RNA–Protein interactions for RNA: ENST00000557428.1

PCNX1-215, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 541 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-215ENST00000557428 SLAIN2Q9P270 581 aa12.75□□□□□ -0.37
PCNX1-215ENST00000557428 CHD2O14647 1828 aaKnown RBP12.74□□□□□ -0.37
PCNX1-215ENST00000557428 GCC2Q8IWJ2 1684 aa12.74□□□□□ -0.37
PCNX1-215ENST00000557428 PTPN23Q9H3S7 1636 aa12.74□□□□□ -0.37
PCNX1-215ENST00000557428 PPP1R15AO75807 674 aaPredicted RBP12.74□□□□□ -0.37
PCNX1-215ENST00000557428 IDI1Q13907 227 aa12.74□□□□□ -0.37
PCNX1-215ENST00000557428 UPF1Q92900 1129 aaKnown RBP eCLIP12.74□□□□□ -0.37
PCNX1-215ENST00000557428 SHPRHQ149N8 1683 aa12.73□□□□□ -0.37
PCNX1-215ENST00000557428 VPS8Q8N3P4 1428 aa12.72□□□□□ -0.37
PCNX1-215ENST00000557428 KANK4Q5T7N3 995 aaPredicted RBP12.72□□□□□ -0.37
PCNX1-215ENST00000557428 ZNF772Q68DY9 489 aaPredicted RBP12.72□□□□□ -0.37
PCNX1-215ENST00000557428 ABCC5O15440 1437 aa12.71□□□□□ -0.37
PCNX1-215ENST00000557428 NUTM2BA6NNL0 878 aaPredicted RBP12.71□□□□□ -0.37
PCNX1-215ENST00000557428 NUTM2EB1AL46 878 aaPredicted RBP12.71□□□□□ -0.37
PCNX1-215ENST00000557428 NUTM2AQ8IVF1 878 aaPredicted RBP12.71□□□□□ -0.37
PCNX1-215ENST00000557428 CHIC2Q9UKJ5 165 aa12.71□□□□□ -0.37
PCNX1-215ENST00000557428 SPATA31A6Q5VVP1 1343 aa12.7□□□□□ -0.38
PCNX1-215ENST00000557428 LMTK2Q8IWU2 1503 aa12.7□□□□□ -0.38
PCNX1-215ENST00000557428 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.7□□□□□ -0.38
PCNX1-215ENST00000557428 DAPK1P53355 1430 aa12.7□□□□□ -0.38
PCNX1-215ENST00000557428 FGD6Q6ZV73 1430 aa12.69□□□□□ -0.38
PCNX1-215ENST00000557428 AHDC1Q5TGY3 1603 aaPredicted RBP12.69□□□□□ -0.38
PCNX1-215ENST00000557428 CHGAP10645 457 aaKnown RBP12.68□□□□□ -0.38
PCNX1-215ENST00000557428 RXRBP28702 533 aa12.68□□□□□ -0.38
PCNX1-215ENST00000557428 NOS1P29475 1434 aa12.68□□□□□ -0.38
PCNX1-215ENST00000557428 RIMS2Q9UQ26 1411 aa12.68□□□□□ -0.38
PCNX1-215ENST00000557428 PLEKHG1Q9ULL1 1385 aa12.68□□□□□ -0.38
PCNX1-215ENST00000557428 ATF3P18847 181 aa12.67□□□□□ -0.38
PCNX1-215ENST00000557428 ANKRD30AQ9BXX3 1397 aa12.67□□□□□ -0.38
PCNX1-215ENST00000557428 NUTM2DQ5VT03 806 aaPredicted RBP12.66□□□□□ -0.38
PCNX1-215ENST00000557428 ZFYVE9O95405 1425 aa12.65□□□□□ -0.38
PCNX1-215ENST00000557428 SLC52A1Q9NWF4 448 aa12.65□□□□□ -0.38
PCNX1-215ENST00000557428 AFF2P51816 1311 aa12.64□□□□□ -0.39
PCNX1-215ENST00000557428 TMEM131LA2VDJ0 1609 aa12.64□□□□□ -0.39
PCNX1-215ENST00000557428 CADPS2Q86UW7 1296 aa12.64□□□□□ -0.39
PCNX1-215ENST00000557428 HDGFP51858 240 aaKnown RBP12.63□□□□□ -0.39
PCNX1-215ENST00000557428 DIP2AQ14689 1571 aa12.63□□□□□ -0.39
PCNX1-215ENST00000557428 CDK12Q9NYV4 1490 aaPredicted RBP12.61□□□□□ -0.39
PCNX1-215ENST00000557428 APLP2Q06481 763 aa12.61□□□□□ -0.39
PCNX1-215ENST00000557428 C8orf37Q96NL8 207 aa12.61□□□□□ -0.39
PCNX1-215ENST00000557428 TRPM2O94759 1503 aa12.61□□□□□ -0.39
PCNX1-215ENST00000557428 ASXL1Q8IXJ9 1541 aa12.61□□□□□ -0.39
PCNX1-215ENST00000557428 RGS12O14924 1447 aa12.61□□□□□ -0.39
PCNX1-215ENST00000557428 NCOA3Q9Y6Q9 1424 aa12.61□□□□□ -0.39
PCNX1-215ENST00000557428 RPRD2Q5VT52 1461 aaKnown RBP12.6□□□□□ -0.39
PCNX1-215ENST00000557428 BRINP3Q76B58 766 aa12.6□□□□□ -0.39
PCNX1-215ENST00000557428 C19orf44Q9H6X5 657 aa12.6□□□□□ -0.39
PCNX1-215ENST00000557428 NHSL1Q5SYE7 1610 aa12.59□□□□□ -0.39
PCNX1-215ENST00000557428 KCNA4P22459 653 aa12.59□□□□□ -0.39
PCNX1-215ENST00000557428 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.59□□□□□ -0.39
PCNX1-215ENST00000557428 TBX22Q9Y458 520 aa12.59□□□□□ -0.39
PCNX1-215ENST00000557428 ADAMTS13Q76LX8 1427 aa12.59□□□□□ -0.39
PCNX1-215ENST00000557428 E9PCH4 1651 aa12.57□□□□□ -0.4
PCNX1-215ENST00000557428 LOC105371045A0A1W2PR82 267 aa12.57□□□□□ -0.4
PCNX1-215ENST00000557428 PPP4R3CPQ6ZMV5 832 aa12.57□□□□□ -0.4
PCNX1-215ENST00000557428 UNC13BO14795 1591 aa12.56□□□□□ -0.4
PCNX1-215ENST00000557428 ANKRD50Q9ULJ7 1429 aa12.56□□□□□ -0.4
PCNX1-215ENST00000557428 FAM50AQ14320 339 aaKnown RBP12.56□□□□□ -0.4
PCNX1-215ENST00000557428 QTRT2Q9H974 415 aaKnown RBP12.56□□□□□ -0.4
PCNX1-215ENST00000557428 AMOTL2Q9Y2J4 779 aa12.56□□□□□ -0.4
PCNX1-215ENST00000557428 ADGRL2O95490 1459 aa12.56□□□□□ -0.4
PCNX1-215ENST00000557428 PTPRUQ92729 1446 aa12.55□□□□□ -0.4
PCNX1-215ENST00000557428 RBM6P78332 1123 aaKnown RBP12.55□□□□□ -0.4
PCNX1-215ENST00000557428 DDX17Q92841 729 aaKnown RBP12.55□□□□□ -0.4
PCNX1-215ENST00000557428 PIK3R4Q99570 1358 aa12.55□□□□□ -0.4
PCNX1-215ENST00000557428 SETD5Q9C0A6 1442 aa12.54□□□□□ -0.4
PCNX1-215ENST00000557428 XRN1Q8IZH2 1706 aaKnown RBP12.54□□□□□ -0.4
PCNX1-215ENST00000557428 SRCAPQ6ZRS2 3230 aa12.54□□□□□ -0.4
PCNX1-215ENST00000557428 ADAMTS2O95450 1211 aa12.54□□□□□ -0.4
PCNX1-215ENST00000557428 DCCP43146 1447 aa12.54□□□□□ -0.4
PCNX1-215ENST00000557428 MST1RQ04912 1400 aa12.54□□□□□ -0.4
PCNX1-215ENST00000557428 LRRC59Q96AG4 307 aaKnown RBP12.53□□□□□ -0.4
PCNX1-215ENST00000557428 NGLY1Q96IV0 654 aa12.53□□□□□ -0.4
PCNX1-215ENST00000557428 NALCNQ8IZF0 1738 aa12.53□□□□□ -0.4
PCNX1-215ENST00000557428 ATAD2Q6PL18 1390 aa12.53□□□□□ -0.4
PCNX1-215ENST00000557428 PNPLA6Q8IY17 1366 aa12.53□□□□□ -0.4
PCNX1-215ENST00000557428 NRXN3Q9Y4C0 1643 aa12.51□□□□□ -0.41
PCNX1-215ENST00000557428 MSH5O43196 834 aa12.5□□□□□ -0.41
PCNX1-215ENST00000557428 ZRANB1Q9UGI0 708 aa12.5□□□□□ -0.41
PCNX1-215ENST00000557428 IQGAP3Q86VI3 1631 aa12.5□□□□□ -0.41
PCNX1-215ENST00000557428 SETBP1Q9Y6X0 1596 aa12.49□□□□□ -0.41
PCNX1-215ENST00000557428 ZNF326Q5BKZ1 582 aaKnown RBP12.49□□□□□ -0.41
PCNX1-215ENST00000557428 USP21Q9UK80 565 aa12.48□□□□□ -0.41
PCNX1-215ENST00000557428 SPHKAPQ2M3C7 1700 aa12.48□□□□□ -0.41
PCNX1-215ENST00000557428 ADGRL3Q9HAR2 1447 aa12.47□□□□□ -0.41
PCNX1-215ENST00000557428 METP08581 1390 aa12.45□□□□□ -0.42
PCNX1-215ENST00000557428 TRPC5Q9UL62 973 aaPredicted RBP12.45□□□□□ -0.42
PCNX1-215ENST00000557428 EP400Q96L91 3159 aa12.45□□□□□ -0.42
PCNX1-215ENST00000557428 C1orf167Q5SNV9 1468 aa12.44□□□□□ -0.42
PCNX1-215ENST00000557428 NUP155O75694 1391 aa12.43□□□□□ -0.42
PCNX1-215ENST00000557428 MARF1Q9Y4F3 1742 aaKnown RBP12.42□□□□□ -0.42
PCNX1-215ENST00000557428 ATRNO75882 1429 aa12.42□□□□□ -0.42
PCNX1-215ENST00000557428 ITGAEP38570 1179 aa12.41□□□□□ -0.42
PCNX1-215ENST00000557428 PTCH1Q13635 1447 aa12.41□□□□□ -0.42
PCNX1-215ENST00000557428 ORAI2Q96SN7 254 aa12.41□□□□□ -0.42
PCNX1-215ENST00000557428 KIF1BO60333 1816 aa12.41□□□□□ -0.42
PCNX1-215ENST00000557428 LAMC1P11047 1609 aa12.4□□□□□ -0.42
PCNX1-215ENST00000557428 COL22A1Q8NFW1 1626 aaPredicted RBP12.4□□□□□ -0.42
PCNX1-215ENST00000557428 CLTCL1P53675 1640 aa12.4□□□□□ -0.42
PCNX1-215ENST00000557428 NEXMIFQ5QGS0 1516 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms