RNA–Protein interactions for RNA: ENST00000557193.1

NEMF-214, Transcript of nuclear export mediator factor, humanhuman

TSL 1 (best)

Gene NEMF, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-214ENST00000557193 VPS9D1Q9Y2B5 631 aa11.62□□□□□ -0.55
NEMF-214ENST00000557193 SMARCA2P51531 1590 aa11.62□□□□□ -0.55
NEMF-214ENST00000557193 TK2O00142 265 aa11.61□□□□□ -0.55
NEMF-214ENST00000557193 NLRP7Q8WX94 980 aa11.61□□□□□ -0.55
NEMF-214ENST00000557193 FAM117AQ9C073 453 aa11.61□□□□□ -0.55
NEMF-214ENST00000557193 C3orf80F5H4A9 247 aa11.6□□□□□ -0.55
NEMF-214ENST00000557193 SMAPO00193 183 aa11.6□□□□□ -0.55
NEMF-214ENST00000557193 SSTR3P32745 418 aaPredicted RBP11.6□□□□□ -0.55
NEMF-214ENST00000557193 FAM217BQ9NTX9 383 aaPredicted RBP11.59□□□□□ -0.55
NEMF-214ENST00000557193 MS4A1P11836 297 aa11.58□□□□□ -0.56
NEMF-214ENST00000557193 HDGFP51858 240 aaKnown RBP11.58□□□□□ -0.56
NEMF-214ENST00000557193 NBPF3Q9H094 633 aa11.58□□□□□ -0.56
NEMF-214ENST00000557193 EIF4G1Q04637 1599 aaKnown RBP11.58□□□□□ -0.56
NEMF-214ENST00000557193 LSM11P83369 360 aaKnown RBP eCLIP11.57□□□□□ -0.56
NEMF-214ENST00000557193 SULF1Q8IWU6 871 aa11.57□□□□□ -0.56
NEMF-214ENST00000557193 TMEM134Q9H6X4 195 aa11.57□□□□□ -0.56
NEMF-214ENST00000557193 LAPTM4BQ86VI4 370 aa11.56□□□□□ -0.56
NEMF-214ENST00000557193 FAM98CQ17RN3 349 aaKnown RBP11.55□□□□□ -0.56
NEMF-214ENST00000557193 SEPT9Q9UHD8 586 aaPredicted RBP11.55□□□□□ -0.56
NEMF-214ENST00000557193 WIZO95785 1651 aa11.55□□□□□ -0.56
NEMF-214ENST00000557193 SLC4A3P48751 1232 aa11.54□□□□□ -0.56
NEMF-214ENST00000557193 RSPH4AQ5TD94 716 aa11.54□□□□□ -0.56
NEMF-214ENST00000557193 ADGRD1Q6QNK2 874 aa11.54□□□□□ -0.56
NEMF-214ENST00000557193 PEG3Q9GZU2 1588 aa11.54□□□□□ -0.56
NEMF-214ENST00000557193 BAZ1BQ9UIG0 1483 aaKnown RBP11.53□□□□□ -0.56
NEMF-214ENST00000557193 PLEKHG3A1L390 1219 aa11.53□□□□□ -0.56
NEMF-214ENST00000557193 STAC3Q96MF2 364 aa11.53□□□□□ -0.56
NEMF-214ENST00000557193 BEGAINQ9BUH8 593 aa11.53□□□□□ -0.56
NEMF-214ENST00000557193 TOP2AP11388 1531 aaKnown RBP11.53□□□□□ -0.56
NEMF-214ENST00000557193 ATAD2BQ9ULI0 1458 aa11.52□□□□□ -0.56
NEMF-214ENST00000557193 BHMG1C9JSJ3 638 aaPredicted RBP11.52□□□□□ -0.57
NEMF-214ENST00000557193 ANKRD13DQ6ZTN6 518 aa11.52□□□□□ -0.57
NEMF-214ENST00000557193 MRPL50Q8N5N7 158 aaKnown RBP11.52□□□□□ -0.57
NEMF-214ENST00000557193 DDX11L8A8MPP1 907 aa11.51□□□□□ -0.57
NEMF-214ENST00000557193 RSPH6AQ9H0K4 717 aa11.5□□□□□ -0.57
NEMF-214ENST00000557193 GTF3C3Q9Y5Q9 886 aa11.5□□□□□ -0.57
NEMF-214ENST00000557193 DIXDC1Q155Q3 683 aa11.48□□□□□ -0.57
NEMF-214ENST00000557193 SWT1Q5T5J6 900 aaKnown RBP11.48□□□□□ -0.57
NEMF-214ENST00000557193 GOPCQ9HD26 462 aa11.48□□□□□ -0.57
NEMF-214ENST00000557193 CD46P15529 392 aa11.47□□□□□ -0.57
NEMF-214ENST00000557193 RDH13Q8NBN7 331 aa11.47□□□□□ -0.57
NEMF-214ENST00000557193 NCAPD3P42695 1498 aa11.46□□□□□ -0.57
NEMF-214ENST00000557193 GOLGA8CPA6NN73 597 aa11.46□□□□□ -0.57
NEMF-214ENST00000557193 HRO43593 1189 aa11.46□□□□□ -0.57
NEMF-214ENST00000557193 SLF2Q8IX21 1173 aa11.46□□□□□ -0.57
NEMF-214ENST00000557193 ZFRQ96KR1 1074 aaKnown RBP11.46□□□□□ -0.57
NEMF-214ENST00000557193 HMGXB3Q12766 1538 aa11.45□□□□□ -0.58
NEMF-214ENST00000557193 SAMD7Q7Z3H4 446 aa11.45□□□□□ -0.58
NEMF-214ENST00000557193 SH3D19Q5HYK7 790 aa11.44□□□□□ -0.58
NEMF-214ENST00000557193 NUTM1Q86Y26 1132 aa11.44□□□□□ -0.58
NEMF-214ENST00000557193 CC2D2AQ9P2K1 1620 aa11.42□□□□□ -0.58
NEMF-214ENST00000557193 POTEGQ6S5H5 508 aa11.42□□□□□ -0.58
NEMF-214ENST00000557193 NECTIN2Q92692 538 aa11.42□□□□□ -0.58
NEMF-214ENST00000557193 PCMTD1Q96MG8 357 aaPredicted RBP11.42□□□□□ -0.58
NEMF-214ENST00000557193 TBC1D2Q9BYX2 928 aa11.42□□□□□ -0.58
NEMF-214ENST00000557193 SKIV2LQ15477 1246 aaKnown RBP11.41□□□□□ -0.58
NEMF-214ENST00000557193 LRCH3Q96II8 777 aa11.41□□□□□ -0.58
NEMF-214ENST00000557193 ATP1B4Q9UN42 357 aaPredicted RBP11.41□□□□□ -0.58
NEMF-214ENST00000557193 POTEMA6NI47 508 aa11.4□□□□□ -0.58
NEMF-214ENST00000557193 RNF40O75150 1001 aa11.4□□□□□ -0.58
NEMF-214ENST00000557193 ANKK1Q8NFD2 765 aa11.4□□□□□ -0.58
NEMF-214ENST00000557193 KRTAP3-3Q9BYR6 98 aa11.4□□□□□ -0.58
NEMF-214ENST00000557193 KRTAP3-2Q9BYR7 98 aa11.4□□□□□ -0.58
NEMF-214ENST00000557193 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.4□□□□□ -0.58
NEMF-214ENST00000557193 GCGRP47871 477 aa11.39□□□□□ -0.59
NEMF-214ENST00000557193 SPIRE2Q8WWL2 714 aa11.39□□□□□ -0.59
NEMF-214ENST00000557193 SLC10A3P09131 477 aa11.38□□□□□ -0.59
NEMF-214ENST00000557193 MYSM1Q5VVJ2 828 aa11.38□□□□□ -0.59
NEMF-214ENST00000557193 CDAN1Q8IWY9 1227 aa11.38□□□□□ -0.59
NEMF-214ENST00000557193 KDM4AO75164 1064 aa11.37□□□□□ -0.59
NEMF-214ENST00000557193 USP46P62068 366 aa11.37□□□□□ -0.59
NEMF-214ENST00000557193 POLR3EQ9NVU0 708 aa11.37□□□□□ -0.59
NEMF-214ENST00000557193 CCDC88BA6NC98 1476 aa11.37□□□□□ -0.59
NEMF-214ENST00000557193 WNT2BQ93097 391 aa11.35□□□□□ -0.59
NEMF-214ENST00000557193 CLK2P49760 499 aaKnown RBP11.34□□□□□ -0.59
NEMF-214ENST00000557193 ERICH6Q7L0X2 663 aa11.34□□□□□ -0.59
NEMF-214ENST00000557193 SOWAHBA6NEL2 793 aa11.33□□□□□ -0.6
NEMF-214ENST00000557193 CFHP08603 1231 aa11.33□□□□□ -0.6
NEMF-214ENST00000557193 PPP4CP60510 307 aa11.33□□□□□ -0.6
NEMF-214ENST00000557193 KMT5BQ4FZB7 885 aa11.33□□□□□ -0.6
NEMF-214ENST00000557193 GRIPAP1Q4V328 841 aa11.33□□□□□ -0.6
NEMF-214ENST00000557193 RIC3Q7Z5B4 369 aa11.33□□□□□ -0.6
NEMF-214ENST00000557193 GJA5P36382 358 aa11.32□□□□□ -0.6
NEMF-214ENST00000557193 PRR14Q9BWN1 585 aa11.32□□□□□ -0.6
NEMF-214ENST00000557193 SPTLC1O15269 473 aa11.31□□□□□ -0.6
NEMF-214ENST00000557193 PROCA1Q8NCQ7 364 aaPredicted RBP11.31□□□□□ -0.6
NEMF-214ENST00000557193 TSR3Q9UJK0 312 aaKnown RBP11.31□□□□□ -0.6
NEMF-214ENST00000557193 MOXD2PA6NHM9 499 aa11.3□□□□□ -0.6
NEMF-214ENST00000557193 BCAMP50895 628 aa11.29□□□□□ -0.6
NEMF-214ENST00000557193 TUSC1Q2TAM9 212 aa11.29□□□□□ -0.6
NEMF-214ENST00000557193 RSBN1LQ6PCB5 846 aaPredicted RBP11.29□□□□□ -0.6
NEMF-214ENST00000557193 HPS5Q9UPZ3 1129 aa11.29□□□□□ -0.6
NEMF-214ENST00000557193 HOXA2O43364 376 aa11.28□□□□□ -0.6
NEMF-214ENST00000557193 NDUFV2P19404 249 aa11.28□□□□□ -0.6
NEMF-214ENST00000557193 ATP6V1AP38606 617 aa11.27□□□□□ -0.61
NEMF-214ENST00000557193 FUT2Q10981 343 aa11.27□□□□□ -0.61
NEMF-214ENST00000557193 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.27□□□□□ -0.61
NEMF-214ENST00000557193 LIMD1Q9UGP4 676 aa11.27□□□□□ -0.61
NEMF-214ENST00000557193 ACTN4O43707 911 aaKnown RBP11.26□□□□□ -0.61
NEMF-214ENST00000557193 FDX1P10109 184 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms