RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 SF3A1Q15459 793 aaKnown RBP10.29□□□□□ -0.76
CHD8-213ENST00000557364 HOOK1Q9UJC3 728 aaKnown RBP10.29□□□□□ -0.76
CHD8-213ENST00000557364 TRDNQ13061 729 aa10.28□□□□□ -0.76
CHD8-213ENST00000557364 RNF20Q5VTR2 975 aa10.28□□□□□ -0.76
CHD8-213ENST00000557364 TPM3P06753 285 aa10.28□□□□□ -0.76
CHD8-213ENST00000557364 TPM1P09493 284 aa10.28□□□□□ -0.76
CHD8-213ENST00000557364 PRM3Q9NNZ6 103 aa10.28□□□□□ -0.76
CHD8-213ENST00000557364 HECW1Q76N89 1606 aa10.28□□□□□ -0.76
CHD8-213ENST00000557364 TRIM29Q14134 588 aa10.28□□□□□ -0.76
CHD8-213ENST00000557364 ERICH3Q5RHP9 1530 aa10.28□□□□□ -0.76
CHD8-213ENST00000557364 NUTM2DQ5VT03 806 aaPredicted RBP10.27□□□□□ -0.76
CHD8-213ENST00000557364 NUTM2FA1L443 756 aa10.27□□□□□ -0.77
CHD8-213ENST00000557364 ZKSCAN1P17029 563 aaPredicted RBP10.27□□□□□ -0.77
CHD8-213ENST00000557364 SYTL4Q96C24 671 aaPredicted RBP10.27□□□□□ -0.77
CHD8-213ENST00000557364 ZKSCAN2Q63HK3 967 aa10.27□□□□□ -0.77
CHD8-213ENST00000557364 MINK1Q8N4C8 1332 aaPredicted RBP10.27□□□□□ -0.77
CHD8-213ENST00000557364 ERICH2A1L162 156 aa10.27□□□□□ -0.77
CHD8-213ENST00000557364 MFAP1P55081 439 aaKnown RBP10.27□□□□□ -0.77
CHD8-213ENST00000557364 DIAPH3Q9NSV4 1193 aa10.27□□□□□ -0.77
CHD8-213ENST00000557364 H3BQV1 296 aa10.26□□□□□ -0.77
CHD8-213ENST00000557364 IFFO2Q5TF58 517 aa10.26□□□□□ -0.77
CHD8-213ENST00000557364 REC8O95072 547 aa10.26□□□□□ -0.77
CHD8-213ENST00000557364 USP47Q96K76 1375 aa10.26□□□□□ -0.77
CHD8-213ENST00000557364 SLC52A1Q9NWF4 448 aa10.26□□□□□ -0.77
CHD8-213ENST00000557364 FAM184AQ8NB25 1140 aa10.26□□□□□ -0.77
CHD8-213ENST00000557364 CCDC43Q96MW1 224 aaKnown RBP10.26□□□□□ -0.77
CHD8-213ENST00000557364 GNAI1P63096 354 aa10.25□□□□□ -0.77
CHD8-213ENST00000557364 G3BP1Q13283 466 aaKnown RBP eCLIP10.25□□□□□ -0.771e-6■■■□□ 17.8
CHD8-213ENST00000557364 ANKRD20A12PQ8NF67 263 aa10.25□□□□□ -0.77
CHD8-213ENST00000557364 B4GALNT3Q6L9W6 998 aa10.25□□□□□ -0.77
CHD8-213ENST00000557364 CC2D2AQ9P2K1 1620 aa10.25□□□□□ -0.77
CHD8-213ENST00000557364 CASKIN1Q8WXD9 1431 aa10.25□□□□□ -0.77
CHD8-213ENST00000557364 DDX19BQ9UMR2 479 aa10.25□□□□□ -0.77
CHD8-213ENST00000557364 HFM1A2PYH4 1435 aa10.25□□□□□ -0.77
CHD8-213ENST00000557364 ERC2O15083 957 aa10.25□□□□□ -0.77
CHD8-213ENST00000557364 TPD52L1Q16890 204 aaPredicted RBP10.25□□□□□ -0.77
CHD8-213ENST00000557364 PANK3Q9H999 370 aa10.24□□□□□ -0.77
CHD8-213ENST00000557364 PRG4Q92954 1404 aaPredicted RBP10.24□□□□□ -0.77
CHD8-213ENST00000557364 GOLGA6L1Q8N7Z2 621 aa10.24□□□□□ -0.77
CHD8-213ENST00000557364 IFIT2P09913 472 aaKnown RBP10.24□□□□□ -0.77
CHD8-213ENST00000557364 GAS2L2Q8NHY3 880 aa10.24□□□□□ -0.77
CHD8-213ENST00000557364 ST20-MTHFSA0A0A6YYL1 179 aa10.24□□□□□ -0.77
CHD8-213ENST00000557364 ANKRD50Q9ULJ7 1429 aa10.24□□□□□ -0.77
CHD8-213ENST00000557364 EHBP1L1Q8N3D4 1523 aa10.23□□□□□ -0.77
CHD8-213ENST00000557364 KIF6Q6ZMV9 814 aa10.23□□□□□ -0.77
CHD8-213ENST00000557364 ANKLE2Q86XL3 938 aa10.23□□□□□ -0.77
CHD8-213ENST00000557364 PROSER2Q86WR7 435 aaPredicted RBP10.23□□□□□ -0.77
CHD8-213ENST00000557364 FGD6Q6ZV73 1430 aa10.23□□□□□ -0.77
CHD8-213ENST00000557364 PLEKHO1Q53GL0 409 aaPredicted RBP10.23□□□□□ -0.77
CHD8-213ENST00000557364 LAMC3Q9Y6N6 1575 aa10.22□□□□□ -0.77
CHD8-213ENST00000557364 IGF1RP08069 1367 aa10.22□□□□□ -0.77
CHD8-213ENST00000557364 SLC3A2P08195 630 aaKnown RBP10.22□□□□□ -0.77
CHD8-213ENST00000557364 ZNF692Q9BU19 519 aaPredicted RBP10.22□□□□□ -0.77
CHD8-213ENST00000557364 CCDC70Q6NSX1 233 aa10.22□□□□□ -0.77
CHD8-213ENST00000557364 SUPT6HQ7KZ85 1726 aaKnown RBP10.22□□□□□ -0.77
CHD8-213ENST00000557364 A0A0U1RQG5 324 aaPredicted RBP10.22□□□□□ -0.77
CHD8-213ENST00000557364 NLRP2Q9NX02 1062 aa10.22□□□□□ -0.77
CHD8-213ENST00000557364 CFTRP13569 1480 aa10.21□□□□□ -0.77
CHD8-213ENST00000557364 CENPQQ7L2Z9 268 aaPredicted RBP10.21□□□□□ -0.77
CHD8-213ENST00000557364 TXNDC2Q86VQ3 553 aa10.21□□□□□ -0.77
CHD8-213ENST00000557364 DMRT2Q9Y5R5 561 aa10.21□□□□□ -0.77
CHD8-213ENST00000557364 CPLX1O14810 134 aa10.21□□□□□ -0.78
CHD8-213ENST00000557364 XBP1P17861 261 aa10.21□□□□□ -0.78
CHD8-213ENST00000557364 RAD54L2Q9Y4B4 1467 aa10.21□□□□□ -0.78
CHD8-213ENST00000557364 CNKSR2Q8WXI2 1034 aa10.21□□□□□ -0.78
CHD8-213ENST00000557364 BRMS1Q9HCU9 246 aa10.21□□□□□ -0.78
CHD8-213ENST00000557364 RPGRIP1LQ68CZ1 1315 aa10.21□□□□□ -0.78
CHD8-213ENST00000557364 DNMBPQ6XZF7 1577 aa10.21□□□□□ -0.78
CHD8-213ENST00000557364 R3HCC1Q9Y3T6 440 aaKnown RBP10.21□□□□□ -0.78
CHD8-213ENST00000557364 SAFBQ15424 915 aaKnown RBP eCLIP10.2□□□□□ -0.78
CHD8-213ENST00000557364 IPO7O95373 1038 aaKnown RBP10.2□□□□□ -0.78
CHD8-213ENST00000557364 PNISRQ8TF01 805 aaKnown RBP10.2□□□□□ -0.78
CHD8-213ENST00000557364 RUNDC1Q96C34 613 aa10.2□□□□□ -0.78
CHD8-213ENST00000557364 NAP1L5Q96NT1 182 aaPredicted RBP10.2□□□□□ -0.78
CHD8-213ENST00000557364 GNL3LQ9NVN8 582 aaKnown RBP10.2□□□□□ -0.78
CHD8-213ENST00000557364 AQRO60306 1485 aaKnown RBP eCLIP10.2□□□□□ -0.786e-7■■■■■ 28.2
CHD8-213ENST00000557364 DAPK1P53355 1430 aa10.2□□□□□ -0.78
CHD8-213ENST00000557364 SENP3-EIF4A1A0A087X0R7 540 aa10.2□□□□□ -0.78
CHD8-213ENST00000557364 APPP05067 770 aa10.2□□□□□ -0.78
CHD8-213ENST00000557364 WWC2Q6AWC2 1192 aa10.2□□□□□ -0.78
CHD8-213ENST00000557364 DDX11L8A8MPP1 907 aa10.19□□□□□ -0.78
CHD8-213ENST00000557364 CUL7Q14999 1698 aa10.19□□□□□ -0.78
CHD8-213ENST00000557364 NINLQ9Y2I6 1382 aa10.19□□□□□ -0.78
CHD8-213ENST00000557364 DHX16O60231 1041 aaKnown RBP10.19□□□□□ -0.78
CHD8-213ENST00000557364 TATP17735 454 aaPredicted RBP10.19□□□□□ -0.78
CHD8-213ENST00000557364 EIF2S2P20042 333 aaKnown RBP10.19□□□□□ -0.78
CHD8-213ENST00000557364 NLRP6P59044 892 aa10.19□□□□□ -0.78
CHD8-213ENST00000557364 RIC3Q7Z5B4 369 aa10.19□□□□□ -0.78
CHD8-213ENST00000557364 CCDC146Q8IYE0 955 aa10.19□□□□□ -0.78
CHD8-213ENST00000557364 CCDC7Q96M83 1385 aa10.19□□□□□ -0.78
CHD8-213ENST00000557364 SART3Q15020 963 aaKnown RBP10.18□□□□□ -0.78
CHD8-213ENST00000557364 CCAR1Q8IX12 1150 aaKnown RBP10.18□□□□□ -0.78
CHD8-213ENST00000557364 TSPYL4Q9UJ04 414 aa10.18□□□□□ -0.78
CHD8-213ENST00000557364 TBC1D2BQ9UPU7 963 aa10.18□□□□□ -0.78
CHD8-213ENST00000557364 FKBP5Q13451 457 aaPredicted RBP10.18□□□□□ -0.78
CHD8-213ENST00000557364 FBXW7Q969H0 707 aa10.18□□□□□ -0.78
CHD8-213ENST00000557364 HIP1O00291 1037 aa10.18□□□□□ -0.78
CHD8-213ENST00000557364 ABTB2Q8N961 1025 aa10.18□□□□□ -0.78
CHD8-213ENST00000557364 RILPL2Q969X0 211 aa10.18□□□□□ -0.78
CHD8-213ENST00000557364 GOLGA6L19H0YKK7 550 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms