RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 PROSER2Q86WR7 435 aaPredicted RBP23.32■■□□□ 1.32
SNX6-205ENST00000555648 GCC2Q8IWJ2 1684 aa23.31■■□□□ 1.32
SNX6-205ENST00000555648 IQGAP3Q86VI3 1631 aa23.29■■□□□ 1.32
SNX6-205ENST00000555648 PLEKHG1Q9ULL1 1385 aa23.28■■□□□ 1.32
SNX6-205ENST00000555648 TMEM94Q12767 1356 aa23.27■■□□□ 1.32
SNX6-205ENST00000555648 STRCP1A6NGW2 1772 aa23.27■■□□□ 1.32
SNX6-205ENST00000555648 ZFYVE9O95405 1425 aa23.26■■□□□ 1.31
SNX6-205ENST00000555648 NUTM2DQ5VT03 806 aaPredicted RBP23.26■■□□□ 1.31
SNX6-205ENST00000555648 TRIM52Q96A61 297 aa23.25■■□□□ 1.31
SNX6-205ENST00000555648 E9PCH4 1651 aa23.25■■□□□ 1.31
SNX6-205ENST00000555648 ILDR2Q71H61 639 aa23.24■■□□□ 1.31
SNX6-205ENST00000555648 TBX22Q9Y458 520 aa23.24■■□□□ 1.31
SNX6-205ENST00000555648 ZNF326Q5BKZ1 582 aaKnown RBP23.23■■□□□ 1.31
SNX6-205ENST00000555648 RBM33Q96EV2 1170 aaKnown RBP23.23■■□□□ 1.31
SNX6-205ENST00000555648 TMEM131LA2VDJ0 1609 aa23.22■■□□□ 1.31
SNX6-205ENST00000555648 NAIPQ13075 1403 aa23.21■■□□□ 1.31
SNX6-205ENST00000555648 NKTRP30414 1462 aaKnown RBP23.2■■□□□ 1.3
SNX6-205ENST00000555648 ALKQ9UM73 1620 aa23.19■■□□□ 1.3
SNX6-205ENST00000555648 MSH6P52701 1360 aa23.19■■□□□ 1.3
SNX6-205ENST00000555648 C14orf37Q86TY3 774 aa23.19■■□□□ 1.3
SNX6-205ENST00000555648 PHF23Q9BUL5 403 aaPredicted RBP23.17■■□□□ 1.3
SNX6-205ENST00000555648 SLC4A1APQ9BWU0 796 aaKnown RBP23.14■■□□□ 1.29
SNX6-205ENST00000555648 HFM1A2PYH4 1435 aa23.14■■□□□ 1.29
SNX6-205ENST00000555648 SOCS7O14512 581 aa23.13■■□□□ 1.29
SNX6-205ENST00000555648 FAM135BQ49AJ0 1406 aa23.13■■□□□ 1.29
SNX6-205ENST00000555648 NWD1Q149M9 1564 aa23.13■■□□□ 1.29
SNX6-205ENST00000555648 MYO5BQ9ULV0 1848 aa23.12■■□□□ 1.29
SNX6-205ENST00000555648 PIK3R4Q99570 1358 aa23.12■■□□□ 1.29
SNX6-205ENST00000555648 ADAMTS13Q76LX8 1427 aa23.11■■□□□ 1.29
SNX6-205ENST00000555648 SLAIN2Q9P270 581 aa23.09■■□□□ 1.29
SNX6-205ENST00000555648 AMOTL2Q9Y2J4 779 aa23.09■■□□□ 1.29
SNX6-205ENST00000555648 DIP2AQ14689 1571 aa23.09■■□□□ 1.29
SNX6-205ENST00000555648 MED1Q15648 1581 aaPredicted RBP23.09■■□□□ 1.29
SNX6-205ENST00000555648 SPHKAPQ2M3C7 1700 aa23.07■■□□□ 1.28
SNX6-205ENST00000555648 NCOA3Q9Y6Q9 1424 aa23.07■■□□□ 1.28
SNX6-205ENST00000555648 ATF3P18847 181 aa23.06■■□□□ 1.28
SNX6-205ENST00000555648 XIRP1Q702N8 1843 aaKnown RBP23.05■■□□□ 1.28
SNX6-205ENST00000555648 TRPM2O94759 1503 aa23.05■■□□□ 1.28
SNX6-205ENST00000555648 CADPS2Q86UW7 1296 aa23.05■■□□□ 1.28
SNX6-205ENST00000555648 C19orf44Q9H6X5 657 aa23.05■■□□□ 1.28
SNX6-205ENST00000555648 VGFO15240 615 aaPredicted RBP23.02■■□□□ 1.28
SNX6-205ENST00000555648 CHD2O14647 1828 aaKnown RBP23.01■■□□□ 1.27
SNX6-205ENST00000555648 CLTCL1P53675 1640 aa22.99■■□□□ 1.27
SNX6-205ENST00000555648 RPGRIP1LQ68CZ1 1315 aa22.98■■□□□ 1.27
SNX6-205ENST00000555648 PTPRUQ92729 1446 aa22.97■■□□□ 1.27
SNX6-205ENST00000555648 SETBP1Q9Y6X0 1596 aa22.97■■□□□ 1.27
SNX6-205ENST00000555648 ROBO1Q9Y6N7 1651 aa22.97■■□□□ 1.27
SNX6-205ENST00000555648 FOXD1Q16676 465 aa22.96■■□□□ 1.27
SNX6-205ENST00000555648 ACIN1Q9UKV3 1341 aaKnown RBP22.96■■□□□ 1.27
SNX6-205ENST00000555648 METP08581 1390 aa22.96■■□□□ 1.27
SNX6-205ENST00000555648 MPHOSPH9Q99550 1183 aa22.94■■□□□ 1.26
SNX6-205ENST00000555648 NEXMIFQ5QGS0 1516 aa22.93■■□□□ 1.26
SNX6-205ENST00000555648 CCDC144AA2RUR9 1427 aa22.91■■□□□ 1.26
SNX6-205ENST00000555648 JCADQ9P266 1359 aa22.9■■□□□ 1.26
SNX6-205ENST00000555648 KIF1BO60333 1816 aa22.9■■□□□ 1.26
SNX6-205ENST00000555648 RGL3Q3MIN7 710 aa22.89■■□□□ 1.25
SNX6-205ENST00000555648 NRXN3Q9Y4C0 1643 aa22.89■■□□□ 1.25
SNX6-205ENST00000555648 DCCP43146 1447 aa22.88■■□□□ 1.25
SNX6-205ENST00000555648 SETD5Q9C0A6 1442 aa22.86■■□□□ 1.25
SNX6-205ENST00000555648 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.85■■□□□ 1.25
SNX6-205ENST00000555648 BRINP3Q76B58 766 aa22.85■■□□□ 1.25
SNX6-205ENST00000555648 PHLPP1O60346 1717 aa22.83■■□□□ 1.25
SNX6-205ENST00000555648 XRN1Q8IZH2 1706 aaKnown RBP22.83■■□□□ 1.25
SNX6-205ENST00000555648 ADGRL3Q9HAR2 1447 aa22.82■■□□□ 1.24
SNX6-205ENST00000555648 MEX3CQ5U5Q3 659 aaKnown RBP22.82■■□□□ 1.24
SNX6-205ENST00000555648 RGS17Q9UGC6 210 aaPredicted RBP22.81■■□□□ 1.24
SNX6-205ENST00000555648 SPATA31A6Q5VVP1 1343 aa22.81■■□□□ 1.24
SNX6-205ENST00000555648 ANKRD30BQ9BXX2 1392 aa22.8■■□□□ 1.24
SNX6-205ENST00000555648 PTCH1Q13635 1447 aa22.79■■□□□ 1.24
SNX6-205ENST00000555648 MST1RQ04912 1400 aa22.78■■□□□ 1.24
SNX6-205ENST00000555648 ADGRF5Q8IZF2 1346 aa22.78■■□□□ 1.24
SNX6-205ENST00000555648 ROBO2Q9HCK4 1378 aa22.77■■□□□ 1.24
SNX6-205ENST00000555648 RAB3GAP2Q9H2M9 1393 aa22.76■■□□□ 1.23
SNX6-205ENST00000555648 AHDC1Q5TGY3 1603 aaPredicted RBP22.75■■□□□ 1.23
SNX6-205ENST00000555648 STK26Q9P289 416 aa22.75■■□□□ 1.23
SNX6-205ENST00000555648 COL16A1Q07092 1604 aaPredicted RBP22.75■■□□□ 1.23
SNX6-205ENST00000555648 SPATA31E1Q6ZUB1 1445 aa22.74■■□□□ 1.23
SNX6-205ENST00000555648 ASXL1Q8IXJ9 1541 aa22.74■■□□□ 1.23
SNX6-205ENST00000555648 LRRC59Q96AG4 307 aaKnown RBP22.74■■□□□ 1.23
SNX6-205ENST00000555648 NUTM2BA6NNL0 878 aaPredicted RBP22.73■■□□□ 1.23
SNX6-205ENST00000555648 NUTM2EB1AL46 878 aaPredicted RBP22.73■■□□□ 1.23
SNX6-205ENST00000555648 POTEAQ6S8J7 498 aa22.73■■□□□ 1.23
SNX6-205ENST00000555648 NUTM2AQ8IVF1 878 aaPredicted RBP22.73■■□□□ 1.23
SNX6-205ENST00000555648 PPLO60437 1756 aa22.71■■□□□ 1.23
SNX6-205ENST00000555648 C1orf167Q5SNV9 1468 aa22.69■■□□□ 1.22
SNX6-205ENST00000555648 PRAG1Q86YV5 1406 aa22.69■■□□□ 1.22
SNX6-205ENST00000555648 ZNF772Q68DY9 489 aaPredicted RBP22.69■■□□□ 1.22
SNX6-205ENST00000555648 TMEM132EQ6IEE7 984 aa22.68■■□□□ 1.22
SNX6-205ENST00000555648 DDX17Q92841 729 aaKnown RBP22.68■■□□□ 1.22
SNX6-205ENST00000555648 LRPPRCP42704 1394 aaKnown RBP22.66■■□□□ 1.22
SNX6-205ENST00000555648 ORAI2Q96SN7 254 aa22.66■■□□□ 1.22
SNX6-205ENST00000555648 WAPLQ7Z5K2 1190 aa22.65■■□□□ 1.22
SNX6-205ENST00000555648 SETD1AO15047 1707 aaKnown RBP22.65■■□□□ 1.22
SNX6-205ENST00000555648 NALCNQ8IZF0 1738 aa22.65■■□□□ 1.22
SNX6-205ENST00000555648 PIK3C2GO75747 1445 aa22.65■■□□□ 1.22
SNX6-205ENST00000555648 ESCO1Q5FWF5 840 aa22.64■■□□□ 1.21
SNX6-205ENST00000555648 LRP6O75581 1613 aa22.64■■□□□ 1.21
SNX6-205ENST00000555648 ABCC11Q96J66 1382 aa22.63■■□□□ 1.21
SNX6-205ENST00000555648 HRCP23327 699 aa22.62■■□□□ 1.21
SNX6-205ENST00000555648 C14orf93Q9H972 538 aaKnown RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms