RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 NGLY1Q96IV0 654 aa15.5■□□□□ 0.07
NEDD1-211ENST00000557454 CFAP65Q6ZU64 1925 aaKnown RBP15.5■□□□□ 0.07
NEDD1-211ENST00000557454 MAST1Q9Y2H9 1570 aa15.49■□□□□ 0.07
NEDD1-211ENST00000557454 EFCAB6Q5THR3 1501 aa15.49■□□□□ 0.07
NEDD1-211ENST00000557454 CEP152O94986 1710 aa15.49■□□□□ 0.07
NEDD1-211ENST00000557454 LRP5O75197 1615 aa15.48■□□□□ 0.07
NEDD1-211ENST00000557454 C14orf37Q86TY3 774 aa15.48■□□□□ 0.07
NEDD1-211ENST00000557454 BRINP3Q76B58 766 aa15.47■□□□□ 0.07
NEDD1-211ENST00000557454 BCANQ96GW7 911 aa15.47■□□□□ 0.07
NEDD1-211ENST00000557454 CADPS2Q86UW7 1296 aa15.46■□□□□ 0.07
NEDD1-211ENST00000557454 ARHGAP31Q2M1Z3 1444 aa15.45■□□□□ 0.06
NEDD1-211ENST00000557454 SETD5Q9C0A6 1442 aa15.45■□□□□ 0.06
NEDD1-211ENST00000557454 NCOA3Q9Y6Q9 1424 aa15.44■□□□□ 0.06
NEDD1-211ENST00000557454 ATF3P18847 181 aa15.44■□□□□ 0.06
NEDD1-211ENST00000557454 EIF2AK4Q9P2K8 1649 aaKnown RBP15.43■□□□□ 0.06
NEDD1-211ENST00000557454 RSPH4AQ5TD94 716 aa15.43■□□□□ 0.06
NEDD1-211ENST00000557454 CCDC125Q86Z20 511 aa15.43■□□□□ 0.06
NEDD1-211ENST00000557454 TSPY4P0CV99 314 aa15.42■□□□□ 0.06
NEDD1-211ENST00000557454 TSPY10P0CW01 314 aa15.42■□□□□ 0.06
NEDD1-211ENST00000557454 PNPLA6Q8IY17 1366 aa15.41■□□□□ 0.06
NEDD1-211ENST00000557454 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.41■□□□□ 0.06
NEDD1-211ENST00000557454 ADAMTS2O95450 1211 aa15.41■□□□□ 0.06
NEDD1-211ENST00000557454 IDI1Q13907 227 aa15.41■□□□□ 0.06
NEDD1-211ENST00000557454 C19orf44Q9H6X5 657 aa15.41■□□□□ 0.06
NEDD1-211ENST00000557454 ASXL1Q8IXJ9 1541 aa15.41■□□□□ 0.06
NEDD1-211ENST00000557454 CEP162Q5TB80 1403 aa15.4■□□□□ 0.06
NEDD1-211ENST00000557454 ARHGEF5Q12774 1597 aa15.4■□□□□ 0.06
NEDD1-211ENST00000557454 EHBP1L1Q8N3D4 1523 aa15.39■□□□□ 0.05
NEDD1-211ENST00000557454 CHD2O14647 1828 aaKnown RBP15.39■□□□□ 0.05
NEDD1-211ENST00000557454 USP21Q9UK80 565 aa15.39■□□□□ 0.05
NEDD1-211ENST00000557454 LRRC59Q96AG4 307 aaKnown RBP15.38■□□□□ 0.05
NEDD1-211ENST00000557454 TRPC5Q9UL62 973 aaPredicted RBP15.38■□□□□ 0.05
NEDD1-211ENST00000557454 ADGRB3O60242 1522 aa15.38■□□□□ 0.05
NEDD1-211ENST00000557454 DEFB132Q7Z7B7 95 aa15.37■□□□□ 0.05
NEDD1-211ENST00000557454 PLEKHG1Q9ULL1 1385 aa15.36■□□□□ 0.05
NEDD1-211ENST00000557454 ATRNO75882 1429 aa15.36■□□□□ 0.05
NEDD1-211ENST00000557454 NHSL1Q5SYE7 1610 aa15.35■□□□□ 0.05
NEDD1-211ENST00000557454 BLMP54132 1417 aaPredicted RBP15.35■□□□□ 0.05
NEDD1-211ENST00000557454 YY1P25490 414 aa15.35■□□□□ 0.05
NEDD1-211ENST00000557454 DDX17Q92841 729 aaKnown RBP15.35■□□□□ 0.05
NEDD1-211ENST00000557454 PSDA5PKW4 1024 aaPredicted RBP15.33■□□□□ 0.04
NEDD1-211ENST00000557454 IFFO2Q5TF58 517 aa15.33■□□□□ 0.04
NEDD1-211ENST00000557454 ZFYVE9O95405 1425 aa15.33■□□□□ 0.04
NEDD1-211ENST00000557454 PPP1R15AO75807 674 aaPredicted RBP15.32■□□□□ 0.04
NEDD1-211ENST00000557454 HRCP23327 699 aa15.32■□□□□ 0.04
NEDD1-211ENST00000557454 FNBP4Q8N3X1 1017 aaPredicted RBP15.31■□□□□ 0.04
NEDD1-211ENST00000557454 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.31■□□□□ 0.04
NEDD1-211ENST00000557454 TBX22Q9Y458 520 aa15.31■□□□□ 0.04
NEDD1-211ENST00000557454 DCCP43146 1447 aa15.31■□□□□ 0.04
NEDD1-211ENST00000557454 MST1RQ04912 1400 aa15.31■□□□□ 0.04
NEDD1-211ENST00000557454 DUOX2Q9NRD8 1548 aa15.3■□□□□ 0.04
NEDD1-211ENST00000557454 BCL9LQ86UU0 1499 aa15.29■□□□□ 0.04
NEDD1-211ENST00000557454 RIMS2Q9UQ26 1411 aa15.29■□□□□ 0.04
NEDD1-211ENST00000557454 NOS1P29475 1434 aa15.27■□□□□ 0.04
NEDD1-211ENST00000557454 ADAMTS13Q76LX8 1427 aa15.27■□□□□ 0.04
NEDD1-211ENST00000557454 PTCH1Q13635 1447 aa15.26■□□□□ 0.03
NEDD1-211ENST00000557454 SF3B2Q13435 895 aaKnown RBP15.26■□□□□ 0.03
NEDD1-211ENST00000557454 KANK1Q14678 1352 aa15.24■□□□□ 0.03
NEDD1-211ENST00000557454 SLC52A1Q9NWF4 448 aa15.24■□□□□ 0.03
NEDD1-211ENST00000557454 PTPRUQ92729 1446 aa15.24■□□□□ 0.03
NEDD1-211ENST00000557454 ERBINQ96RT1 1412 aa15.24■□□□□ 0.03
NEDD1-211ENST00000557454 PIK3R4Q99570 1358 aa15.24■□□□□ 0.03
NEDD1-211ENST00000557454 KIF15Q9NS87 1388 aa15.24■□□□□ 0.03
NEDD1-211ENST00000557454 LMTK2Q8IWU2 1503 aa15.23■□□□□ 0.03
NEDD1-211ENST00000557454 GJD4Q96KN9 370 aaPredicted RBP15.23■□□□□ 0.03
NEDD1-211ENST00000557454 AMOTL2Q9Y2J4 779 aa15.23■□□□□ 0.03
NEDD1-211ENST00000557454 TRPM2O94759 1503 aa15.22■□□□□ 0.03
NEDD1-211ENST00000557454 HDGFP51858 240 aaKnown RBP15.21■□□□□ 0.03
NEDD1-211ENST00000557454 UNC13BO14795 1591 aa15.2■□□□□ 0.02
NEDD1-211ENST00000557454 POTEDQ86YR6 584 aa15.2■□□□□ 0.02
NEDD1-211ENST00000557454 RRP7BPQ9NSQ0 103 aa15.18■□□□□ 0.02
NEDD1-211ENST00000557454 MYO5BQ9ULV0 1848 aa15.17■□□□□ 0.02
NEDD1-211ENST00000557454 RALGAPBQ86X10 1494 aa15.17■□□□□ 0.02
NEDD1-211ENST00000557454 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.17■□□□□ 0.02
NEDD1-211ENST00000557454 SOS2Q07890 1332 aaPredicted RBP15.17■□□□□ 0.02
NEDD1-211ENST00000557454 GCC2Q8IWJ2 1684 aa15.16■□□□□ 0.02
NEDD1-211ENST00000557454 GLI3P10071 1580 aa15.16■□□□□ 0.02
NEDD1-211ENST00000557454 MYOM2P54296 1465 aa15.16■□□□□ 0.02
NEDD1-211ENST00000557454 R3HDM1Q15032 1099 aaKnown RBP15.16■□□□□ 0.02
NEDD1-211ENST00000557454 TMEM131LA2VDJ0 1609 aa15.15■□□□□ 0.02
NEDD1-211ENST00000557454 SENP3-EIF4A1A0A087X0R7 540 aa15.15■□□□□ 0.02
NEDD1-211ENST00000557454 ADGRL3Q9HAR2 1447 aa15.15■□□□□ 0.02
NEDD1-211ENST00000557454 C1orf167Q5SNV9 1468 aa15.14■□□□□ 0.01
NEDD1-211ENST00000557454 BAG6P46379 1132 aa15.14■□□□□ 0.01
NEDD1-211ENST00000557454 XRN1Q8IZH2 1706 aaKnown RBP15.14■□□□□ 0.01
NEDD1-211ENST00000557454 CHGAP10645 457 aaKnown RBP15.13■□□□□ 0.01
NEDD1-211ENST00000557454 SPHKAPQ2M3C7 1700 aa15.13■□□□□ 0.01
NEDD1-211ENST00000557454 LAMC1P11047 1609 aa15.13■□□□□ 0.01
NEDD1-211ENST00000557454 COL22A1Q8NFW1 1626 aaPredicted RBP15.13■□□□□ 0.01
NEDD1-211ENST00000557454 SEPT12Q8IYM1 358 aa15.12■□□□□ 0.01
NEDD1-211ENST00000557454 BRWD3Q6RI45 1802 aa15.12■□□□□ 0.01
NEDD1-211ENST00000557454 MYOM3Q5VTT5 1437 aa15.11■□□□□ 0.01
NEDD1-211ENST00000557454 UNC5CLQ8IV45 518 aa15.1■□□□□ 0.01
NEDD1-211ENST00000557454 ORAI2Q96SN7 254 aa15.1■□□□□ 0.01
NEDD1-211ENST00000557454 EN1Q05925 392 aaPredicted RBP15.09■□□□□ 0.01
NEDD1-211ENST00000557454 NALCNQ8IZF0 1738 aa15.09■□□□□ 0.01
NEDD1-211ENST00000557454 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.09■□□□□ 0.01
NEDD1-211ENST00000557454 RPRD2Q5VT52 1461 aaKnown RBP15.08■□□□□ 0.01
NEDD1-211ENST00000557454 KRT27Q7Z3Y8 459 aa15.07■□□□□ 0
NEDD1-211ENST00000557454 ABCC5O15440 1437 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms