□ 0.8
ARHGEF40-208ENST00000557498 LMTK3Q96Q04 1460 aa20.01■□□□□ 0.79
ARHGEF40-208ENST00000557498 PLEKHH1Q9ULM0 1364 aa20■□□□□ 0.79
ARHGEF40-208ENST00000557498 PTCH1Q13635 1447 aa20■□□□□ 0.79
ARHGEF40-208ENST00000557498 EVC2Q86UK5 1308 aa20■□□□□ 0.79
ARHGEF40-208ENST00000557498 SAFB2Q14151 953 aaKnown RBP eCLIP19.99■□□□□ 0.79
ARHGEF40-208ENST00000557498 NCKAP5LQ9HCH0 1330 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms