RNA–Protein interactions for RNA: ENST00000555955.3

SIX1-205, Transcript of SIX homeobox 1, humanhuman

TSL 2

Gene SIX1, Length 2,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-205ENST00000555955 ST20-MTHFSA0A0A6YYL1 179 aa18.44■□□□□ 0.54
SIX1-205ENST00000555955 EIF3AQ14152 1382 aaKnown RBP18.44■□□□□ 0.54
SIX1-205ENST00000555955 VGLL3A8MV65 326 aa18.42■□□□□ 0.54
SIX1-205ENST00000555955 PAXIP1Q6ZW49 1069 aaPredicted RBP18.42■□□□□ 0.54
SIX1-205ENST00000555955 SUPT6HQ7KZ85 1726 aaKnown RBP18.42■□□□□ 0.54
SIX1-205ENST00000555955 NASPP49321 788 aaPredicted RBP18.42■□□□□ 0.54
SIX1-205ENST00000555955 INSRP06213 1382 aa18.42■□□□□ 0.54
SIX1-205ENST00000555955 ZSCAN20P17040 1043 aaPredicted RBP18.41■□□□□ 0.54
SIX1-205ENST00000555955 PLCD3Q8N3E9 789 aa18.41■□□□□ 0.54
SIX1-205ENST00000555955 MBD5Q9P267 1494 aa18.41■□□□□ 0.54
SIX1-205ENST00000555955 DYNC1I1O14576 645 aa18.4■□□□□ 0.54
SIX1-205ENST00000555955 TNNT2P45379 298 aaPredicted RBP18.4■□□□□ 0.54
SIX1-205ENST00000555955 TAF7LQ5H9L4 462 aa18.4■□□□□ 0.54
SIX1-205ENST00000555955 CC2D1BQ5T0F9 858 aaKnown RBP18.39■□□□□ 0.53
SIX1-205ENST00000555955 GOLGA2Q08379 1002 aa18.39■□□□□ 0.53
SIX1-205ENST00000555955 AMER1Q5JTC6 1135 aaPredicted RBP18.39■□□□□ 0.53
SIX1-205ENST00000555955 PPP4R3BQ5MIZ7 849 aa18.38■□□□□ 0.53
SIX1-205ENST00000555955 ADAMTS8Q9UP79 889 aa18.38■□□□□ 0.53
SIX1-205ENST00000555955 CCDC94Q9BW85 323 aaPredicted RBP18.37■□□□□ 0.53
SIX1-205ENST00000555955 KIF14Q15058 1648 aa18.37■□□□□ 0.53
SIX1-205ENST00000555955 FBLN2P98095 1184 aa18.37■□□□□ 0.53
SIX1-205ENST00000555955 XPCQ01831 940 aaPredicted RBP18.37■□□□□ 0.53
SIX1-205ENST00000555955 SKOR2Q2VWA4 1001 aaPredicted RBP18.37■□□□□ 0.53
SIX1-205ENST00000555955 PLEKHH1Q9ULM0 1364 aa18.37■□□□□ 0.53
SIX1-205ENST00000555955 TCOF1Q13428 1488 aaKnown RBP18.36■□□□□ 0.53
SIX1-205ENST00000555955 BCAR3O75815 825 aa18.36■□□□□ 0.53
SIX1-205ENST00000555955 CARMIL2Q6F5E8 1435 aa18.36■□□□□ 0.53
SIX1-205ENST00000555955 ZNF692Q9BU19 519 aaPredicted RBP18.36■□□□□ 0.53
SIX1-205ENST00000555955 LRRIQ1Q96JM4 1722 aa18.35■□□□□ 0.53
SIX1-205ENST00000555955 PER1O15534 1290 aaPredicted RBP18.35■□□□□ 0.53
SIX1-205ENST00000555955 TNPO1Q92973 898 aaKnown RBP18.35■□□□□ 0.53
SIX1-205ENST00000555955 GBP4Q96PP9 640 aa18.34■□□□□ 0.53
SIX1-205ENST00000555955 TMEM51Q9NW97 253 aa18.34■□□□□ 0.53
SIX1-205ENST00000555955 ZNF500O60304 480 aaPredicted RBP18.34■□□□□ 0.53
SIX1-205ENST00000555955 CLUAP1Q96AJ1 413 aa18.34■□□□□ 0.53
SIX1-205ENST00000555955 E9PCH4 1651 aa18.34■□□□□ 0.53
SIX1-205ENST00000555955 EHBP1L1Q8N3D4 1523 aa18.33■□□□□ 0.53
SIX1-205ENST00000555955 HSCBQ8IWL3 235 aa18.33■□□□□ 0.53
SIX1-205ENST00000555955 IPO4Q8TEX9 1081 aaKnown RBP18.33■□□□□ 0.53
SIX1-205ENST00000555955 C22orf23Q9BZE7 217 aa18.33■□□□□ 0.53
SIX1-205ENST00000555955 CGNL1Q0VF96 1302 aa18.33■□□□□ 0.52
SIX1-205ENST00000555955 NOL7Q9UMY1 257 aaKnown RBP18.32■□□□□ 0.52
SIX1-205ENST00000555955 JPH4Q96JJ6 628 aa18.31■□□□□ 0.52
SIX1-205ENST00000555955 ZNF830Q96NB3 372 aaPredicted RBP18.31■□□□□ 0.52
SIX1-205ENST00000555955 RAPGEF6Q8TEU7 1601 aa18.31■□□□□ 0.52
SIX1-205ENST00000555955 KIF20AO95235 890 aa18.31■□□□□ 0.52
SIX1-205ENST00000555955 SLFN5Q08AF3 891 aa18.31■□□□□ 0.52
SIX1-205ENST00000555955 HS1BP3Q53T59 392 aa18.31■□□□□ 0.52
SIX1-205ENST00000555955 PRG4Q92954 1404 aaPredicted RBP18.31■□□□□ 0.52
SIX1-205ENST00000555955 ABCA8O94911 1581 aa18.3■□□□□ 0.52
SIX1-205ENST00000555955 ZNF521Q96K83 1311 aa18.3■□□□□ 0.52
SIX1-205ENST00000555955 RALGAPBQ86X10 1494 aa18.3■□□□□ 0.52
SIX1-205ENST00000555955 CSPP1Q1MSJ5 1256 aa18.3■□□□□ 0.52
SIX1-205ENST00000555955 GTPBP4Q9BZE4 634 aaKnown RBP18.3■□□□□ 0.52
SIX1-205ENST00000555955 COG6Q9Y2V7 657 aa18.29■□□□□ 0.52
SIX1-205ENST00000555955 MFAP1P55081 439 aaKnown RBP18.29■□□□□ 0.52
SIX1-205ENST00000555955 SASS6Q6UVJ0 657 aa18.28■□□□□ 0.52
SIX1-205ENST00000555955 ARHGEF11O15085 1522 aa18.28■□□□□ 0.52
SIX1-205ENST00000555955 ZBTB7CA1YPR0 619 aa18.28■□□□□ 0.52
SIX1-205ENST00000555955 PTMSP20962 102 aa18.28■□□□□ 0.52
SIX1-205ENST00000555955 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.28■□□□□ 0.52
SIX1-205ENST00000555955 ERCC6L2Q5T890 1561 aa18.28■□□□□ 0.52
SIX1-205ENST00000555955 ZBTB22O15209 634 aa18.27■□□□□ 0.52
SIX1-205ENST00000555955 DDIT3P35638 169 aa18.27■□□□□ 0.52
SIX1-205ENST00000555955 CBX1P83916 185 aa18.27■□□□□ 0.52
SIX1-205ENST00000555955 MAPK8IP2Q13387 824 aaPredicted RBP18.27■□□□□ 0.52
SIX1-205ENST00000555955 WDR43Q15061 677 aaKnown RBP eCLIP18.27■□□□□ 0.52
SIX1-205ENST00000555955 PDE3AQ14432 1141 aa18.27■□□□□ 0.51
SIX1-205ENST00000555955 PANK1Q8TE04 598 aa18.27■□□□□ 0.51
SIX1-205ENST00000555955 PDZRN3Q9UPQ7 1066 aa18.27■□□□□ 0.51
SIX1-205ENST00000555955 KDM2AQ9Y2K7 1162 aa18.27■□□□□ 0.51
SIX1-205ENST00000555955 LETM1O95202 739 aaPredicted RBP18.26■□□□□ 0.51
SIX1-205ENST00000555955 JARID2Q92833 1246 aaPredicted RBP18.26■□□□□ 0.51
SIX1-205ENST00000555955 UHRF1BP1Q6BDS2 1440 aa18.25■□□□□ 0.51
SIX1-205ENST00000555955 PMFBP1Q8TBY8 1022 aa18.24■□□□□ 0.51
SIX1-205ENST00000555955 ZMYM3Q14202 1370 aa18.24■□□□□ 0.51
SIX1-205ENST00000555955 RAB3GAP1Q15042 981 aa18.24■□□□□ 0.51
SIX1-205ENST00000555955 SPINK5Q9NQ38 1064 aaPredicted RBP18.24■□□□□ 0.51
SIX1-205ENST00000555955 RTEL1-TNFRSF6BF6WH68 1400 aa18.24■□□□□ 0.51
SIX1-205ENST00000555955 TRMT2AQ8IZ69 625 aaKnown RBP18.23■□□□□ 0.51
SIX1-205ENST00000555955 ZKSCAN5Q9Y2L8 839 aa18.23■□□□□ 0.51
SIX1-205ENST00000555955 ROCK1Q13464 1354 aa18.23■□□□□ 0.51
SIX1-205ENST00000555955 CIZ1Q9ULV3 898 aaPredicted RBP18.23■□□□□ 0.51
SIX1-205ENST00000555955 NKTRP30414 1462 aaKnown RBP18.23■□□□□ 0.51
SIX1-205ENST00000555955 MAGI3Q5TCQ9 1506 aa18.23■□□□□ 0.51
SIX1-205ENST00000555955 OSCARQ8IYS5 282 aa18.22■□□□□ 0.51
SIX1-205ENST00000555955 NCOA3Q9Y6Q9 1424 aa18.22■□□□□ 0.51
SIX1-205ENST00000555955 IGSF3O75054 1194 aa18.22■□□□□ 0.51
SIX1-205ENST00000555955 TSC1Q92574 1164 aa18.22■□□□□ 0.51
SIX1-205ENST00000555955 DDX49Q9Y6V7 483 aaKnown RBP18.22■□□□□ 0.51
SIX1-205ENST00000555955 PANK3Q9H999 370 aa18.22■□□□□ 0.51
SIX1-205ENST00000555955 PZPP20742 1482 aa18.22■□□□□ 0.51
SIX1-205ENST00000555955 PKD2Q13563 968 aa18.21■□□□□ 0.51
SIX1-205ENST00000555955 SMC5Q8IY18 1101 aa18.21■□□□□ 0.51
SIX1-205ENST00000555955 IBTKQ9P2D0 1353 aaPredicted RBP18.2■□□□□ 0.5
SIX1-205ENST00000555955 KIAA1107Q9UPP5 1409 aa18.2■□□□□ 0.5
SIX1-205ENST00000555955 GOLGA6L22H0YM25 854 aa18.2■□□□□ 0.5
SIX1-205ENST00000555955 HSP90AB1P08238 724 aaKnown RBP18.2■□□□□ 0.5
SIX1-205ENST00000555955 PDLIM2Q96JY6 352 aa18.2■□□□□ 0.5
SIX1-205ENST00000555955 PCDHB15Q9Y5E8 787 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms