RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 TMF1P82094 1093 aa25.13■■□□□ 1.61
SDR39U1-220ENST00000556548 MYOM2P54296 1465 aa25.13■■□□□ 1.61
SDR39U1-220ENST00000556548 IDI1Q13907 227 aa25.12■■□□□ 1.61
SDR39U1-220ENST00000556548 FBXO31Q5XUX0 539 aaPredicted RBP25.12■■□□□ 1.61
SDR39U1-220ENST00000556548 SYNMO15061 1565 aa25.12■■□□□ 1.61
SDR39U1-220ENST00000556548 SCAF11Q99590 1463 aaKnown RBP25.11■■□□□ 1.61
SDR39U1-220ENST00000556548 ARHGAP31Q2M1Z3 1444 aa25.11■■□□□ 1.61
SDR39U1-220ENST00000556548 FAM9BQ8IZU0 186 aa25.11■■□□□ 1.61
SDR39U1-220ENST00000556548 SENP3Q9H4L4 574 aaPredicted RBP25.1■■□□□ 1.61
SDR39U1-220ENST00000556548 ZC3H13Q5T200 1668 aaKnown RBP25.09■■□□□ 1.61
SDR39U1-220ENST00000556548 IFT172Q9UG01 1749 aa25.09■■□□□ 1.61
SDR39U1-220ENST00000556548 IQGAP1P46940 1657 aa25.08■■□□□ 1.61
SDR39U1-220ENST00000556548 HNRNPUQ00839 825 aaKnown RBP eCLIP25.07■■□□□ 1.6
SDR39U1-220ENST00000556548 NRXN1Q9ULB1 1477 aa25.04■■□□□ 1.6
SDR39U1-220ENST00000556548 PIK3C2BO00750 1634 aa25.03■■□□□ 1.6
SDR39U1-220ENST00000556548 KIAA1210Q9ULL0 1709 aa25.03■■□□□ 1.6
SDR39U1-220ENST00000556548 RPGRIP1LQ68CZ1 1315 aa25.03■■□□□ 1.6
SDR39U1-220ENST00000556548 TMEM132EQ6IEE7 984 aa25.03■■□□□ 1.6
SDR39U1-220ENST00000556548 PANK3Q9H999 370 aa25.03■■□□□ 1.6
SDR39U1-220ENST00000556548 SLC52A1Q9NWF4 448 aa25.03■■□□□ 1.6
SDR39U1-220ENST00000556548 EIF3AQ14152 1382 aaKnown RBP25.02■■□□□ 1.6
SDR39U1-220ENST00000556548 PPLO60437 1756 aa25.01■■□□□ 1.59
SDR39U1-220ENST00000556548 REREQ9P2R6 1566 aa25.01■■□□□ 1.59
SDR39U1-220ENST00000556548 AGLP35573 1532 aa25.01■■□□□ 1.59
SDR39U1-220ENST00000556548 PREX1Q8TCU6 1659 aa25■■□□□ 1.59
SDR39U1-220ENST00000556548 PIK3C2GO75747 1445 aa25■■□□□ 1.59
SDR39U1-220ENST00000556548 C14orf93Q9H972 538 aaKnown RBP25■■□□□ 1.59
SDR39U1-220ENST00000556548 TRAK1Q9UPV9 953 aa25■■□□□ 1.59
SDR39U1-220ENST00000556548 PER1O15534 1290 aaPredicted RBP24.98■■□□□ 1.59
SDR39U1-220ENST00000556548 ARHGEF40Q8TER5 1519 aa24.98■■□□□ 1.59
SDR39U1-220ENST00000556548 VGFO15240 615 aaPredicted RBP24.97■■□□□ 1.59
SDR39U1-220ENST00000556548 CLTCQ00610 1675 aaKnown RBP24.97■■□□□ 1.59
SDR39U1-220ENST00000556548 CC2D1BQ5T0F9 858 aaKnown RBP24.96■■□□□ 1.59
SDR39U1-220ENST00000556548 PPP6R1Q9UPN7 881 aa24.95■■□□□ 1.58
SDR39U1-220ENST00000556548 ERVK-7P63135 1459 aa24.95■■□□□ 1.58
SDR39U1-220ENST00000556548 NEXMIFQ5QGS0 1516 aa24.95■■□□□ 1.58
SDR39U1-220ENST00000556548 STAG3Q9UJ98 1225 aa24.95■■□□□ 1.58
SDR39U1-220ENST00000556548 TRHP20396 242 aaPredicted RBP24.94■■□□□ 1.58
SDR39U1-220ENST00000556548 ESF1Q9H501 851 aaKnown RBP24.94■■□□□ 1.58
SDR39U1-220ENST00000556548 RALBP1Q15311 655 aa24.92■■□□□ 1.58
SDR39U1-220ENST00000556548 CDCA8Q53HL2 280 aa24.92■■□□□ 1.58
SDR39U1-220ENST00000556548 TMC1Q8TDI8 760 aa24.92■■□□□ 1.58
SDR39U1-220ENST00000556548 KTN1Q86UP2 1357 aaKnown RBP24.92■■□□□ 1.58
SDR39U1-220ENST00000556548 MYO5BQ9ULV0 1848 aa24.9■■□□□ 1.58
SDR39U1-220ENST00000556548 MYBBP1AQ9BQG0 1328 aaKnown RBP24.9■■□□□ 1.58
SDR39U1-220ENST00000556548 TMEM131LA2VDJ0 1609 aa24.89■■□□□ 1.58
SDR39U1-220ENST00000556548 CENPJQ9HC77 1338 aaPredicted RBP24.89■■□□□ 1.58
SDR39U1-220ENST00000556548 SETBP1Q9Y6X0 1596 aa24.88■■□□□ 1.57
SDR39U1-220ENST00000556548 ADGRB1O14514 1584 aa24.88■■□□□ 1.57
SDR39U1-220ENST00000556548 SENP3-EIF4A1A0A087X0R7 540 aa24.86■■□□□ 1.57
SDR39U1-220ENST00000556548 PARD3Q8TEW0 1356 aa24.85■■□□□ 1.57
SDR39U1-220ENST00000556548 STK26Q9P289 416 aa24.85■■□□□ 1.57
SDR39U1-220ENST00000556548 ZMYM3Q14202 1370 aa24.85■■□□□ 1.57
SDR39U1-220ENST00000556548 PNISRQ8TF01 805 aaKnown RBP24.84■■□□□ 1.57
SDR39U1-220ENST00000556548 KNSTRNQ9Y448 316 aa24.84■■□□□ 1.57
SDR39U1-220ENST00000556548 SAFB2Q14151 953 aaKnown RBP eCLIP24.81■■□□□ 1.56
SDR39U1-220ENST00000556548 BRD4O60885 1362 aaPredicted RBP24.8■■□□□ 1.56
SDR39U1-220ENST00000556548 SLC24A1O60721 1099 aa24.8■■□□□ 1.56
SDR39U1-220ENST00000556548 ZFYVE9O95405 1425 aa24.8■■□□□ 1.56
SDR39U1-220ENST00000556548 SPATA31D1Q6ZQQ2 1576 aa24.8■■□□□ 1.56
SDR39U1-220ENST00000556548 KDM5AP29375 1690 aaKnown RBP24.8■■□□□ 1.56
SDR39U1-220ENST00000556548 NLRP13Q86W25 1043 aa24.79■■□□□ 1.56
SDR39U1-220ENST00000556548 MYO3AQ8NEV4 1616 aa24.78■■□□□ 1.56
SDR39U1-220ENST00000556548 SUPT16HQ9Y5B9 1047 aaKnown RBP24.78■■□□□ 1.56
SDR39U1-220ENST00000556548 MYOM1P52179 1685 aa24.77■■□□□ 1.56
SDR39U1-220ENST00000556548 SBNO2Q9Y2G9 1366 aa24.76■■□□□ 1.55
SDR39U1-220ENST00000556548 A2ML1A8K2U0 1454 aa24.76■■□□□ 1.55
SDR39U1-220ENST00000556548 AMER1Q5JTC6 1135 aaPredicted RBP24.75■■□□□ 1.55
SDR39U1-220ENST00000556548 QRICH2Q9H0J4 1663 aa24.75■■□□□ 1.55
SDR39U1-220ENST00000556548 PLPPR3Q6T4P5 718 aa24.75■■□□□ 1.55
SDR39U1-220ENST00000556548 ZBED9Q6R2W3 1325 aa24.74■■□□□ 1.55
SDR39U1-220ENST00000556548 ASXL1Q8IXJ9 1541 aa24.73■■□□□ 1.55
SDR39U1-220ENST00000556548 CEBPAP49715 358 aaPredicted RBP24.72■■□□□ 1.55
SDR39U1-220ENST00000556548 FKBP8Q14318 412 aa24.72■■□□□ 1.55
SDR39U1-220ENST00000556548 CARD14Q9BXL6 1004 aa24.72■■□□□ 1.55
SDR39U1-220ENST00000556548 RIMS2Q9UQ26 1411 aa24.71■■□□□ 1.55
SDR39U1-220ENST00000556548 SLC12A5Q9H2X9 1139 aa24.7■■□□□ 1.55
SDR39U1-220ENST00000556548 ARHGEF28Q8N1W1 1705 aaKnown RBP24.68■■□□□ 1.54
SDR39U1-220ENST00000556548 TNRQ92752 1358 aa24.68■■□□□ 1.54
SDR39U1-220ENST00000556548 PRAM1Q96QH2 718 aa24.68■■□□□ 1.54
SDR39U1-220ENST00000556548 LRPPRCP42704 1394 aaKnown RBP24.67■■□□□ 1.54
SDR39U1-220ENST00000556548 CABP2Q9NPB3 220 aa24.67■■□□□ 1.54
SDR39U1-220ENST00000556548 ALKQ9UM73 1620 aa24.67■■□□□ 1.54
SDR39U1-220ENST00000556548 EVC2Q86UK5 1308 aa24.66■■□□□ 1.54
SDR39U1-220ENST00000556548 POGKQ9P215 609 aa24.66■■□□□ 1.54
SDR39U1-220ENST00000556548 YTHDC2Q9H6S0 1430 aaKnown RBP24.66■■□□□ 1.54
SDR39U1-220ENST00000556548 PPP2R1AP30153 589 aa24.66■■□□□ 1.54
SDR39U1-220ENST00000556548 BCANQ96GW7 911 aa24.65■■□□□ 1.54
SDR39U1-220ENST00000556548 MINK1Q8N4C8 1332 aaPredicted RBP24.65■■□□□ 1.54
SDR39U1-220ENST00000556548 NEFLP07196 543 aa24.64■■□□□ 1.53
SDR39U1-220ENST00000556548 SALL2Q9Y467 1007 aaPredicted RBP24.63■■□□□ 1.53
SDR39U1-220ENST00000556548 TULP4Q9NRJ4 1543 aa24.62■■□□□ 1.53
SDR39U1-220ENST00000556548 PTPRMP28827 1452 aa24.61■■□□□ 1.53
SDR39U1-220ENST00000556548 SRPK2P78362 688 aaKnown RBP24.61■■□□□ 1.53
SDR39U1-220ENST00000556548 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.58■■□□□ 1.53
SDR39U1-220ENST00000556548 NSD3Q9BZ95 1437 aa24.58■■□□□ 1.53
SDR39U1-220ENST00000556548 WAPLQ7Z5K2 1190 aa24.58■■□□□ 1.53
SDR39U1-220ENST00000556548 IRX6P78412 446 aaPredicted RBP24.57■■□□□ 1.52
SDR39U1-220ENST00000556548 NPC1L1Q9UHC9 1359 aa24.57■■□□□ 1.52
SDR39U1-220ENST00000556548 TNNT2P45379 298 aaPredicted RBP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms