RNA–Protein interactions for RNA: ENST00000555688.1

LINC00641-202, long intergenic non-protein coding RNA 641, humanhuman

TSL 1 (best) BASIC

Gene LINC00641, Length 1,763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-202ENST00000555688 KDM5BQ9UGL1 1544 aa11.31□□□□□ -0.6
LINC00641-202ENST00000555688 G3V3G9 751 aa11.31□□□□□ -0.6
LINC00641-202ENST00000555688 PPP1R15BQ5SWA1 713 aa11.31□□□□□ -0.6
LINC00641-202ENST00000555688 L3MBTL3Q96JM7 780 aaPredicted RBP11.31□□□□□ -0.6
LINC00641-202ENST00000555688 ZNF777Q9ULD5 760 aaPredicted RBP11.31□□□□□ -0.6
LINC00641-202ENST00000555688 DENND4BO75064 1496 aaPredicted RBP11.31□□□□□ -0.6
LINC00641-202ENST00000555688 SLC39A7Q92504 469 aa11.31□□□□□ -0.6
LINC00641-202ENST00000555688 NCOA1Q15788 1441 aa11.3□□□□□ -0.6
LINC00641-202ENST00000555688 CDC42BPBQ9Y5S2 1711 aa11.3□□□□□ -0.6
LINC00641-202ENST00000555688 ZCCHC11Q5TAX3 1644 aaKnown RBP11.29□□□□□ -0.6
LINC00641-202ENST00000555688 ADGRL2O95490 1459 aa11.29□□□□□ -0.6
LINC00641-202ENST00000555688 SEC24BO95487 1268 aa11.29□□□□□ -0.6
LINC00641-202ENST00000555688 DIEXFQ68CQ4 756 aaKnown RBP11.29□□□□□ -0.6
LINC00641-202ENST00000555688 TIMELESSQ9UNS1 1208 aa11.29□□□□□ -0.6
LINC00641-202ENST00000555688 CROCC2H7BZ55 1655 aa11.29□□□□□ -0.6
LINC00641-202ENST00000555688 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.29□□□□□ -0.6
LINC00641-202ENST00000555688 NEUROD1Q13562 356 aa11.28□□□□□ -0.6
LINC00641-202ENST00000555688 TMC2Q8TDI7 906 aa11.28□□□□□ -0.6
LINC00641-202ENST00000555688 PREX2Q70Z35 1606 aa11.28□□□□□ -0.6
LINC00641-202ENST00000555688 C7P10643 843 aa11.28□□□□□ -0.6
LINC00641-202ENST00000555688 MBD5Q9P267 1494 aa11.28□□□□□ -0.6
LINC00641-202ENST00000555688 TTC37Q6PGP7 1564 aa11.28□□□□□ -0.6
LINC00641-202ENST00000555688 COLQQ9Y215 455 aaPredicted RBP11.27□□□□□ -0.61
LINC00641-202ENST00000555688 ADGBQ8N7X0 1667 aa11.26□□□□□ -0.61
LINC00641-202ENST00000555688 SAMD9LQ8IVG5 1584 aa11.26□□□□□ -0.61
LINC00641-202ENST00000555688 FOXK1P85037 733 aa11.26□□□□□ -0.61
LINC00641-202ENST00000555688 DSG2Q14126 1118 aa11.26□□□□□ -0.61
LINC00641-202ENST00000555688 MPHOSPH9Q99550 1183 aa11.26□□□□□ -0.61
LINC00641-202ENST00000555688 ACIN1Q9UKV3 1341 aaKnown RBP11.26□□□□□ -0.61
LINC00641-202ENST00000555688 ARHGEF5Q12774 1597 aa11.26□□□□□ -0.61
LINC00641-202ENST00000555688 HNRNPMP52272 730 aaKnown RBP eCLIP11.26□□□□□ -0.611e-8■■□□□ 13.4
LINC00641-202ENST00000555688 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.26□□□□□ -0.61
LINC00641-202ENST00000555688 TRIM52Q96A61 297 aa11.26□□□□□ -0.61
LINC00641-202ENST00000555688 SHANK2Q9UPX8 1470 aa11.25□□□□□ -0.61
LINC00641-202ENST00000555688 TULP1O00294 542 aaPredicted RBP11.25□□□□□ -0.61
LINC00641-202ENST00000555688 ANKRD30AQ9BXX3 1397 aa11.24□□□□□ -0.61
LINC00641-202ENST00000555688 TESPA1A2RU30 521 aaPredicted RBP11.24□□□□□ -0.61
LINC00641-202ENST00000555688 KIF3CO14782 793 aa11.24□□□□□ -0.61
LINC00641-202ENST00000555688 PPP1R15AO75807 674 aaPredicted RBP11.24□□□□□ -0.61
LINC00641-202ENST00000555688 LHX8Q68G74 356 aa11.24□□□□□ -0.61
LINC00641-202ENST00000555688 KCNH8Q96L42 1107 aa11.24□□□□□ -0.61
LINC00641-202ENST00000555688 SEMA3EO15041 775 aa11.23□□□□□ -0.61
LINC00641-202ENST00000555688 POTEIP0CG38 1075 aa11.23□□□□□ -0.61
LINC00641-202ENST00000555688 C9orf84Q5VXU9 1444 aa11.23□□□□□ -0.61
LINC00641-202ENST00000555688 POTEFA5A3E0 1075 aa11.23□□□□□ -0.61
LINC00641-202ENST00000555688 RSPH4AQ5TD94 716 aa11.23□□□□□ -0.61
LINC00641-202ENST00000555688 PLCH2O75038 1416 aa11.22□□□□□ -0.61
LINC00641-202ENST00000555688 C2orf72A6NCS6 295 aa11.22□□□□□ -0.61
LINC00641-202ENST00000555688 LMOD2Q6P5Q4 547 aa11.22□□□□□ -0.61
LINC00641-202ENST00000555688 MYO5CQ9NQX4 1742 aa11.22□□□□□ -0.61
LINC00641-202ENST00000555688 TSPY4P0CV99 314 aa11.21□□□□□ -0.61
LINC00641-202ENST00000555688 TSPY10P0CW01 314 aa11.21□□□□□ -0.61
LINC00641-202ENST00000555688 METRNQ9UJH8 293 aa11.21□□□□□ -0.61
LINC00641-202ENST00000555688 KIAA1107Q9UPP5 1409 aa11.21□□□□□ -0.62
LINC00641-202ENST00000555688 CCDC141Q6ZP82 1450 aa11.21□□□□□ -0.62
LINC00641-202ENST00000555688 ARHGAP5Q13017 1502 aa11.21□□□□□ -0.62
LINC00641-202ENST00000555688 ANKRD50Q9ULJ7 1429 aa11.2□□□□□ -0.62
LINC00641-202ENST00000555688 PZPP20742 1482 aa11.2□□□□□ -0.62
LINC00641-202ENST00000555688 ANKRD30BQ9BXX2 1392 aa11.2□□□□□ -0.62
LINC00641-202ENST00000555688 PLPP6Q8IY26 295 aa11.19□□□□□ -0.62
LINC00641-202ENST00000555688 EMILIN3Q9NT22 766 aa11.19□□□□□ -0.62
LINC00641-202ENST00000555688 SYCP2Q9BX26 1530 aa11.19□□□□□ -0.62
LINC00641-202ENST00000555688 ARHGEF12Q9NZN5 1544 aa11.19□□□□□ -0.62
LINC00641-202ENST00000555688 WDR7Q9Y4E6 1490 aa11.18□□□□□ -0.62
LINC00641-202ENST00000555688 TONSLQ96HA7 1378 aa11.18□□□□□ -0.62
LINC00641-202ENST00000555688 PLEKHH2Q8IVE3 1493 aa11.18□□□□□ -0.62
LINC00641-202ENST00000555688 MAST1Q9Y2H9 1570 aa11.18□□□□□ -0.62
LINC00641-202ENST00000555688 KIF15Q9NS87 1388 aa11.17□□□□□ -0.62
LINC00641-202ENST00000555688 EFCAB2Q5VUJ9 269 aa11.17□□□□□ -0.62
LINC00641-202ENST00000555688 SMYD5Q6GMV2 418 aa11.17□□□□□ -0.62
LINC00641-202ENST00000555688 TMEM92Q6UXU6 159 aa11.17□□□□□ -0.62
LINC00641-202ENST00000555688 ARAP3Q8WWN8 1544 aa11.16□□□□□ -0.62
LINC00641-202ENST00000555688 ASXL2Q76L83 1435 aa11.15□□□□□ -0.62
LINC00641-202ENST00000555688 SPDYE16A6NNV3 312 aaPredicted RBP11.15□□□□□ -0.62
LINC00641-202ENST00000555688 DPYSL4O14531 572 aa11.14□□□□□ -0.63
LINC00641-202ENST00000555688 ABCC1P33527 1531 aa11.14□□□□□ -0.63
LINC00641-202ENST00000555688 ABCA9Q8IUA7 1624 aa11.14□□□□□ -0.63
LINC00641-202ENST00000555688 KDM5DQ9BY66 1539 aa11.13□□□□□ -0.63
LINC00641-202ENST00000555688 RPRD2Q5VT52 1461 aaKnown RBP11.13□□□□□ -0.63
LINC00641-202ENST00000555688 PDIA6Q15084 440 aa11.13□□□□□ -0.63
LINC00641-202ENST00000555688 TRAPPC8Q9Y2L5 1435 aa11.13□□□□□ -0.63
LINC00641-202ENST00000555688 NUP155O75694 1391 aa11.12□□□□□ -0.63
LINC00641-202ENST00000555688 PLXNC1O60486 1568 aa11.12□□□□□ -0.63
LINC00641-202ENST00000555688 L3MBTL2Q969R5 705 aa11.11□□□□□ -0.63
LINC00641-202ENST00000555688 C3orf67Q6ZVT6 689 aa11.11□□□□□ -0.63
LINC00641-202ENST00000555688 TEX14Q8IWB6 1497 aa11.09□□□□□ -0.63
LINC00641-202ENST00000555688 AFAP1Q8N556 730 aa11.08□□□□□ -0.64
LINC00641-202ENST00000555688 FANCAO15360 1455 aa11.08□□□□□ -0.64
LINC00641-202ENST00000555688 MLLT3P42568 568 aaPredicted RBP11.08□□□□□ -0.64
LINC00641-202ENST00000555688 DUOX2Q9NRD8 1548 aa11.07□□□□□ -0.64
LINC00641-202ENST00000555688 RTEL1-TNFRSF6BF6WH68 1400 aa11.07□□□□□ -0.64
LINC00641-202ENST00000555688 UNC13BO14795 1591 aa11.07□□□□□ -0.64
LINC00641-202ENST00000555688 MAP3K9P80192 1104 aa11.07□□□□□ -0.64
LINC00641-202ENST00000555688 ZC3H15Q8WU90 426 aaKnown RBP11.07□□□□□ -0.64
LINC00641-202ENST00000555688 FAM135AQ9P2D6 1515 aa11.06□□□□□ -0.64
LINC00641-202ENST00000555688 OXER1Q8TDS5 423 aa11.06□□□□□ -0.64
LINC00641-202ENST00000555688 NBPF8Q3BBV2 869 aa11.05□□□□□ -0.64
LINC00641-202ENST00000555688 HIRIP3Q9BW71 556 aaPredicted RBP11.05□□□□□ -0.64
LINC00641-202ENST00000555688 ERBINQ96RT1 1412 aa11.05□□□□□ -0.64
LINC00641-202ENST00000555688 SPAG9O60271 1321 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms