RNA–Protein interactions for RNA: ENST00000556454.1

CLMN-207, Transcript of calmin, humanhuman

TSL 2

Gene CLMN, Length 3,023 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMN-207ENST00000556454 ADGRL2O95490 1459 aa13.08□□□□□ -0.32
CLMN-207ENST00000556454 CLUAP1Q96AJ1 413 aa13.07□□□□□ -0.32
CLMN-207ENST00000556454 PDE3AQ14432 1141 aa13.07□□□□□ -0.32
CLMN-207ENST00000556454 WDR62O43379 1518 aa13.07□□□□□ -0.32
CLMN-207ENST00000556454 PKD2Q13563 968 aa13.07□□□□□ -0.32
CLMN-207ENST00000556454 CC2D1BQ5T0F9 858 aaKnown RBP13.07□□□□□ -0.32
CLMN-207ENST00000556454 SPRYD3Q8NCJ5 442 aa13.07□□□□□ -0.32
CLMN-207ENST00000556454 POLA1P09884 1462 aaPredicted RBP13.06□□□□□ -0.32
CLMN-207ENST00000556454 KDM5DQ9BY66 1539 aa13.06□□□□□ -0.32
CLMN-207ENST00000556454 CAMSAP2Q08AD1 1489 aa13.06□□□□□ -0.32
CLMN-207ENST00000556454 ANKRD30AQ9BXX3 1397 aa13.06□□□□□ -0.32
CLMN-207ENST00000556454 FAM13BQ9NYF5 915 aa13.06□□□□□ -0.32
CLMN-207ENST00000556454 SKOR2Q2VWA4 1001 aaPredicted RBP13.05□□□□□ -0.32
CLMN-207ENST00000556454 PDE4CQ08493 712 aa13.05□□□□□ -0.32
CLMN-207ENST00000556454 ABCC2Q92887 1545 aa13.05□□□□□ -0.32
CLMN-207ENST00000556454 BCAR3O75815 825 aa13.05□□□□□ -0.32
CLMN-207ENST00000556454 IBTKQ9P2D0 1353 aaPredicted RBP13.04□□□□□ -0.32
CLMN-207ENST00000556454 PTMSP20962 102 aa13.04□□□□□ -0.32
CLMN-207ENST00000556454 DMTNQ08495 405 aa13.04□□□□□ -0.32
CLMN-207ENST00000556454 HS1BP3Q53T59 392 aa13.04□□□□□ -0.32
CLMN-207ENST00000556454 MSNP26038 577 aaKnown RBP13.04□□□□□ -0.32
CLMN-207ENST00000556454 FANCD2Q9BXW9 1451 aa13.04□□□□□ -0.32
CLMN-207ENST00000556454 DYNC1I1O14576 645 aa13.03□□□□□ -0.32
CLMN-207ENST00000556454 ZNF500O60304 480 aaPredicted RBP13.03□□□□□ -0.32
CLMN-207ENST00000556454 ITSN2Q9NZM3 1697 aa13.03□□□□□ -0.32
CLMN-207ENST00000556454 PRDM15P57071 1507 aaPredicted RBP13.03□□□□□ -0.32
CLMN-207ENST00000556454 EIF4G3O43432 1585 aaKnown RBP13.03□□□□□ -0.32
CLMN-207ENST00000556454 SHROOM2Q13796 1616 aa13.03□□□□□ -0.32
CLMN-207ENST00000556454 GPRASP1Q5JY77 1395 aa13.02□□□□□ -0.32
CLMN-207ENST00000556454 NASPP49321 788 aaPredicted RBP13.02□□□□□ -0.33
CLMN-207ENST00000556454 CIZ1Q9ULV3 898 aaPredicted RBP13.02□□□□□ -0.33
CLMN-207ENST00000556454 R3HCC1Q9Y3T6 440 aaKnown RBP13.02□□□□□ -0.33
CLMN-207ENST00000556454 PDS5BQ9NTI5 1447 aa13.02□□□□□ -0.33
CLMN-207ENST00000556454 UQCRHLA0A096LP55 91 aa13.02□□□□□ -0.33
CLMN-207ENST00000556454 UQCRHP07919 91 aa13.02□□□□□ -0.33
CLMN-207ENST00000556454 PMFBP1Q8TBY8 1022 aa13.02□□□□□ -0.33
CLMN-207ENST00000556454 C22orf23Q9BZE7 217 aa13.02□□□□□ -0.33
CLMN-207ENST00000556454 DISP3Q9P2K9 1392 aa13.01□□□□□ -0.33
CLMN-207ENST00000556454 TNPO1Q92973 898 aaKnown RBP13.01□□□□□ -0.33
CLMN-207ENST00000556454 PRAG1Q86YV5 1406 aa13.01□□□□□ -0.33
CLMN-207ENST00000556454 WDR43Q15061 677 aaKnown RBP eCLIP13.01□□□□□ -0.33
CLMN-207ENST00000556454 PANK3Q9H999 370 aa13.01□□□□□ -0.33
CLMN-207ENST00000556454 SPINK5Q9NQ38 1064 aaPredicted RBP13.01□□□□□ -0.33
CLMN-207ENST00000556454 ZHX1Q9UKY1 873 aaPredicted RBP13.01□□□□□ -0.33
CLMN-207ENST00000556454 TOPBP1Q92547 1522 aa13□□□□□ -0.33
CLMN-207ENST00000556454 ZNF644Q9H582 1327 aaPredicted RBP13□□□□□ -0.33
CLMN-207ENST00000556454 GBP4Q96PP9 640 aa13□□□□□ -0.33
CLMN-207ENST00000556454 HSCBQ8IWL3 235 aa13□□□□□ -0.33
CLMN-207ENST00000556454 NOL7Q9UMY1 257 aaKnown RBP13□□□□□ -0.33
CLMN-207ENST00000556454 FAM135AQ9P2D6 1515 aa13□□□□□ -0.33
CLMN-207ENST00000556454 RAB3GAP1Q15042 981 aa12.99□□□□□ -0.33
CLMN-207ENST00000556454 SMC5Q8IY18 1101 aa12.99□□□□□ -0.33
CLMN-207ENST00000556454 PDZRN3Q9UPQ7 1066 aa12.99□□□□□ -0.33
CLMN-207ENST00000556454 ABCC10Q5T3U5 1492 aa12.99□□□□□ -0.33
CLMN-207ENST00000556454 ARHGAP31Q2M1Z3 1444 aa12.99□□□□□ -0.33
CLMN-207ENST00000556454 E9PSI1 815 aa12.99□□□□□ -0.33
CLMN-207ENST00000556454 ZSCAN20P17040 1043 aaPredicted RBP12.99□□□□□ -0.33
CLMN-207ENST00000556454 TESK2Q96S53 571 aa12.99□□□□□ -0.33
CLMN-207ENST00000556454 PIK3C2GO75747 1445 aa12.98□□□□□ -0.33
CLMN-207ENST00000556454 PPP2R1AP30153 589 aa12.98□□□□□ -0.33
CLMN-207ENST00000556454 SNX21Q969T3 373 aa12.98□□□□□ -0.33
CLMN-207ENST00000556454 CCDC94Q9BW85 323 aaPredicted RBP12.98□□□□□ -0.33
CLMN-207ENST00000556454 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.98□□□□□ -0.33
CLMN-207ENST00000556454 ANP32BQ92688 251 aaKnown RBP12.98□□□□□ -0.33
CLMN-207ENST00000556454 COG6Q9Y2V7 657 aa12.98□□□□□ -0.33
CLMN-207ENST00000556454 ERBINQ96RT1 1412 aa12.98□□□□□ -0.33
CLMN-207ENST00000556454 KDM2AQ9Y2K7 1162 aa12.97□□□□□ -0.33
CLMN-207ENST00000556454 NCLP19338 710 aaKnown RBP12.97□□□□□ -0.33
CLMN-207ENST00000556454 PANK1Q8TE04 598 aa12.97□□□□□ -0.33
CLMN-207ENST00000556454 PDLIM2Q96JY6 352 aa12.96□□□□□ -0.33
CLMN-207ENST00000556454 PRDM10Q9NQV6 1147 aa12.96□□□□□ -0.33
CLMN-207ENST00000556454 PCDHB15Q9Y5E8 787 aa12.96□□□□□ -0.33
CLMN-207ENST00000556454 GTF2E1P29083 439 aaPredicted RBP12.96□□□□□ -0.34
CLMN-207ENST00000556454 CSPP1Q1MSJ5 1256 aa12.96□□□□□ -0.34
CLMN-207ENST00000556454 ANKRD50Q9ULJ7 1429 aa12.95□□□□□ -0.34
CLMN-207ENST00000556454 MAGI2Q86UL8 1455 aa12.95□□□□□ -0.34
CLMN-207ENST00000556454 WDR7Q9Y4E6 1490 aa12.94□□□□□ -0.34
CLMN-207ENST00000556454 SASS6Q6UVJ0 657 aa12.94□□□□□ -0.34
CLMN-207ENST00000556454 CLEC17AQ6ZS10 378 aa12.94□□□□□ -0.34
CLMN-207ENST00000556454 PTPRGP23470 1445 aa12.94□□□□□ -0.34
CLMN-207ENST00000556454 MCM5P33992 734 aa12.94□□□□□ -0.34
CLMN-207ENST00000556454 MFAP1P55081 439 aaKnown RBP12.94□□□□□ -0.34
CLMN-207ENST00000556454 ZNF445P59923 1031 aa12.94□□□□□ -0.34
CLMN-207ENST00000556454 XPCQ01831 940 aaPredicted RBP12.94□□□□□ -0.34
CLMN-207ENST00000556454 KLHL40Q2TBA0 621 aa12.94□□□□□ -0.34
CLMN-207ENST00000556454 NGEFQ8N5V2 710 aa12.94□□□□□ -0.34
CLMN-207ENST00000556454 BBXQ8WY36 941 aaPredicted RBP12.94□□□□□ -0.34
CLMN-207ENST00000556454 GTPBP4Q9BZE4 634 aaKnown RBP12.94□□□□□ -0.34
CLMN-207ENST00000556454 KIF20AO95235 890 aa12.93□□□□□ -0.34
CLMN-207ENST00000556454 RBM25P49756 843 aaKnown RBP12.93□□□□□ -0.34
CLMN-207ENST00000556454 EIF2AK4Q9P2K8 1649 aaKnown RBP12.93□□□□□ -0.34
CLMN-207ENST00000556454 URB2Q14146 1524 aaKnown RBP12.93□□□□□ -0.34
CLMN-207ENST00000556454 STAC3Q96MF2 364 aa12.93□□□□□ -0.34
CLMN-207ENST00000556454 ZKSCAN5Q9Y2L8 839 aa12.93□□□□□ -0.34
CLMN-207ENST00000556454 MRC2Q9UBG0 1479 aa12.92□□□□□ -0.34
CLMN-207ENST00000556454 RWDD1Q9H446 243 aaPredicted RBP12.92□□□□□ -0.34
CLMN-207ENST00000556454 SYNMO15061 1565 aa12.91□□□□□ -0.34
CLMN-207ENST00000556454 IQGAP2Q13576 1575 aa12.91□□□□□ -0.34
CLMN-207ENST00000556454 NUP155O75694 1391 aa12.91□□□□□ -0.34
CLMN-207ENST00000556454 RNF17Q9BXT8 1623 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms