RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 DAPK1P53355 1430 aa16.84■□□□□ 0.29
CHGA-205ENST00000556098 KCNA6P17658 529 aa16.83■□□□□ 0.28
CHGA-205ENST00000556098 IDI1Q13907 227 aa16.83■□□□□ 0.28
CHGA-205ENST00000556098 MEX3CQ5U5Q3 659 aaKnown RBP16.82■□□□□ 0.28
CHGA-205ENST00000556098 C14orf37Q86TY3 774 aa16.82■□□□□ 0.28
CHGA-205ENST00000556098 NKTRP30414 1462 aaKnown RBP16.81■□□□□ 0.28
CHGA-205ENST00000556098 PPP1R15AO75807 674 aaPredicted RBP16.81■□□□□ 0.28
CHGA-205ENST00000556098 COL16A1Q07092 1604 aaPredicted RBP16.81■□□□□ 0.28
CHGA-205ENST00000556098 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.79■□□□□ 0.28
CHGA-205ENST00000556098 ANKRD30AQ9BXX3 1397 aa16.78■□□□□ 0.28
CHGA-205ENST00000556098 CHGAP10645 457 aaKnown RBP16.78■□□□□ 0.28
CHGA-205ENST00000556098 TRIM52Q96A61 297 aa16.78■□□□□ 0.28
CHGA-205ENST00000556098 LMTK2Q8IWU2 1503 aa16.78■□□□□ 0.28
CHGA-205ENST00000556098 JCADQ9P266 1359 aa16.77■□□□□ 0.28
CHGA-205ENST00000556098 SHPRHQ149N8 1683 aa16.77■□□□□ 0.28
CHGA-205ENST00000556098 SLAIN2Q9P270 581 aa16.76■□□□□ 0.27
CHGA-205ENST00000556098 TMEM131LA2VDJ0 1609 aa16.75■□□□□ 0.27
CHGA-205ENST00000556098 NUTM2DQ5VT03 806 aaPredicted RBP16.75■□□□□ 0.27
CHGA-205ENST00000556098 FGD6Q6ZV73 1430 aa16.75■□□□□ 0.27
CHGA-205ENST00000556098 LRP6O75581 1613 aa16.74■□□□□ 0.27
CHGA-205ENST00000556098 NOS1P29475 1434 aa16.73■□□□□ 0.27
CHGA-205ENST00000556098 RIMS2Q9UQ26 1411 aa16.73■□□□□ 0.27
CHGA-205ENST00000556098 E9PCH4 1651 aa16.72■□□□□ 0.27
CHGA-205ENST00000556098 NUTM2BA6NNL0 878 aaPredicted RBP16.71■□□□□ 0.27
CHGA-205ENST00000556098 NUTM2EB1AL46 878 aaPredicted RBP16.71■□□□□ 0.27
CHGA-205ENST00000556098 FAM50AQ14320 339 aaKnown RBP16.71■□□□□ 0.27
CHGA-205ENST00000556098 NUTM2AQ8IVF1 878 aaPredicted RBP16.71■□□□□ 0.27
CHGA-205ENST00000556098 PLEKHG1Q9ULL1 1385 aa16.7■□□□□ 0.26
CHGA-205ENST00000556098 ZFYVE9O95405 1425 aa16.69■□□□□ 0.26
CHGA-205ENST00000556098 AHDC1Q5TGY3 1603 aaPredicted RBP16.68■□□□□ 0.26
CHGA-205ENST00000556098 ATF3P18847 181 aa16.68■□□□□ 0.26
CHGA-205ENST00000556098 SLC52A1Q9NWF4 448 aa16.68■□□□□ 0.26
CHGA-205ENST00000556098 UNC13BO14795 1591 aa16.66■□□□□ 0.26
CHGA-205ENST00000556098 HDGFP51858 240 aaKnown RBP16.66■□□□□ 0.26
CHGA-205ENST00000556098 DIP2AQ14689 1571 aa16.66■□□□□ 0.26
CHGA-205ENST00000556098 ZNF772Q68DY9 489 aaPredicted RBP16.66■□□□□ 0.26
CHGA-205ENST00000556098 RRBP1Q9P2E9 1410 aaKnown RBP16.66■□□□□ 0.26
CHGA-205ENST00000556098 RPRD2Q5VT52 1461 aaKnown RBP16.66■□□□□ 0.26
CHGA-205ENST00000556098 TRPM2O94759 1503 aa16.65■□□□□ 0.26
CHGA-205ENST00000556098 UPF1Q92900 1129 aaKnown RBP eCLIP16.65■□□□□ 0.26
CHGA-205ENST00000556098 SPATA31A6Q5VVP1 1343 aa16.65■□□□□ 0.26
CHGA-205ENST00000556098 ANKRD50Q9ULJ7 1429 aa16.64■□□□□ 0.25
CHGA-205ENST00000556098 ADGRL2O95490 1459 aa16.64■□□□□ 0.25
CHGA-205ENST00000556098 NHSL1Q5SYE7 1610 aa16.63■□□□□ 0.25
CHGA-205ENST00000556098 RXRBP28702 533 aa16.62■□□□□ 0.25
CHGA-205ENST00000556098 CADPS2Q86UW7 1296 aa16.62■□□□□ 0.25
CHGA-205ENST00000556098 SPHKAPQ2M3C7 1700 aa16.62■□□□□ 0.25
CHGA-205ENST00000556098 PPARGC1BQ86YN6 1023 aaKnown RBP16.61■□□□□ 0.25
CHGA-205ENST00000556098 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.61■□□□□ 0.25
CHGA-205ENST00000556098 IQGAP3Q86VI3 1631 aa16.6■□□□□ 0.25
CHGA-205ENST00000556098 TBX22Q9Y458 520 aa16.6■□□□□ 0.25
CHGA-205ENST00000556098 ADAMTS13Q76LX8 1427 aa16.6■□□□□ 0.25
CHGA-205ENST00000556098 ASXL1Q8IXJ9 1541 aa16.6■□□□□ 0.25
CHGA-205ENST00000556098 NALCNQ8IZF0 1738 aa16.59■□□□□ 0.25
CHGA-205ENST00000556098 C19orf44Q9H6X5 657 aa16.58■□□□□ 0.24
CHGA-205ENST00000556098 AFF2P51816 1311 aa16.58■□□□□ 0.24
CHGA-205ENST00000556098 XRN1Q8IZH2 1706 aaKnown RBP16.58■□□□□ 0.24
CHGA-205ENST00000556098 NRXN3Q9Y4C0 1643 aa16.57■□□□□ 0.24
CHGA-205ENST00000556098 NCOA3Q9Y6Q9 1424 aa16.57■□□□□ 0.24
CHGA-205ENST00000556098 BRINP3Q76B58 766 aa16.57■□□□□ 0.24
CHGA-205ENST00000556098 C8orf37Q96NL8 207 aa16.57■□□□□ 0.24
CHGA-205ENST00000556098 AMOTL2Q9Y2J4 779 aa16.57■□□□□ 0.24
CHGA-205ENST00000556098 KIF1BO60333 1816 aa16.56■□□□□ 0.24
CHGA-205ENST00000556098 PTPRUQ92729 1446 aa16.55■□□□□ 0.24
CHGA-205ENST00000556098 ITGAEP38570 1179 aa16.54■□□□□ 0.24
CHGA-205ENST00000556098 ZNF326Q5BKZ1 582 aaKnown RBP16.54■□□□□ 0.24
CHGA-205ENST00000556098 DDX17Q92841 729 aaKnown RBP16.54■□□□□ 0.24
CHGA-205ENST00000556098 PIK3R4Q99570 1358 aa16.52■□□□□ 0.24
CHGA-205ENST00000556098 ZEB1P37275 1124 aaPredicted RBP16.52■□□□□ 0.24
CHGA-205ENST00000556098 RGS12O14924 1447 aa16.52■□□□□ 0.23
CHGA-205ENST00000556098 HRCP23327 699 aa16.51■□□□□ 0.23
CHGA-205ENST00000556098 CDK12Q9NYV4 1490 aaPredicted RBP16.5■□□□□ 0.23
CHGA-205ENST00000556098 ADAMTS2O95450 1211 aa16.5■□□□□ 0.23
CHGA-205ENST00000556098 MST1RQ04912 1400 aa16.5■□□□□ 0.23
CHGA-205ENST00000556098 QTRT2Q9H974 415 aaKnown RBP16.49■□□□□ 0.23
CHGA-205ENST00000556098 SETBP1Q9Y6X0 1596 aa16.49■□□□□ 0.23
CHGA-205ENST00000556098 NUP155O75694 1391 aa16.49■□□□□ 0.23
CHGA-205ENST00000556098 MARF1Q9Y4F3 1742 aaKnown RBP16.48■□□□□ 0.23
CHGA-205ENST00000556098 DCCP43146 1447 aa16.48■□□□□ 0.23
CHGA-205ENST00000556098 SETD5Q9C0A6 1442 aa16.47■□□□□ 0.23
CHGA-205ENST00000556098 LRRC59Q96AG4 307 aaKnown RBP16.47■□□□□ 0.23
CHGA-205ENST00000556098 CLTCL1P53675 1640 aa16.47■□□□□ 0.23
CHGA-205ENST00000556098 NGLY1Q96IV0 654 aa16.46■□□□□ 0.23
CHGA-205ENST00000556098 PNPLA6Q8IY17 1366 aa16.46■□□□□ 0.23
CHGA-205ENST00000556098 RBM6P78332 1123 aaKnown RBP16.45■□□□□ 0.22
CHGA-205ENST00000556098 METP08581 1390 aa16.44■□□□□ 0.22
CHGA-205ENST00000556098 ADGRL3Q9HAR2 1447 aa16.44■□□□□ 0.22
CHGA-205ENST00000556098 NEXMIFQ5QGS0 1516 aa16.42■□□□□ 0.22
CHGA-205ENST00000556098 ATAD2Q6PL18 1390 aa16.4■□□□□ 0.22
CHGA-205ENST00000556098 USP21Q9UK80 565 aa16.4■□□□□ 0.22
CHGA-205ENST00000556098 ROCK1Q13464 1354 aa16.38■□□□□ 0.21
CHGA-205ENST00000556098 C1orf167Q5SNV9 1468 aa16.38■□□□□ 0.21
CHGA-205ENST00000556098 PPLO60437 1756 aa16.38■□□□□ 0.21
CHGA-205ENST00000556098 BRWD3Q6RI45 1802 aa16.38■□□□□ 0.21
CHGA-205ENST00000556098 LAMC1P11047 1609 aa16.37■□□□□ 0.21
CHGA-205ENST00000556098 COL22A1Q8NFW1 1626 aaPredicted RBP16.37■□□□□ 0.21
CHGA-205ENST00000556098 ORAI2Q96SN7 254 aa16.36■□□□□ 0.21
CHGA-205ENST00000556098 TRPC5Q9UL62 973 aaPredicted RBP16.35■□□□□ 0.21
CHGA-205ENST00000556098 RGPD8O14715 1765 aaPredicted RBP16.33■□□□□ 0.21
CHGA-205ENST00000556098 ZRANB1Q9UGI0 708 aa16.33■□□□□ 0.2
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