RNA–Protein interactions for RNA: ENST00000556890.1

AL390334.1-204, humanhuman

TSL 1 (best)

Gene AL390334.1, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390334.1-204ENST00000556890 ZCCHC11Q5TAX3 1644 aaKnown RBP11.28□□□□□ -0.6
AL390334.1-204ENST00000556890 CAMK2BQ13554 666 aa11.28□□□□□ -0.6
AL390334.1-204ENST00000556890 FBXW7Q969H0 707 aa11.28□□□□□ -0.6
AL390334.1-204ENST00000556890 NBPF3Q9H094 633 aa11.27□□□□□ -0.61
AL390334.1-204ENST00000556890 PCDHGA10Q9Y5H3 936 aa11.27□□□□□ -0.61
AL390334.1-204ENST00000556890 UHRF1BP1LA0JNW5 1464 aa11.26□□□□□ -0.61
AL390334.1-204ENST00000556890 GOLGA8CPA6NN73 597 aa11.26□□□□□ -0.61
AL390334.1-204ENST00000556890 PHF14O94880 888 aa11.26□□□□□ -0.61
AL390334.1-204ENST00000556890 MRPL50Q8N5N7 158 aaKnown RBP11.26□□□□□ -0.61
AL390334.1-204ENST00000556890 PPRC1Q5VV67 1664 aaKnown RBP11.26□□□□□ -0.61
AL390334.1-204ENST00000556890 UACAQ9BZF9 1416 aa11.26□□□□□ -0.61
AL390334.1-204ENST00000556890 PPP1R3GB7ZBB8 358 aa11.25□□□□□ -0.61
AL390334.1-204ENST00000556890 TYW1BQ6NUM6 668 aa11.25□□□□□ -0.61
AL390334.1-204ENST00000556890 PLB1Q6P1J6 1458 aa11.25□□□□□ -0.61
AL390334.1-204ENST00000556890 ASXL2Q76L83 1435 aa11.24□□□□□ -0.61
AL390334.1-204ENST00000556890 GOLGA3Q08378 1498 aa11.24□□□□□ -0.61
AL390334.1-204ENST00000556890 GLI2P10070 1586 aa11.24□□□□□ -0.61
AL390334.1-204ENST00000556890 PTPN5P54829 565 aa11.23□□□□□ -0.61
AL390334.1-204ENST00000556890 THSD4Q6ZMP0 1018 aa11.23□□□□□ -0.61
AL390334.1-204ENST00000556890 MAP3K4Q9Y6R4 1608 aa11.23□□□□□ -0.61
AL390334.1-204ENST00000556890 WNT2BQ93097 391 aa11.22□□□□□ -0.61
AL390334.1-204ENST00000556890 EPAS1Q99814 870 aa11.22□□□□□ -0.61
AL390334.1-204ENST00000556890 KDM5BQ9UGL1 1544 aa11.21□□□□□ -0.61
AL390334.1-204ENST00000556890 RABGEF1Q9UJ41 708 aa11.21□□□□□ -0.61
AL390334.1-204ENST00000556890 PRXQ9BXM0 1461 aa11.2□□□□□ -0.62
AL390334.1-204ENST00000556890 CFAP43Q8NDM7 1665 aa11.18□□□□□ -0.62
AL390334.1-204ENST00000556890 IFFO2Q5TF58 517 aa11.18□□□□□ -0.62
AL390334.1-204ENST00000556890 ABCA8O94911 1581 aa11.18□□□□□ -0.62
AL390334.1-204ENST00000556890 EPRSP07814 1512 aaKnown RBP11.18□□□□□ -0.62
AL390334.1-204ENST00000556890 DPYSL4O14531 572 aa11.17□□□□□ -0.62
AL390334.1-204ENST00000556890 ONECUT3O60422 494 aaPredicted RBP11.17□□□□□ -0.62
AL390334.1-204ENST00000556890 SPRYD3Q8NCJ5 442 aa11.17□□□□□ -0.62
AL390334.1-204ENST00000556890 COL9A1P20849 921 aa11.16□□□□□ -0.62
AL390334.1-204ENST00000556890 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.16□□□□□ -0.62
AL390334.1-204ENST00000556890 WDR7Q9Y4E6 1490 aa11.16□□□□□ -0.62
AL390334.1-204ENST00000556890 TEX14Q8IWB6 1497 aa11.15□□□□□ -0.62
AL390334.1-204ENST00000556890 AMER1Q5JTC6 1135 aaPredicted RBP11.15□□□□□ -0.62
AL390334.1-204ENST00000556890 LAPTM4BQ86VI4 370 aa11.15□□□□□ -0.62
AL390334.1-204ENST00000556890 FAM9AQ8IZU1 332 aaPredicted RBP11.15□□□□□ -0.62
AL390334.1-204ENST00000556890 SAMD9Q5K651 1589 aa11.15□□□□□ -0.62
AL390334.1-204ENST00000556890 PROX2Q3B8N5 592 aa11.14□□□□□ -0.63
AL390334.1-204ENST00000556890 C6orf132Q5T0Z8 1188 aa11.14□□□□□ -0.63
AL390334.1-204ENST00000556890 ANKK1Q8NFD2 765 aa11.13□□□□□ -0.63
AL390334.1-204ENST00000556890 RAPGEF6Q8TEU7 1601 aa11.13□□□□□ -0.63
AL390334.1-204ENST00000556890 EEA1Q15075 1411 aa11.12□□□□□ -0.63
AL390334.1-204ENST00000556890 SPDYE16A6NNV3 312 aaPredicted RBP11.1□□□□□ -0.63
AL390334.1-204ENST00000556890 RGS20O76081 388 aa11.1□□□□□ -0.63
AL390334.1-204ENST00000556890 P3H3Q8IVL6 736 aa11.1□□□□□ -0.63
AL390334.1-204ENST00000556890 KIAA1468Q9P260 1216 aa11.1□□□□□ -0.63
AL390334.1-204ENST00000556890 KIF21BO75037 1637 aa11.09□□□□□ -0.63
AL390334.1-204ENST00000556890 PDIA6Q15084 440 aa11.09□□□□□ -0.63
AL390334.1-204ENST00000556890 DDX12PQ92771 950 aa11.08□□□□□ -0.64
AL390334.1-204ENST00000556890 TRIM6-TRIM34B2RNG4 842 aa11.07□□□□□ -0.64
AL390334.1-204ENST00000556890 CD109Q6YHK3 1445 aa11.07□□□□□ -0.64
AL390334.1-204ENST00000556890 SOWAHBA6NEL2 793 aa11.06□□□□□ -0.64
AL390334.1-204ENST00000556890 ARID3CA6NKF2 412 aa11.06□□□□□ -0.64
AL390334.1-204ENST00000556890 RANGAP1P46060 587 aaPredicted RBP11.06□□□□□ -0.64
AL390334.1-204ENST00000556890 NYAP1Q6ZVC0 841 aa11.06□□□□□ -0.64
AL390334.1-204ENST00000556890 RBM33Q96EV2 1170 aaKnown RBP11.06□□□□□ -0.64
AL390334.1-204ENST00000556890 ZFRQ96KR1 1074 aaKnown RBP11.06□□□□□ -0.64
AL390334.1-204ENST00000556890 ABCA9Q8IUA7 1624 aa11.06□□□□□ -0.64
AL390334.1-204ENST00000556890 MAGI3Q5TCQ9 1506 aa11.05□□□□□ -0.64
AL390334.1-204ENST00000556890 EN1Q05925 392 aaPredicted RBP11.05□□□□□ -0.64
AL390334.1-204ENST00000556890 ARIH1Q9Y4X5 557 aaPredicted RBP11.05□□□□□ -0.64
AL390334.1-204ENST00000556890 COL17A1Q9UMD9 1497 aaPredicted RBP11.05□□□□□ -0.64
AL390334.1-204ENST00000556890 E2F4Q16254 413 aa11.04□□□□□ -0.64
AL390334.1-204ENST00000556890 ATP10BO94823 1461 aa11.04□□□□□ -0.64
AL390334.1-204ENST00000556890 ADGRL1O94910 1474 aa11.04□□□□□ -0.64
AL390334.1-204ENST00000556890 EFCAB5A4FU69 1503 aa11.04□□□□□ -0.64
AL390334.1-204ENST00000556890 NBR1Q14596 966 aa11.03□□□□□ -0.64
AL390334.1-204ENST00000556890 WDR70Q9NW82 654 aa11.03□□□□□ -0.64
AL390334.1-204ENST00000556890 FHOD3Q2V2M9 1422 aa11.02□□□□□ -0.64
AL390334.1-204ENST00000556890 A0A0G2JS52 829 aa11.02□□□□□ -0.65
AL390334.1-204ENST00000556890 FAM98CQ17RN3 349 aaKnown RBP11.02□□□□□ -0.65
AL390334.1-204ENST00000556890 MAP3K7O43318 606 aa11.01□□□□□ -0.65
AL390334.1-204ENST00000556890 ITGBL1O95965 494 aaPredicted RBP11.01□□□□□ -0.65
AL390334.1-204ENST00000556890 BCAMP50895 628 aa11.01□□□□□ -0.65
AL390334.1-204ENST00000556890 PACS2Q86VP3 889 aa11.01□□□□□ -0.65
AL390334.1-204ENST00000556890 PAXIP1Q6ZW49 1069 aaPredicted RBP11□□□□□ -0.65
AL390334.1-204ENST00000556890 SEPT9Q9UHD8 586 aaPredicted RBP11□□□□□ -0.65
AL390334.1-204ENST00000556890 NUP153P49790 1475 aaKnown RBP11□□□□□ -0.65
AL390334.1-204ENST00000556890 CFAP44Q96MT7 982 aa10.99□□□□□ -0.65
AL390334.1-204ENST00000556890 CFAP74Q9C0B2 1584 aa10.99□□□□□ -0.65
AL390334.1-204ENST00000556890 CERKQ8TCT0 537 aa10.98□□□□□ -0.65
AL390334.1-204ENST00000556890 RTN4Q9NQC3 1192 aaKnown RBP10.98□□□□□ -0.65
AL390334.1-204ENST00000556890 TSR1Q2NL82 804 aaKnown RBP10.97□□□□□ -0.65
AL390334.1-204ENST00000556890 ARAP3Q8WWN8 1544 aa10.97□□□□□ -0.65
AL390334.1-204ENST00000556890 HECW1Q76N89 1606 aa10.96□□□□□ -0.65
AL390334.1-204ENST00000556890 UBTFP17480 764 aaKnown RBP10.96□□□□□ -0.65
AL390334.1-204ENST00000556890 LRCH3Q96II8 777 aa10.96□□□□□ -0.65
AL390334.1-204ENST00000556890 WBP1LQ9NX94 342 aa10.96□□□□□ -0.65
AL390334.1-204ENST00000556890 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.96□□□□□ -0.65
AL390334.1-204ENST00000556890 TSKSQ9UJT2 592 aa10.96□□□□□ -0.65
AL390334.1-204ENST00000556890 MYO5CQ9NQX4 1742 aa10.95□□□□□ -0.66
AL390334.1-204ENST00000556890 TSR3Q9UJK0 312 aaKnown RBP10.95□□□□□ -0.66
AL390334.1-204ENST00000556890 RICTORQ6R327 1708 aa10.95□□□□□ -0.66
AL390334.1-204ENST00000556890 NEO1Q92859 1461 aa10.94□□□□□ -0.66
AL390334.1-204ENST00000556890 LRRIQ1Q96JM4 1722 aa10.94□□□□□ -0.66
AL390334.1-204ENST00000556890 TTC37Q6PGP7 1564 aa10.94□□□□□ -0.66
AL390334.1-204ENST00000556890 PHLDB1Q86UU1 1377 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms