RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 TMF1P82094 1093 aa25.13■■□□□ 1.61
SDR39U1-220ENST00000556548 MYOM2P54296 1465 aa25.13■■□□□ 1.61
SDR39U1-220ENST00000556548 IDI1Q13907 227 aa25.12■■□□□ 1.61
SDR39U1-220ENST00000556548 FBXO31Q5XUX0 539 aaPredicted RBP25.12■■□□□ 1.61
SDR39U1-220ENST00000556548 SYNMO15061 1565 aa25.12■■□□□ 1.61
SDR39U1-220ENST00000556548 SCAF11Q99590 1463 aaKnown RBP25.11■■□□□ 1.61
SDR39U1-220ENST00000556548 ARHGAP31Q2M1Z3 1444 aa25.11■■□□□ 1.61
SDR39U1-220ENST00000556548 FAM9BQ8IZU0 186 aa25.11■■□□□ 1.61
SDR39U1-220ENST00000556548 SENP3Q9H4L4 574 aaPredicted RBP25.1■■□□□ 1.61
SDR39U1-220ENST00000556548 ZC3H13Q5T200 1668 aaKnown RBP25.09■■□□□ 1.61
SDR39U1-220ENST00000556548 IFT172Q9UG01 1749 aa25.09■■□□□ 1.61
SDR39U1-220ENST00000556548 IQGAP1P46940 1657 aa25.08■■□□□ 1.61
SDR39U1-220ENST00000556548 HNRNPUQ00839 825 aaKnown RBP eCLIP25.07■■□□□ 1.6
SDR39U1-220ENST00000556548 NRXN1Q9ULB1 1477 aa25.04■■□□□ 1.6
SDR39U1-220ENST00000556548 PIK3C2BO00750 1634 aa25.03■■□□□ 1.6
SDR39U1-220ENST00000556548 KIAA1210Q9ULL0 1709 aa25.03■■□□□ 1.6
SDR39U1-220ENST00000556548 RPGRIP1LQ68CZ1 1315 aa25.03■■□□□ 1.6
SDR39U1-220ENST00000556548 TMEM132EQ6IEE7 984 aa25.03■■□□□ 1.6
SDR39U1-220ENST00000556548 PANK3Q9H999 370 aa25.03■■□□□ 1.6
SDR39U1-220ENST00000556548 SLC52A1Q9NWF4 448 aa25.03■■□□□ 1.6
SDR39U1-220ENST00000556548 EIF3AQ14152 1382 aaKnown RBP25.02■■□□□ 1.6
SDR39U1-220ENST00000556548 PPLO60437 1756 aa25.01■■□□□ 1.59
SDR39U1-220ENST00000556548 REREQ9P2R6 1566 aa25.01■■□□□ 1.59
SDR39U1-220ENST00000556548 AGLP35573 1532 aa25.01■■□□□ 1.59
SDR39U1-220ENST00000556548 PREX1Q8TCU6 1659 aa25■■□□□ 1.59
SDR39U1-220ENST00000556548 PIK3C2GO75747 1445 aa25■■□□□ 1.59
SDR39U1-220ENST00000556548 C14orf93Q9H972 538 aaKnown RBP25■■□□□ 1.59
SDR39U1-220ENST00000556548 TRAK1Q9UPV9 953 aa25■■□□□ 1.59
SDR39U1-220ENST00000556548 PER1O15534 1290 aaPredicted RBP24.98■■□□□ 1.59
SDR39U1-220ENST00000556548 ARHGEF40Q8TER5 1519 aa24.98■■□□□ 1.59
SDR39U1-220ENST00000556548 VGFO15240 615 aaPredicted RBP24.97■■□□□ 1.59
SDR39U1-220ENST00000556548 CLTCQ00610 1675 aaKnown RBP24.97■■□□□ 1.59
SDR39U1-220ENST00000556548 CC2D1BQ5T0F9 858 aaKnown RBP24.96■■□□□ 1.59
SDR39U1-220ENST00000556548 PPP6R1Q9UPN7 881 aa24.95■■□□□ 1.58
SDR39U1-220ENST00000556548 ERVK-7P63135 1459 aa24.95■■□□□ 1.58
SDR39U1-220ENST00000556548 NEXMIFQ5QGS0 1516 aa24.95■■□□□ 1.58
SDR39U1-220ENST00000556548 STAG3Q9UJ98 1225 aa24.95■■□□□ 1.58
SDR39U1-220ENST00000556548 TRHP20396 242 aaPredicted RBP24.94■■□□□ 1.58
SDR39U1-220ENST00000556548 ESF1Q9H501 851 aaKnown RBP24.94■■□□□ 1.58
SDR39U1-220ENST00000556548 RALBP1Q15311 655 aa24.92■■□□□ 1.58
SDR39U1-220ENST00000556548 CDCA8Q53HL2 280 aa24.92■■□□□ 1.58
SDR39U1-220ENST00000556548 TMC1Q8TDI8 760 aa24.92■■□□□ 1.58
SDR39U1-220ENST00000556548 KTN1Q86UP2 1357 aaKnown RBP24.92■■□□□ 1.58
SDR39U1-220ENST00000556548 MYO5BQ9ULV0 1848 aa24.9■■□□□ 1.58
SDR39U1-220ENST00000556548 MYBBP1AQ9BQG0 1328 aaKnown RBP24.9■■□□□ 1.58
SDR39U1-220ENST00000556548 TMEM131LA2VDJ0 1609 aa24.89■■□□□ 1.58
SDR39U1-220ENST00000556548 CENPJQ9HC77 1338 aaPredicted RBP24.89■■□□□ 1.58
SDR39U1-220ENST00000556548 SETBP1Q9Y6X0 1596 aa24.88■■□□□ 1.57
SDR39U1-220ENST00000556548 ADGRB1O14514 1584 aa24.88■■□□□ 1.57
SDR39U1-220ENST00000556548 SENP3-EIF4A1A0A087X0R7 540 aa24.86■■□□□ 1.57
SDR39U1-220ENST00000556548 PARD3Q8TEW0 1356 aa24.85■■□□□ 1.57
SDR39U1-220ENST00000556548 STK26Q9P289 416 aa24.85■■□□□ 1.57
SDR39U1-220ENST00000556548 ZMYM3Q14202 1370 aa24.85■■□□□ 1.57
SDR39U1-220ENST00000556548 PNISRQ8TF01 805 aaKnown RBP24.84■■□□□ 1.57
SDR39U1-220ENST00000556548 KNSTRNQ9Y448 316 aa24.84■■□□□ 1.57
SDR39U1-220ENST00000556548 SAFB2Q14151 953 aaKnown RBP eCLIP24.81■■□□□ 1.56
SDR39U1-220ENST00000556548 BRD4O60885 1362 aaPredicted RBP24.8■■□□□ 1.56
SDR39U1-220ENST00000556548 SLC24A1O60721 1099 aa24.8■■□□□ 1.56
SDR39U1-220ENST00000556548 ZFYVE9O95405 1425 aa24.8■■□□□ 1.56
SDR39U1-220ENST00000556548 SPATA31D1Q6ZQQ2 1576 aa24.8■■□□□ 1.56
SDR39U1-220ENST00000556548 KDM5AP29375 1690 aaKnown RBP24.8■■□□□ 1.56
SDR39U1-220ENST00000556548 NLRP13Q86W25 1043 aa24.79■■□□□ 1.56
SDR39U1-220ENST00000556548 MYO3AQ8NEV4 1616 aa24.78■■□□□ 1.56
SDR39U1-220ENST00000556548 SUPT16HQ9Y5B9 1047 aaKnown RBP24.78■■□□□ 1.56
SDR39U1-220ENST00000556548 MYOM1P52179 1685 aa24.77■■□□□ 1.56
SDR39U1-220ENST00000556548 SBNO2Q9Y2G9 1366 aa24.76■■□□□ 1.55
SDR39U1-220ENST00000556548 A2ML1A8K2U0 1454 aa24.76■■□□□ 1.55
SDR39U1-220ENST00000556548 AMER1Q5JTC6 1135 aaPredicted RBP24.75■■□□□ 1.55
SDR39U1-220ENST00000556548 QRICH2Q9H0J4 1663 aa24.75■■□□□ 1.55
SDR39U1-220ENST00000556548 PLPPR3Q6T4P5 718 aa24.75■■□□□ 1.55
SDR39U1-220ENST00000556548 ZBED9Q6R2W3 1325 aa24.74■■□□□ 1.55
SDR39U1-220ENST00000556548 ASXL1Q8IXJ9 1541 aa24.73■■□□□ 1.55
SDR39U1-220ENST00000556548 CEBPAP49715 358 aaPredicted RBP24.72■■□□□ 1.55
SDR39U1-220ENST00000556548 FKBP8Q14318 412 aa24.72■■□□□ 1.55
SDR39U1-220ENST00000556548 CARD14Q9BXL6 1004 aa24.72■■□□□ 1.55
SDR39U1-220ENST00000556548 RIMS2Q9UQ26 1411 aa24.71■■□□□ 1.55
SDR39U1-220ENST00000556548 SLC12A5Q9H2X9 1139 aa24.7■■□□□ 1.55
SDR39U1-220ENST00000556548 ARHGEF28Q8N1W1 1705 aaKnown RBP24.68■■□□□ 1.54
SDR39U1-220ENST00000556548 TNRQ92752 1358 aa24.68■■□□□ 1.54
SDR39U1-220ENST00000556548 PRAM1Q96QH2 718 aa24.68■■□□□ 1.54
SDR39U1-220ENST00000556548 LRPPRCP42704 1394 aaKnown RBP24.67■■□□□ 1.54
SDR39U1-220ENST00000556548 CABP2Q9NPB3 220 aa24.67■■□□□ 1.54
SDR39U1-220ENST00000556548 ALKQ9UM73 1620 aa24.67■■□□□ 1.54
SDR39U1-220ENST00000556548 EVC2Q86UK5 1308 aa24.66■■□□□ 1.54
SDR39U1-220ENST00000556548 POGKQ9P215 609 aa24.66■■□□□ 1.54
SDR39U1-220ENST00000556548 YTHDC2Q9H6S0 1430 aaKnown RBP24.66■■□□□ 1.54
SDR39U1-220ENST00000556548 PPP2R1AP30153 589 aa24.66■■□□□ 1.54
SDR39U1-220ENST00000556548 BCANQ96GW7 911 aa24.65■■□□□ 1.54
SDR39U1-220ENST00000556548 MINK1Q8N4C8 1332 aaPredicted RBP24.65■■□□□ 1.54
SDR39U1-220ENST00000556548 NEFLP07196 543 aa24.64■■□□□ 1.53
SDR39U1-220ENST00000556548 SALL2Q9Y467 1007 aaPredicted RBP24.63■■□□□ 1.53
SDR39U1-220ENST00000556548 TULP4Q9NRJ4 1543 aa24.62■■□□□ 1.53
SDR39U1-220ENST00000556548 PTPRMP28827 1452 aa24.61■■□□□ 1.53
SDR39U1-220ENST00000556548 SRPK2P78362 688 aaKnown RBP24.61■■□□□ 1.53
SDR39U1-220ENST00000556548 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.58■■□□□ 1.53
SDR39U1-220ENST00000556548 NSD3Q9BZ95 1437 aa24.58■■□□□ 1.53
SDR39U1-220ENST00000556548 WAPLQ7Z5K2 1190 aa24.58■■□□□ 1.53
SDR39U1-220ENST00000556548 IRX6P78412 446 aaPredicted RBP24.57■■□□□ 1.52
SDR39U1-220ENST00000556548 NPC1L1Q9UHC9 1359 aa24.57■■□□□ 1.52
SDR39U1-220ENST00000556548 TNNT2P45379 298 aaPredicted RBP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms