RNA–Protein interactions for RNA: ENST00000556876.1

CHGA-206, Transcript of chromogranin A, humanhuman

TSL 2

Gene CHGA, Length 912 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-206ENST00000556876 TET3O43151 1660 aa26.21■■□□□ 1.79
CHGA-206ENST00000556876 PLEKHG1Q9ULL1 1385 aa26.2■■□□□ 1.79
CHGA-206ENST00000556876 TBX22Q9Y458 520 aa26.19■■□□□ 1.78
CHGA-206ENST00000556876 NKTRP30414 1462 aaKnown RBP26.18■■□□□ 1.78
CHGA-206ENST00000556876 RIMS2Q9UQ26 1411 aa26.16■■□□□ 1.78
CHGA-206ENST00000556876 ZFYVE9O95405 1425 aa26.15■■□□□ 1.78
CHGA-206ENST00000556876 CHGAP10645 457 aaKnown RBP26.15■■□□□ 1.78
CHGA-206ENST00000556876 NUP155O75694 1391 aa26.15■■□□□ 1.78
CHGA-206ENST00000556876 MSH6P52701 1360 aa26.15■■□□□ 1.78
CHGA-206ENST00000556876 SENP3Q9H4L4 574 aaPredicted RBP26.13■■□□□ 1.77
CHGA-206ENST00000556876 NCOA3Q9Y6Q9 1424 aa26.13■■□□□ 1.77
CHGA-206ENST00000556876 UNC13BO14795 1591 aa26.12■■□□□ 1.77
CHGA-206ENST00000556876 PIK3R4Q99570 1358 aa26.1■■□□□ 1.77
CHGA-206ENST00000556876 ITGAEP38570 1179 aa26.1■■□□□ 1.77
CHGA-206ENST00000556876 SLAIN2Q9P270 581 aa26.09■■□□□ 1.77
CHGA-206ENST00000556876 GCC2Q8IWJ2 1684 aa26.07■■□□□ 1.76
CHGA-206ENST00000556876 NWD1Q149M9 1564 aa26.07■■□□□ 1.76
CHGA-206ENST00000556876 TMEM131LA2VDJ0 1609 aa26.06■■□□□ 1.76
CHGA-206ENST00000556876 IQGAP3Q86VI3 1631 aa26.03■■□□□ 1.76
CHGA-206ENST00000556876 RBM33Q96EV2 1170 aaKnown RBP26.03■■□□□ 1.76
CHGA-206ENST00000556876 C14orf37Q86TY3 774 aa26.02■■□□□ 1.76
CHGA-206ENST00000556876 CADPS2Q86UW7 1296 aa26.02■■□□□ 1.76
CHGA-206ENST00000556876 C19orf44Q9H6X5 657 aa26.02■■□□□ 1.76
CHGA-206ENST00000556876 XIRP1Q702N8 1843 aaKnown RBP26■■□□□ 1.75
CHGA-206ENST00000556876 DIP2AQ14689 1571 aa25.99■■□□□ 1.75
CHGA-206ENST00000556876 ATF3P18847 181 aa25.98■■□□□ 1.75
CHGA-206ENST00000556876 ADAMTS13Q76LX8 1427 aa25.97■■□□□ 1.75
CHGA-206ENST00000556876 E9PCH4 1651 aa25.96■■□□□ 1.75
CHGA-206ENST00000556876 NUTM2DQ5VT03 806 aaPredicted RBP25.96■■□□□ 1.75
CHGA-206ENST00000556876 AMOTL2Q9Y2J4 779 aa25.95■■□□□ 1.74
CHGA-206ENST00000556876 ZNF326Q5BKZ1 582 aaKnown RBP25.94■■□□□ 1.74
CHGA-206ENST00000556876 PPARGC1BQ86YN6 1023 aaKnown RBP25.94■■□□□ 1.74
CHGA-206ENST00000556876 JCADQ9P266 1359 aa25.94■■□□□ 1.74
CHGA-206ENST00000556876 CHD2O14647 1828 aaKnown RBP25.93■■□□□ 1.74
CHGA-206ENST00000556876 RRBP1Q9P2E9 1410 aaKnown RBP25.91■■□□□ 1.74
CHGA-206ENST00000556876 ROBO1Q9Y6N7 1651 aa25.91■■□□□ 1.74
CHGA-206ENST00000556876 RGS17Q9UGC6 210 aaPredicted RBP25.91■■□□□ 1.74
CHGA-206ENST00000556876 TRPM2O94759 1503 aa25.9■■□□□ 1.74
CHGA-206ENST00000556876 MYO5BQ9ULV0 1848 aa25.86■■□□□ 1.73
CHGA-206ENST00000556876 SPATA31A6Q5VVP1 1343 aa25.86■■□□□ 1.73
CHGA-206ENST00000556876 DCCP43146 1447 aa25.85■■□□□ 1.73
CHGA-206ENST00000556876 NAIPQ13075 1403 aa25.83■■□□□ 1.73
CHGA-206ENST00000556876 VGFO15240 615 aaPredicted RBP25.83■■□□□ 1.73
CHGA-206ENST00000556876 TRIM52Q96A61 297 aa25.81■■□□□ 1.72
CHGA-206ENST00000556876 SETBP1Q9Y6X0 1596 aa25.81■■□□□ 1.72
CHGA-206ENST00000556876 RPGRIP1LQ68CZ1 1315 aa25.8■■□□□ 1.72
CHGA-206ENST00000556876 PTPRUQ92729 1446 aa25.79■■□□□ 1.72
CHGA-206ENST00000556876 POTEAQ6S8J7 498 aa25.78■■□□□ 1.72
CHGA-206ENST00000556876 HFM1A2PYH4 1435 aa25.77■■□□□ 1.72
CHGA-206ENST00000556876 BRINP3Q76B58 766 aa25.76■■□□□ 1.71
CHGA-206ENST00000556876 SLC4A1APQ9BWU0 796 aaKnown RBP25.76■■□□□ 1.71
CHGA-206ENST00000556876 PHLPP1O60346 1717 aa25.76■■□□□ 1.71
CHGA-206ENST00000556876 SPHKAPQ2M3C7 1700 aa25.76■■□□□ 1.71
CHGA-206ENST00000556876 ACIN1Q9UKV3 1341 aaKnown RBP25.75■■□□□ 1.71
CHGA-206ENST00000556876 MEX3CQ5U5Q3 659 aaKnown RBP25.75■■□□□ 1.71
CHGA-206ENST00000556876 ZNF772Q68DY9 489 aaPredicted RBP25.75■■□□□ 1.71
CHGA-206ENST00000556876 METP08581 1390 aa25.74■■□□□ 1.71
CHGA-206ENST00000556876 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.72■■□□□ 1.71
CHGA-206ENST00000556876 AHDC1Q5TGY3 1603 aaPredicted RBP25.71■■□□□ 1.71
CHGA-206ENST00000556876 LRRC59Q96AG4 307 aaKnown RBP25.71■■□□□ 1.71
CHGA-206ENST00000556876 COL16A1Q07092 1604 aaPredicted RBP25.69■■□□□ 1.7
CHGA-206ENST00000556876 ADGRL3Q9HAR2 1447 aa25.67■■□□□ 1.7
CHGA-206ENST00000556876 NEXMIFQ5QGS0 1516 aa25.67■■□□□ 1.7
CHGA-206ENST00000556876 NRXN3Q9Y4C0 1643 aa25.66■■□□□ 1.7
CHGA-206ENST00000556876 XRN1Q8IZH2 1706 aaKnown RBP25.66■■□□□ 1.7
CHGA-206ENST00000556876 MST1RQ04912 1400 aa25.65■■□□□ 1.7
CHGA-206ENST00000556876 CLTCL1P53675 1640 aa25.65■■□□□ 1.7
CHGA-206ENST00000556876 SETD5Q9C0A6 1442 aa25.64■■□□□ 1.7
CHGA-206ENST00000556876 PTCH1Q13635 1447 aa25.63■■□□□ 1.69
CHGA-206ENST00000556876 ASXL1Q8IXJ9 1541 aa25.61■■□□□ 1.69
CHGA-206ENST00000556876 KIF1BO60333 1816 aa25.6■■□□□ 1.69
CHGA-206ENST00000556876 PRAG1Q86YV5 1406 aa25.59■■□□□ 1.69
CHGA-206ENST00000556876 NUTM2BA6NNL0 878 aaPredicted RBP25.57■■□□□ 1.68
CHGA-206ENST00000556876 NUTM2EB1AL46 878 aaPredicted RBP25.57■■□□□ 1.68
CHGA-206ENST00000556876 RXRBP28702 533 aa25.57■■□□□ 1.68
CHGA-206ENST00000556876 NUTM2AQ8IVF1 878 aaPredicted RBP25.57■■□□□ 1.68
CHGA-206ENST00000556876 SHPRHQ149N8 1683 aa25.57■■□□□ 1.68
CHGA-206ENST00000556876 LRP6O75581 1613 aa25.55■■□□□ 1.68
CHGA-206ENST00000556876 CCDC144AA2RUR9 1427 aa25.55■■□□□ 1.68
CHGA-206ENST00000556876 ANKRD30BQ9BXX2 1392 aa25.55■■□□□ 1.68
CHGA-206ENST00000556876 MPHOSPH9Q99550 1183 aa25.54■■□□□ 1.68
CHGA-206ENST00000556876 C1orf167Q5SNV9 1468 aa25.53■■□□□ 1.68
CHGA-206ENST00000556876 ROBO2Q9HCK4 1378 aa25.53■■□□□ 1.68
CHGA-206ENST00000556876 PNPLA6Q8IY17 1366 aa25.48■■□□□ 1.67
CHGA-206ENST00000556876 AFF2P51816 1311 aa25.48■■□□□ 1.67
CHGA-206ENST00000556876 SOS2Q07890 1332 aaPredicted RBP25.48■■□□□ 1.67
CHGA-206ENST00000556876 FOXD1Q16676 465 aa25.47■■□□□ 1.67
CHGA-206ENST00000556876 RGL3Q3MIN7 710 aa25.47■■□□□ 1.67
CHGA-206ENST00000556876 NHSL1Q5SYE7 1610 aa25.46■■□□□ 1.67
CHGA-206ENST00000556876 CDK12Q9NYV4 1490 aaPredicted RBP25.46■■□□□ 1.67
CHGA-206ENST00000556876 C8orf37Q96NL8 207 aa25.45■■□□□ 1.66
CHGA-206ENST00000556876 ORAI2Q96SN7 254 aa25.45■■□□□ 1.66
CHGA-206ENST00000556876 NPHP3Q7Z494 1330 aa25.44■■□□□ 1.66
CHGA-206ENST00000556876 DDX17Q92841 729 aaKnown RBP25.44■■□□□ 1.66
CHGA-206ENST00000556876 LRPPRCP42704 1394 aaKnown RBP25.44■■□□□ 1.66
CHGA-206ENST00000556876 ADGRF5Q8IZF2 1346 aa25.43■■□□□ 1.66
CHGA-206ENST00000556876 RBM6P78332 1123 aaKnown RBP25.43■■□□□ 1.66
CHGA-206ENST00000556876 NGLY1Q96IV0 654 aa25.43■■□□□ 1.66
CHGA-206ENST00000556876 QTRT2Q9H974 415 aaKnown RBP25.43■■□□□ 1.66
CHGA-206ENST00000556876 ABCC11Q96J66 1382 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms