RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 SLF2Q8IX21 1173 aa10.24□□□□□ -0.77
ATXN3-246ENST00000557030 MAP2K5Q13163 448 aa10.23□□□□□ -0.77
ATXN3-246ENST00000557030 IRF6O14896 467 aa10.21□□□□□ -0.77
ATXN3-246ENST00000557030 ZMYND10O75800 440 aa10.2□□□□□ -0.78
ATXN3-246ENST00000557030 APLP1P51693 650 aa10.2□□□□□ -0.78
ATXN3-246ENST00000557030 MINK1Q8N4C8 1332 aaPredicted RBP10.2□□□□□ -0.78
ATXN3-246ENST00000557030 SLC10A3P09131 477 aa10.19□□□□□ -0.78
ATXN3-246ENST00000557030 ZC3H15Q8WU90 426 aaKnown RBP10.19□□□□□ -0.78
ATXN3-246ENST00000557030 NECTIN2Q92692 538 aa10.19□□□□□ -0.78
ATXN3-246ENST00000557030 TJAP1Q5JTD0 557 aa10.18□□□□□ -0.78
ATXN3-246ENST00000557030 BARGINQ6ZT62 677 aa10.17□□□□□ -0.78
ATXN3-246ENST00000557030 DAXXQ9UER7 740 aaPredicted RBP10.17□□□□□ -0.78
ATXN3-246ENST00000557030 RNF40O75150 1001 aa10.16□□□□□ -0.78
ATXN3-246ENST00000557030 NLRP7Q8WX94 980 aa10.15□□□□□ -0.78
ATXN3-246ENST00000557030 CCDC102AQ96A19 550 aa10.15□□□□□ -0.78
ATXN3-246ENST00000557030 SLC4A3P48751 1232 aa10.13□□□□□ -0.79
ATXN3-246ENST00000557030 KCNC4Q03721 635 aa10.12□□□□□ -0.79
ATXN3-246ENST00000557030 MTRQ99707 1265 aa10.12□□□□□ -0.79
ATXN3-246ENST00000557030 TMUB1Q9BVT8 246 aa10.12□□□□□ -0.79
ATXN3-246ENST00000557030 ACTN4O43707 911 aaKnown RBP10.11□□□□□ -0.79
ATXN3-246ENST00000557030 A0A0G2JS52 829 aa10.1□□□□□ -0.79
ATXN3-246ENST00000557030 PRR14Q9BWN1 585 aa10.1□□□□□ -0.79
ATXN3-246ENST00000557030 IL21Q9HBE4 155 aa10.1□□□□□ -0.79
ATXN3-246ENST00000557030 CFHP08603 1231 aa10.09□□□□□ -0.79
ATXN3-246ENST00000557030 BCANQ96GW7 911 aa10.09□□□□□ -0.79
ATXN3-246ENST00000557030 ZNF516Q92618 1163 aa10.08□□□□□ -0.8
ATXN3-246ENST00000557030 KMT5BQ4FZB7 885 aa10.06□□□□□ -0.8
ATXN3-246ENST00000557030 CD46P15529 392 aa10.05□□□□□ -0.8
ATXN3-246ENST00000557030 GCGRP47871 477 aa10.05□□□□□ -0.8
ATXN3-246ENST00000557030 SULF1Q8IWU6 871 aa10.05□□□□□ -0.8
ATXN3-246ENST00000557030 REPIN1Q9BWE0 567 aaKnown RBP10.05□□□□□ -0.8
ATXN3-246ENST00000557030 PCDHB3Q9Y5E6 796 aa10.05□□□□□ -0.8
ATXN3-246ENST00000557030 DDX11L8A8MPP1 907 aa10.04□□□□□ -0.8
ATXN3-246ENST00000557030 MDM2Q00987 491 aaPredicted RBP10.04□□□□□ -0.8
ATXN3-246ENST00000557030 AMHR2Q16671 573 aa10.04□□□□□ -0.8
ATXN3-246ENST00000557030 BLOC1S3Q6QNY0 202 aa10.04□□□□□ -0.8
ATXN3-246ENST00000557030 ZPR1O75312 459 aa10.03□□□□□ -0.8
ATXN3-246ENST00000557030 COPS2P61201 443 aa10.03□□□□□ -0.8
ATXN3-246ENST00000557030 RSPH4AQ5TD94 716 aa10.03□□□□□ -0.8
ATXN3-246ENST00000557030 KRI1Q8N9T8 703 aaKnown RBP10.02□□□□□ -0.81
ATXN3-246ENST00000557030 GPCPD1Q9NPB8 672 aa10.02□□□□□ -0.81
ATXN3-246ENST00000557030 FAM217BQ9NTX9 383 aaPredicted RBP10.02□□□□□ -0.81
ATXN3-246ENST00000557030 RGS20O76081 388 aa10.01□□□□□ -0.81
ATXN3-246ENST00000557030 CLCN1P35523 988 aa10.01□□□□□ -0.81
ATXN3-246ENST00000557030 RDH13Q8NBN7 331 aa10.01□□□□□ -0.81
ATXN3-246ENST00000557030 NKX2-3Q8TAU0 364 aa10.01□□□□□ -0.81
ATXN3-246ENST00000557030 TRIM66O15016 1216 aa9.99□□□□□ -0.81
ATXN3-246ENST00000557030 FUT2Q10981 343 aa9.99□□□□□ -0.81
ATXN3-246ENST00000557030 MORN1Q5T089 497 aa9.98□□□□□ -0.81
ATXN3-246ENST00000557030 AK7Q96M32 723 aa9.98□□□□□ -0.81
ATXN3-246ENST00000557030 SCUBE3Q8IX30 993 aa9.97□□□□□ -0.81
ATXN3-246ENST00000557030 ATP6V1AP38606 617 aa9.96□□□□□ -0.82
ATXN3-246ENST00000557030 PUS10Q3MIT2 529 aaKnown RBP9.96□□□□□ -0.82
ATXN3-246ENST00000557030 PPP1R18Q6NYC8 613 aa9.96□□□□□ -0.82
ATXN3-246ENST00000557030 NR1I2O75469 434 aa9.95□□□□□ -0.82
ATXN3-246ENST00000557030 THAP11Q96EK4 314 aa9.95□□□□□ -0.82
ATXN3-246ENST00000557030 TLL1O43897 1013 aa9.94□□□□□ -0.82
ATXN3-246ENST00000557030 SLC24A3Q9HC58 644 aa9.94□□□□□ -0.82
ATXN3-246ENST00000557030 SSTR3P32745 418 aaPredicted RBP9.93□□□□□ -0.82
ATXN3-246ENST00000557030 PARP9Q8IXQ6 854 aa9.93□□□□□ -0.82
ATXN3-246ENST00000557030 SALL2Q9Y467 1007 aaPredicted RBP9.93□□□□□ -0.82
ATXN3-246ENST00000557030 KDM4AO75164 1064 aa9.92□□□□□ -0.82
ATXN3-246ENST00000557030 GIGYF2Q6Y7W6 1299 aaKnown RBP9.92□□□□□ -0.82
ATXN3-246ENST00000557030 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.92□□□□□ -0.82
ATXN3-246ENST00000557030 SLC27A5Q9Y2P5 690 aa9.92□□□□□ -0.82
ATXN3-246ENST00000557030 ADH1BP00325 375 aa9.91□□□□□ -0.82
ATXN3-246ENST00000557030 USP46P62068 366 aa9.9□□□□□ -0.82
ATXN3-246ENST00000557030 TTLL12Q14166 644 aaPredicted RBP9.89□□□□□ -0.83
ATXN3-246ENST00000557030 BRICD5Q6PL45 260 aa9.89□□□□□ -0.83
ATXN3-246ENST00000557030 HOXA2O43364 376 aa9.88□□□□□ -0.83
ATXN3-246ENST00000557030 PDE4DQ08499 809 aa9.88□□□□□ -0.83
ATXN3-246ENST00000557030 RNF223E7ERA6 249 aa9.87□□□□□ -0.83
ATXN3-246ENST00000557030 MS4A1P11836 297 aa9.87□□□□□ -0.83
ATXN3-246ENST00000557030 GRIPAP1Q4V328 841 aa9.87□□□□□ -0.83
ATXN3-246ENST00000557030 SPSB2Q99619 263 aa9.87□□□□□ -0.83
ATXN3-246ENST00000557030 RNF19BQ6ZMZ0 732 aa9.86□□□□□ -0.83
ATXN3-246ENST00000557030 FAM160A2Q8N612 972 aaPredicted RBP9.86□□□□□ -0.83
ATXN3-246ENST00000557030 HLA-CQ95604 372 aa9.86□□□□□ -0.83
ATXN3-246ENST00000557030 S1PR4O95977 384 aa9.85□□□□□ -0.83
ATXN3-246ENST00000557030 GGCXP38435 758 aa9.85□□□□□ -0.83
ATXN3-246ENST00000557030 EMID1Q96A84 441 aaPredicted RBP9.85□□□□□ -0.83
ATXN3-246ENST00000557030 FMNL1O95466 1100 aaPredicted RBP9.84□□□□□ -0.83
ATXN3-246ENST00000557030 ANKLE1Q8NAG6 615 aa9.84□□□□□ -0.83
ATXN3-246ENST00000557030 SPIRE2Q8WWL2 714 aa9.84□□□□□ -0.83
ATXN3-246ENST00000557030 SLC6A16Q9GZN6 736 aa9.84□□□□□ -0.83
ATXN3-246ENST00000557030 V9GY48 417 aaPredicted RBP9.83□□□□□ -0.84
ATXN3-246ENST00000557030 MSS51Q4VC12 460 aa9.82□□□□□ -0.84
ATXN3-246ENST00000557030 BEGAINQ9BUH8 593 aa9.82□□□□□ -0.84
ATXN3-246ENST00000557030 PPEF1O14829 653 aaPredicted RBP9.81□□□□□ -0.84
ATXN3-246ENST00000557030 GUCA2AQ02747 115 aa9.81□□□□□ -0.84
ATXN3-246ENST00000557030 Q3C1V9 767 aa9.81□□□□□ -0.84
ATXN3-246ENST00000557030 NUTM1Q86Y26 1132 aa9.8□□□□□ -0.84
ATXN3-246ENST00000557030 PRKD2Q9BZL6 878 aa9.8□□□□□ -0.84
ATXN3-246ENST00000557030 PCDHGC3Q9UN70 934 aa9.8□□□□□ -0.84
ATXN3-246ENST00000557030 MOXD2PA6NHM9 499 aa9.78□□□□□ -0.84
ATXN3-246ENST00000557030 GJA5P36382 358 aa9.78□□□□□ -0.84
ATXN3-246ENST00000557030 MMP16P51512 607 aa9.78□□□□□ -0.84
ATXN3-246ENST00000557030 PLA2G2CQ5R387 149 aa9.78□□□□□ -0.84
ATXN3-246ENST00000557030 PRDM9Q9NQV7 894 aa9.78□□□□□ -0.84
ATXN3-246ENST00000557030 USB1Q9BQ65 265 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms