RNA–Protein interactions for RNA: ENST00000556507.1

TGFB3-205, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-205ENST00000556507 KCNC4Q03721 635 aa7.13□□□□□ -1.27
TGFB3-205ENST00000556507 PXYLP1Q8TE99 480 aa7.13□□□□□ -1.27
TGFB3-205ENST00000556507 METTL3Q86U44 580 aaKnown RBP7.12□□□□□ -1.27
TGFB3-205ENST00000556507 APLP1P51693 650 aa7.11□□□□□ -1.27
TGFB3-205ENST00000556507 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.1□□□□□ -1.27
TGFB3-205ENST00000556507 A0A0G2JS52 829 aa7.09□□□□□ -1.27
TGFB3-205ENST00000556507 PRR14Q9BWN1 585 aa7.09□□□□□ -1.27
TGFB3-205ENST00000556507 TJAP1Q5JTD0 557 aa7.08□□□□□ -1.28
TGFB3-205ENST00000556507 MTRQ99707 1265 aa7.08□□□□□ -1.28
TGFB3-205ENST00000556507 IL21Q9HBE4 155 aa7.08□□□□□ -1.28
TGFB3-205ENST00000556507 LMOD2Q6P5Q4 547 aa7.07□□□□□ -1.28
TGFB3-205ENST00000556507 CCDC180Q9P1Z9 1646 aa7.06□□□□□ -1.28
TGFB3-205ENST00000556507 MAP2K5Q13163 448 aa7.06□□□□□ -1.28
TGFB3-205ENST00000556507 KMT5BQ4FZB7 885 aa7.06□□□□□ -1.28
TGFB3-205ENST00000556507 RSPH4AQ5TD94 716 aa7.06□□□□□ -1.28
TGFB3-205ENST00000556507 DAXXQ9UER7 740 aaPredicted RBP7.06□□□□□ -1.28
TGFB3-205ENST00000556507 CFHP08603 1231 aa7.05□□□□□ -1.28
TGFB3-205ENST00000556507 SLC10A3P09131 477 aa7.05□□□□□ -1.28
TGFB3-205ENST00000556507 COPS2P61201 443 aa7.05□□□□□ -1.28
TGFB3-205ENST00000556507 NLRP7Q8WX94 980 aa7.05□□□□□ -1.28
TGFB3-205ENST00000556507 PHOX2BQ99453 314 aa7.05□□□□□ -1.28
TGFB3-205ENST00000556507 PCDHB3Q9Y5E6 796 aa7.05□□□□□ -1.28
TGFB3-205ENST00000556507 MINK1Q8N4C8 1332 aaPredicted RBP7.04□□□□□ -1.28
TGFB3-205ENST00000556507 IRF6O14896 467 aa7.04□□□□□ -1.28
TGFB3-205ENST00000556507 ZNF516Q92618 1163 aa7.04□□□□□ -1.28
TGFB3-205ENST00000556507 DDX11L8A8MPP1 907 aa7.03□□□□□ -1.28
TGFB3-205ENST00000556507 ACTN4O43707 911 aaKnown RBP7.03□□□□□ -1.28
TGFB3-205ENST00000556507 RGS20O76081 388 aa7.03□□□□□ -1.28
TGFB3-205ENST00000556507 RDH13Q8NBN7 331 aa7.03□□□□□ -1.28
TGFB3-205ENST00000556507 ZPR1O75312 459 aa7.01□□□□□ -1.29
TGFB3-205ENST00000556507 BLOC1S3Q6QNY0 202 aa7.01□□□□□ -1.29
TGFB3-205ENST00000556507 SULF1Q8IWU6 871 aa7.01□□□□□ -1.29
TGFB3-205ENST00000556507 KRI1Q8N9T8 703 aaKnown RBP7.01□□□□□ -1.29
TGFB3-205ENST00000556507 NKX2-3Q8TAU0 364 aa7□□□□□ -1.29
TGFB3-205ENST00000556507 CCDC102AQ96A19 550 aa7□□□□□ -1.29
TGFB3-205ENST00000556507 ZC3H15Q8WU90 426 aaKnown RBP6.99□□□□□ -1.29
TGFB3-205ENST00000556507 MDM2Q00987 491 aaPredicted RBP6.98□□□□□ -1.29
TGFB3-205ENST00000556507 PPP1R18Q6NYC8 613 aa6.98□□□□□ -1.29
TGFB3-205ENST00000556507 BARGINQ6ZT62 677 aa6.98□□□□□ -1.29
TGFB3-205ENST00000556507 NR1I2O75469 434 aa6.97□□□□□ -1.29
TGFB3-205ENST00000556507 ZMYND10O75800 440 aa6.97□□□□□ -1.29
TGFB3-205ENST00000556507 GCGRP47871 477 aa6.97□□□□□ -1.29
TGFB3-205ENST00000556507 PUS10Q3MIT2 529 aaKnown RBP6.97□□□□□ -1.29
TGFB3-205ENST00000556507 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.97□□□□□ -1.29
TGFB3-205ENST00000556507 GGCXP38435 758 aa6.96□□□□□ -1.3
TGFB3-205ENST00000556507 SCUBE3Q8IX30 993 aa6.96□□□□□ -1.3
TGFB3-205ENST00000556507 ZCCHC6Q5VYS8 1495 aaKnown RBP6.96□□□□□ -1.3
TGFB3-205ENST00000556507 TLL1O43897 1013 aa6.95□□□□□ -1.3
TGFB3-205ENST00000556507 ATP6V1AP38606 617 aa6.95□□□□□ -1.3
TGFB3-205ENST00000556507 FUT2Q10981 343 aa6.95□□□□□ -1.3
TGFB3-205ENST00000556507 CD46P15529 392 aa6.94□□□□□ -1.3
TGFB3-205ENST00000556507 CLCN1P35523 988 aa6.94□□□□□ -1.3
TGFB3-205ENST00000556507 TMUB1Q9BVT8 246 aa6.94□□□□□ -1.3
TGFB3-205ENST00000556507 GPCPD1Q9NPB8 672 aa6.94□□□□□ -1.3
TGFB3-205ENST00000556507 GRIPAP1Q4V328 841 aa6.93□□□□□ -1.3
TGFB3-205ENST00000556507 MORN1Q5T089 497 aa6.93□□□□□ -1.3
TGFB3-205ENST00000556507 ADH1BP00325 375 aa6.92□□□□□ -1.3
TGFB3-205ENST00000556507 PRKD2Q9BZL6 878 aa6.92□□□□□ -1.3
TGFB3-205ENST00000556507 SPSB2Q99619 263 aa6.91□□□□□ -1.3
TGFB3-205ENST00000556507 IRX2Q9BZI1 471 aaPredicted RBP6.91□□□□□ -1.3
TGFB3-205ENST00000556507 FAM217BQ9NTX9 383 aaPredicted RBP6.91□□□□□ -1.3
TGFB3-205ENST00000556507 SLC27A5Q9Y2P5 690 aa6.91□□□□□ -1.3
TGFB3-205ENST00000556507 RNF223E7ERA6 249 aa6.9□□□□□ -1.3
TGFB3-205ENST00000556507 KDM4AO75164 1064 aa6.9□□□□□ -1.3
TGFB3-205ENST00000556507 S1PR4O95977 384 aa6.9□□□□□ -1.3
TGFB3-205ENST00000556507 TTLL12Q14166 644 aaPredicted RBP6.9□□□□□ -1.3
TGFB3-205ENST00000556507 BCANQ96GW7 911 aa6.9□□□□□ -1.3
TGFB3-205ENST00000556507 SLC6A16Q9GZN6 736 aa6.9□□□□□ -1.3
TGFB3-205ENST00000556507 AMHR2Q16671 573 aa6.89□□□□□ -1.31
TGFB3-205ENST00000556507 REPIN1Q9BWE0 567 aaKnown RBP6.89□□□□□ -1.31
TGFB3-205ENST00000556507 SHROOM4Q9ULL8 1493 aa6.89□□□□□ -1.31
TGFB3-205ENST00000556507 PPEF1O14829 653 aaPredicted RBP6.88□□□□□ -1.31
TGFB3-205ENST00000556507 FMNL1O95466 1100 aaPredicted RBP6.88□□□□□ -1.31
TGFB3-205ENST00000556507 SSTR3P32745 418 aaPredicted RBP6.88□□□□□ -1.31
TGFB3-205ENST00000556507 USP46P62068 366 aa6.88□□□□□ -1.31
TGFB3-205ENST00000556507 AK7Q96M32 723 aa6.88□□□□□ -1.31
TGFB3-205ENST00000556507 V9GY48 417 aaPredicted RBP6.88□□□□□ -1.31
TGFB3-205ENST00000556507 NUTM1Q86Y26 1132 aa6.87□□□□□ -1.31
TGFB3-205ENST00000556507 ANKLE1Q8NAG6 615 aa6.87□□□□□ -1.31
TGFB3-205ENST00000556507 THAP11Q96EK4 314 aa6.87□□□□□ -1.31
TGFB3-205ENST00000556507 SALL2Q9Y467 1007 aaPredicted RBP6.87□□□□□ -1.31
TGFB3-205ENST00000556507 TRIM66O15016 1216 aa6.86□□□□□ -1.31
TGFB3-205ENST00000556507 Q3C1V9 767 aa6.86□□□□□ -1.31
TGFB3-205ENST00000556507 BRICD5Q6PL45 260 aa6.86□□□□□ -1.31
TGFB3-205ENST00000556507 SLC19A1P41440 591 aa6.85□□□□□ -1.31
TGFB3-205ENST00000556507 GIGYF2Q6Y7W6 1299 aaKnown RBP6.85□□□□□ -1.31
TGFB3-205ENST00000556507 RNF19BQ6ZMZ0 732 aa6.85□□□□□ -1.31
TGFB3-205ENST00000556507 HOXA2O43364 376 aa6.84□□□□□ -1.31
TGFB3-205ENST00000556507 FAM160A2Q8N612 972 aaPredicted RBP6.84□□□□□ -1.31
TGFB3-205ENST00000556507 SLC24A3Q9HC58 644 aa6.84□□□□□ -1.31
TGFB3-205ENST00000556507 DCAF1Q9Y4B6 1507 aa6.84□□□□□ -1.31
TGFB3-205ENST00000556507 PARP9Q8IXQ6 854 aa6.83□□□□□ -1.32
TGFB3-205ENST00000556507 HLA-CQ95604 372 aa6.83□□□□□ -1.32
TGFB3-205ENST00000556507 GFRA3O60609 400 aa6.82□□□□□ -1.32
TGFB3-205ENST00000556507 GUCA2AQ02747 115 aa6.82□□□□□ -1.32
TGFB3-205ENST00000556507 MSS51Q4VC12 460 aa6.82□□□□□ -1.32
TGFB3-205ENST00000556507 SPIRE2Q8WWL2 714 aa6.82□□□□□ -1.32
TGFB3-205ENST00000556507 EMID1Q96A84 441 aaPredicted RBP6.82□□□□□ -1.32
TGFB3-205ENST00000556507 BEGAINQ9BUH8 593 aa6.82□□□□□ -1.32
TGFB3-205ENST00000556507 PDE4DQ08499 809 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms