RNA–Protein interactions for RNA: ENST00000555914.5

HNRNPC-222, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

APPRIS ALT1 TSL 5 BASIC

Gene HNRNPC, Length 1,658 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-222	ENST00000555914	MYO5B	Q9ULV0	1848 aa		13.65	□□□□□ -0.22
HNRNPC-222	ENST00000555914	MED1	Q15648	1581 aa	Predicted RBP	13.64	□□□□□ -0.23
HNRNPC-222	ENST00000555914	ITGAE	P38570	1179 aa		13.64	□□□□□ -0.23
HNRNPC-222	ENST00000555914	RPRD2	Q5VT52	1461 aa	Known RBP	13.63	□□□□□ -0.23
HNRNPC-222	ENST00000555914	UNC13B	O14795	1591 aa		13.63	□□□□□ -0.23
HNRNPC-222	ENST00000555914	ZEB1	P37275	1124 aa	Predicted RBP	13.63	□□□□□ -0.23
HNRNPC-222	ENST00000555914	GCC2	Q8IWJ2	1684 aa		13.62	□□□□□ -0.23
HNRNPC-222	ENST00000555914	TMEM94	Q12767	1356 aa		13.62	□□□□□ -0.23
HNRNPC-222	ENST00000555914		E9PCH4	1651 aa		13.61	□□□□□ -0.23
HNRNPC-222	ENST00000555914	KCNA6	P17658	529 aa		13.61	□□□□□ -0.23
HNRNPC-222	ENST00000555914	ROCK1	Q13464	1354 aa		13.61	□□□□□ -0.23
HNRNPC-222	ENST00000555914	ZFYVE9	O95405	1425 aa		13.61	□□□□□ -0.23
HNRNPC-222	ENST00000555914	TMEM131L	A2VDJ0	1609 aa		13.6	□□□□□ -0.23
HNRNPC-222	ENST00000555914	BCAN	Q96GW7	911 aa		13.59	□□□□□ -0.23
HNRNPC-222	ENST00000555914	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.59	□□□□□ -0.23
HNRNPC-222	ENST00000555914	RIMS2	Q9UQ26	1411 aa		13.58	□□□□□ -0.24
HNRNPC-222	ENST00000555914	CHGA	P10645	457 aa	Known RBP	13.58	□□□□□ -0.24
HNRNPC-222	ENST00000555914	PROSER2	Q86WR7	435 aa	Predicted RBP	13.58	□□□□□ -0.24
HNRNPC-222	ENST00000555914	IQGAP3	Q86VI3	1631 aa		13.58	□□□□□ -0.24
HNRNPC-222	ENST00000555914	NUP155	O75694	1391 aa		13.57	□□□□□ -0.24
HNRNPC-222	ENST00000555914	NWD1	Q149M9	1564 aa		13.56	□□□□□ -0.24
HNRNPC-222	ENST00000555914	PLEKHG1	Q9ULL1	1385 aa		13.56	□□□□□ -0.24
HNRNPC-222	ENST00000555914	PPP1R15A	O75807	674 aa	Predicted RBP	13.56	□□□□□ -0.24
HNRNPC-222	ENST00000555914	CHD2	O14647	1828 aa	Known RBP	13.55	□□□□□ -0.24
HNRNPC-222	ENST00000555914	FAM135B	Q49AJ0	1406 aa		13.54	□□□□□ -0.24
HNRNPC-222	ENST00000555914	NKTR	P30414	1462 aa	Known RBP	13.53	□□□□□ -0.24
HNRNPC-222	ENST00000555914	ROBO1	Q9Y6N7	1651 aa		13.53	□□□□□ -0.24
HNRNPC-222	ENST00000555914	ADAMTS13	Q76LX8	1427 aa		13.53	□□□□□ -0.24
HNRNPC-222	ENST00000555914	HDGF	P51858	240 aa	Known RBP	13.51	□□□□□ -0.25
HNRNPC-222	ENST00000555914	TBX22	Q9Y458	520 aa		13.51	□□□□□ -0.25
HNRNPC-222	ENST00000555914	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.5	□□□□□ -0.25
HNRNPC-222	ENST00000555914	RGS17	Q9UGC6	210 aa	Predicted RBP	13.5	□□□□□ -0.25
HNRNPC-222	ENST00000555914	MSH6	P52701	1360 aa		13.5	□□□□□ -0.25
HNRNPC-222	ENST00000555914	SLAIN2	Q9P270	581 aa		13.49	□□□□□ -0.25
HNRNPC-222	ENST00000555914	RRBP1	Q9P2E9	1410 aa	Known RBP	13.49	□□□□□ -0.25
HNRNPC-222	ENST00000555914	SPHKAP	Q2M3C7	1700 aa		13.48	□□□□□ -0.25
HNRNPC-222	ENST00000555914	PTPRU	Q92729	1446 aa		13.47	□□□□□ -0.25
HNRNPC-222	ENST00000555914	NAIP	Q13075	1403 aa		13.46	□□□□□ -0.25
HNRNPC-222	ENST00000555914	NRXN3	Q9Y4C0	1643 aa		13.46	□□□□□ -0.26
HNRNPC-222	ENST00000555914	DIP2A	Q14689	1571 aa		13.45	□□□□□ -0.26
HNRNPC-222	ENST00000555914	AMOTL2	Q9Y2J4	779 aa		13.45	□□□□□ -0.26
HNRNPC-222	ENST00000555914	ZNF326	Q5BKZ1	582 aa	Known RBP	13.44	□□□□□ -0.26
HNRNPC-222	ENST00000555914	CLTCL1	P53675	1640 aa		13.44	□□□□□ -0.26
HNRNPC-222	ENST00000555914	PHLPP1	O60346	1717 aa		13.44	□□□□□ -0.26
HNRNPC-222	ENST00000555914	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.44	□□□□□ -0.26
HNRNPC-222	ENST00000555914	C14orf37	Q86TY3	774 aa		13.44	□□□□□ -0.26
HNRNPC-222	ENST00000555914	PIK3R4	Q99570	1358 aa		13.43	□□□□□ -0.26
HNRNPC-222	ENST00000555914	TRPM2	O94759	1503 aa		13.43	□□□□□ -0.26
HNRNPC-222	ENST00000555914	NCOA3	Q9Y6Q9	1424 aa		13.42	□□□□□ -0.26
HNRNPC-222	ENST00000555914	C19orf44	Q9H6X5	657 aa		13.42	□□□□□ -0.26
HNRNPC-222	ENST00000555914	MET	P08581	1390 aa		13.42	□□□□□ -0.26
HNRNPC-222	ENST00000555914	POTEA	Q6S8J7	498 aa		13.41	□□□□□ -0.26
HNRNPC-222	ENST00000555914	SETBP1	Q9Y6X0	1596 aa		13.41	□□□□□ -0.26
HNRNPC-222	ENST00000555914	NEXMIF	Q5QGS0	1516 aa		13.4	□□□□□ -0.26
HNRNPC-222	ENST00000555914	COL16A1	Q07092	1604 aa	Predicted RBP	13.4	□□□□□ -0.26
HNRNPC-222	ENST00000555914	XRN1	Q8IZH2	1706 aa	Known RBP	13.4	□□□□□ -0.26
HNRNPC-222	ENST00000555914	HFM1	A2PYH4	1435 aa		13.39	□□□□□ -0.27
HNRNPC-222	ENST00000555914	ATF3	P18847	181 aa		13.39	□□□□□ -0.27
HNRNPC-222	ENST00000555914	CADPS2	Q86UW7	1296 aa		13.39	□□□□□ -0.27
HNRNPC-222	ENST00000555914	TRIM52	Q96A61	297 aa		13.39	□□□□□ -0.27
HNRNPC-222	ENST00000555914	JCAD	Q9P266	1359 aa		13.38	□□□□□ -0.27
HNRNPC-222	ENST00000555914	KIF1B	O60333	1816 aa		13.37	□□□□□ -0.27
HNRNPC-222	ENST00000555914	BRINP3	Q76B58	766 aa		13.37	□□□□□ -0.27
HNRNPC-222	ENST00000555914	FOXD1	Q16676	465 aa		13.36	□□□□□ -0.27
HNRNPC-222	ENST00000555914	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.36	□□□□□ -0.27
HNRNPC-222	ENST00000555914	LRP6	O75581	1613 aa		13.35	□□□□□ -0.27
HNRNPC-222	ENST00000555914	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.35	□□□□□ -0.27
HNRNPC-222	ENST00000555914	MST1R	Q04912	1400 aa		13.34	□□□□□ -0.27
HNRNPC-222	ENST00000555914	DCC	P43146	1447 aa		13.33	□□□□□ -0.28
HNRNPC-222	ENST00000555914	DDX17	Q92841	729 aa	Known RBP	13.33	□□□□□ -0.28
HNRNPC-222	ENST00000555914	SETD1A	O15047	1707 aa	Known RBP	13.32	□□□□□ -0.28
HNRNPC-222	ENST00000555914	NALCN	Q8IZF0	1738 aa		13.32	□□□□□ -0.28
HNRNPC-222	ENST00000555914	ASXL1	Q8IXJ9	1541 aa		13.31	□□□□□ -0.28
HNRNPC-222	ENST00000555914	ADGRL3	Q9HAR2	1447 aa		13.31	□□□□□ -0.28
HNRNPC-222	ENST00000555914	VGF	O15240	615 aa	Predicted RBP	13.31	□□□□□ -0.28
HNRNPC-222	ENST00000555914	SHPRH	Q149N8	1683 aa		13.3	□□□□□ -0.28
HNRNPC-222	ENST00000555914	SPATA31A6	Q5VVP1	1343 aa		13.3	□□□□□ -0.28
HNRNPC-222	ENST00000555914	ROBO2	Q9HCK4	1378 aa		13.3	□□□□□ -0.28
HNRNPC-222	ENST00000555914	PPL	O60437	1756 aa		13.29	□□□□□ -0.28
HNRNPC-222	ENST00000555914	NHSL1	Q5SYE7	1610 aa		13.28	□□□□□ -0.28
HNRNPC-222	ENST00000555914	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.28	□□□□□ -0.28
HNRNPC-222	ENST00000555914	NUTM2E	B1AL46	878 aa	Predicted RBP	13.28	□□□□□ -0.28
HNRNPC-222	ENST00000555914	MEX3C	Q5U5Q3	659 aa	Known RBP	13.28	□□□□□ -0.28
HNRNPC-222	ENST00000555914	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.28	□□□□□ -0.28
HNRNPC-222	ENST00000555914	RPGRIP1L	Q68CZ1	1315 aa		13.27	□□□□□ -0.28
HNRNPC-222	ENST00000555914	PTCH1	Q13635	1447 aa		13.27	□□□□□ -0.29
HNRNPC-222	ENST00000555914	SETD5	Q9C0A6	1442 aa		13.27	□□□□□ -0.29
HNRNPC-222	ENST00000555914	ADGRF5	Q8IZF2	1346 aa		13.27	□□□□□ -0.29
HNRNPC-222	ENST00000555914	RGL3	Q3MIN7	710 aa		13.26	□□□□□ -0.29
HNRNPC-222	ENST00000555914	MPHOSPH9	Q99550	1183 aa		13.26	□□□□□ -0.29
HNRNPC-222	ENST00000555914	C1orf167	Q5SNV9	1468 aa		13.26	□□□□□ -0.29
HNRNPC-222	ENST00000555914	ORAI2	Q96SN7	254 aa		13.25	□□□□□ -0.29
HNRNPC-222	ENST00000555914	CCDC144A	A2RUR9	1427 aa		13.24	□□□□□ -0.29
HNRNPC-222	ENST00000555914	LRRC59	Q96AG4	307 aa	Known RBP	13.24	□□□□□ -0.29
HNRNPC-222	ENST00000555914	SPATA31E1	Q6ZUB1	1445 aa		13.23	□□□□□ -0.29
HNRNPC-222	ENST00000555914	ZNF772	Q68DY9	489 aa	Predicted RBP	13.23	□□□□□ -0.29
HNRNPC-222	ENST00000555914	PRAG1	Q86YV5	1406 aa		13.23	□□□□□ -0.29
HNRNPC-222	ENST00000555914	PNPLA6	Q8IY17	1366 aa		13.22	□□□□□ -0.29
HNRNPC-222	ENST00000555914	IFT172	Q9UG01	1749 aa		13.21	□□□□□ -0.29
HNRNPC-222	ENST00000555914	TMEM132E	Q6IEE7	984 aa		13.21	□□□□□ -0.3

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