RNA–Protein interactions for RNA: ENST00000556830.1

LRP1-212, Transcript of LDL receptor related protein 1, humanhuman

TSL 2

Gene LRP1, Length 1,847 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-212ENST00000556830 BECN1Q14457 450 aa16.55■□□□□ 0.24
LRP1-212ENST00000556830 DCAF11Q8TEB1 546 aa16.55■□□□□ 0.24
LRP1-212ENST00000556830 IQGAP3Q86VI3 1631 aa16.55■□□□□ 0.24
LRP1-212ENST00000556830 INO80Q9ULG1 1556 aaPredicted RBP16.55■□□□□ 0.24
LRP1-212ENST00000556830 VIRMAQ69YN4 1812 aaKnown RBP16.54■□□□□ 0.24
LRP1-212ENST00000556830 SLC4A3P48751 1232 aa16.53■□□□□ 0.24
LRP1-212ENST00000556830 CDCA7LQ96GN5 454 aa16.52■□□□□ 0.24
LRP1-212ENST00000556830 LAMC1P11047 1609 aa16.51■□□□□ 0.23
LRP1-212ENST00000556830 ST20-MTHFSA0A0A6YYL1 179 aa16.51■□□□□ 0.23
LRP1-212ENST00000556830 RRP9O43818 475 aaKnown RBP16.51■□□□□ 0.23
LRP1-212ENST00000556830 CNGB1Q14028 1251 aaPredicted RBP16.51■□□□□ 0.23
LRP1-212ENST00000556830 ZMYM3Q14202 1370 aa16.51■□□□□ 0.23
LRP1-212ENST00000556830 ADGRL1O94910 1474 aa16.5■□□□□ 0.23
LRP1-212ENST00000556830 MAGI2Q86UL8 1455 aa16.5■□□□□ 0.23
LRP1-212ENST00000556830 CCDC144AA2RUR9 1427 aa16.5■□□□□ 0.23
LRP1-212ENST00000556830 PLIN1O60240 522 aa16.5■□□□□ 0.23
LRP1-212ENST00000556830 ATP7AQ04656 1500 aa16.5■□□□□ 0.23
LRP1-212ENST00000556830 ERBINQ96RT1 1412 aa16.5■□□□□ 0.23
LRP1-212ENST00000556830 PER1O15534 1290 aaPredicted RBP16.49■□□□□ 0.23
LRP1-212ENST00000556830 ZNF326Q5BKZ1 582 aaKnown RBP16.49■□□□□ 0.23
LRP1-212ENST00000556830 CFAP74Q9C0B2 1584 aa16.47■□□□□ 0.23
LRP1-212ENST00000556830 CLCN1P35523 988 aa16.47■□□□□ 0.23
LRP1-212ENST00000556830 AFAP1Q8N556 730 aa16.47■□□□□ 0.23
LRP1-212ENST00000556830 MAPK8IP3Q9UPT6 1336 aa16.46■□□□□ 0.23
LRP1-212ENST00000556830 COL17A1Q9UMD9 1497 aaPredicted RBP16.46■□□□□ 0.23
LRP1-212ENST00000556830 DEPDC5O75140 1603 aa16.46■□□□□ 0.23
LRP1-212ENST00000556830 KIDINS220Q9ULH0 1771 aa16.46■□□□□ 0.23
LRP1-212ENST00000556830 RRAGDQ9NQL2 400 aaPredicted RBP16.46■□□□□ 0.23
LRP1-212ENST00000556830 SPAG9O60271 1321 aaKnown RBP16.46■□□□□ 0.23
LRP1-212ENST00000556830 GPRASP1Q5JY77 1395 aa16.45■□□□□ 0.22
LRP1-212ENST00000556830 NINLQ9Y2I6 1382 aa16.45■□□□□ 0.22
LRP1-212ENST00000556830 NPM1P06748 294 aaKnown RBP eCLIP16.45■□□□□ 0.22
LRP1-212ENST00000556830 RTEL1-TNFRSF6BF6WH68 1400 aa16.45■□□□□ 0.22
LRP1-212ENST00000556830 SCAPERQ9BY12 1400 aa16.45■□□□□ 0.22
LRP1-212ENST00000556830 ISY1Q9ULR0 285 aaKnown RBP16.45■□□□□ 0.22
LRP1-212ENST00000556830 SENP3-EIF4A1A0A087X0R7 540 aa16.44■□□□□ 0.22
LRP1-212ENST00000556830 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.44■□□□□ 0.22
LRP1-212ENST00000556830 PNNQ9H307 717 aaKnown RBP16.44■□□□□ 0.22
LRP1-212ENST00000556830 TRPM1Q7Z4N2 1603 aa16.43■□□□□ 0.22
LRP1-212ENST00000556830 C20orf194Q5TEA3 1177 aa16.42■□□□□ 0.22
LRP1-212ENST00000556830 DUSP27Q5VZP5 1158 aa16.42■□□□□ 0.22
LRP1-212ENST00000556830 POGKQ9P215 609 aa16.42■□□□□ 0.22
LRP1-212ENST00000556830 FSD2A1L4K1 749 aa16.42■□□□□ 0.22
LRP1-212ENST00000556830 HSP90AA1P07900 732 aaKnown RBP16.42■□□□□ 0.22
LRP1-212ENST00000556830 AAMPQ13685 434 aa16.42■□□□□ 0.22
LRP1-212ENST00000556830 ZNF521Q96K83 1311 aa16.42■□□□□ 0.22
LRP1-212ENST00000556830 GOLGA6L3A6NEY3 463 aa16.41■□□□□ 0.22
LRP1-212ENST00000556830 TRHP20396 242 aaPredicted RBP16.41■□□□□ 0.22
LRP1-212ENST00000556830 HSP90AA2PQ14568 343 aaPredicted RBP16.41■□□□□ 0.22
LRP1-212ENST00000556830 USP19O94966 1318 aa16.41■□□□□ 0.22
LRP1-212ENST00000556830 EIF2AK4Q9P2K8 1649 aaKnown RBP16.41■□□□□ 0.22
LRP1-212ENST00000556830 SKAP1Q86WV1 359 aa16.4■□□□□ 0.22
LRP1-212ENST00000556830 NGEFQ8N5V2 710 aa16.4■□□□□ 0.22
LRP1-212ENST00000556830 CD109Q6YHK3 1445 aa16.4■□□□□ 0.22
LRP1-212ENST00000556830 GOLGA2Q08379 1002 aa16.4■□□□□ 0.22
LRP1-212ENST00000556830 PRAG1Q86YV5 1406 aa16.4■□□□□ 0.22
LRP1-212ENST00000556830 PLA2R1Q13018 1463 aa16.4■□□□□ 0.22
LRP1-212ENST00000556830 MROH1Q8NDA8 1641 aa16.4■□□□□ 0.22
LRP1-212ENST00000556830 ANTXR1Q9H6X2 564 aa16.39■□□□□ 0.21
LRP1-212ENST00000556830 MAP3K4Q9Y6R4 1608 aa16.39■□□□□ 0.21
LRP1-212ENST00000556830 SPHKAPQ2M3C7 1700 aa16.38■□□□□ 0.21
LRP1-212ENST00000556830 PRDM15P57071 1507 aaPredicted RBP16.38■□□□□ 0.21
LRP1-212ENST00000556830 TET3O43151 1660 aa16.37■□□□□ 0.21
LRP1-212ENST00000556830 HECW2Q9P2P5 1572 aa16.37■□□□□ 0.21
LRP1-212ENST00000556830 ZNF518AQ6AHZ1 1483 aa16.37■□□□□ 0.21
LRP1-212ENST00000556830 CGNL1Q0VF96 1302 aa16.37■□□□□ 0.21
LRP1-212ENST00000556830 TRMT2AQ8IZ69 625 aaKnown RBP16.37■□□□□ 0.21
LRP1-212ENST00000556830 UPF2Q9HAU5 1272 aaKnown RBP16.37■□□□□ 0.21
LRP1-212ENST00000556830 NAP1L5Q96NT1 182 aaPredicted RBP16.36■□□□□ 0.21
LRP1-212ENST00000556830 NLRP1Q9C000 1473 aa16.36■□□□□ 0.21
LRP1-212ENST00000556830 CEP152O94986 1710 aa16.36■□□□□ 0.21
LRP1-212ENST00000556830 POGZQ7Z3K3 1410 aa16.36■□□□□ 0.21
LRP1-212ENST00000556830 RGS3P49796 1198 aa16.35■□□□□ 0.21
LRP1-212ENST00000556830 MRE11P49959 708 aa16.35■□□□□ 0.21
LRP1-212ENST00000556830 ABCA6Q8N139 1617 aa16.35■□□□□ 0.21
LRP1-212ENST00000556830 VWDEQ8N2E2 1590 aa16.35■□□□□ 0.21
LRP1-212ENST00000556830 SLFN5Q08AF3 891 aa16.35■□□□□ 0.21
LRP1-212ENST00000556830 PDE3AQ14432 1141 aa16.35■□□□□ 0.21
LRP1-212ENST00000556830 NKTRP30414 1462 aaKnown RBP16.35■□□□□ 0.21
LRP1-212ENST00000556830 XRCC6P12956 609 aaKnown RBP eCLIP16.34■□□□□ 0.21
LRP1-212ENST00000556830 ZMYND15Q9H091 742 aa16.34■□□□□ 0.21
LRP1-212ENST00000556830 PLEKHH1Q9ULM0 1364 aa16.34■□□□□ 0.21
LRP1-212ENST00000556830 WDR43Q15061 677 aaKnown RBP eCLIP16.33■□□□□ 0.21
LRP1-212ENST00000556830 RICTORQ6R327 1708 aa16.33■□□□□ 0.21
LRP1-212ENST00000556830 FRMPD1Q5SYB0 1578 aa16.33■□□□□ 0.2
LRP1-212ENST00000556830 VSIG10Q8N0Z9 540 aa16.33■□□□□ 0.2
LRP1-212ENST00000556830 CENPJQ9HC77 1338 aaPredicted RBP16.32■□□□□ 0.2
LRP1-212ENST00000556830 PIK3C2GO75747 1445 aa16.32■□□□□ 0.2
LRP1-212ENST00000556830 ADAMTS8Q9UP79 889 aa16.32■□□□□ 0.2
LRP1-212ENST00000556830 TSPOAP1O95153 1857 aa16.32■□□□□ 0.2
LRP1-212ENST00000556830 CLTCL1P53675 1640 aa16.31■□□□□ 0.2
LRP1-212ENST00000556830 RNF17Q9BXT8 1623 aaKnown RBP16.31■□□□□ 0.2
LRP1-212ENST00000556830 TPM2P07951 284 aa16.31■□□□□ 0.2
LRP1-212ENST00000556830 TMF1P82094 1093 aa16.31■□□□□ 0.2
LRP1-212ENST00000556830 DIP2BQ9P265 1576 aa16.31■□□□□ 0.2
LRP1-212ENST00000556830 ATP10AO60312 1499 aa16.31■□□□□ 0.2
LRP1-212ENST00000556830 A2MP01023 1474 aa16.31■□□□□ 0.2
LRP1-212ENST00000556830 TRPM2O94759 1503 aa16.3■□□□□ 0.2
LRP1-212ENST00000556830 MCM4P33991 863 aa16.3■□□□□ 0.2
LRP1-212ENST00000556830 CC2D1BQ5T0F9 858 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms