RNA–Protein interactions for RNA: ENST00000555632.5

GABRB3-209, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-209ENST00000555632 ARHGAP31Q2M1Z3 1444 aa25.34■■□□□ 1.65
GABRB3-209ENST00000555632 SCAF11Q99590 1463 aaKnown RBP25.33■■□□□ 1.64
GABRB3-209ENST00000555632 NRXN1Q9ULB1 1477 aa25.32■■□□□ 1.64
GABRB3-209ENST00000555632 PIK3C2BO00750 1634 aa25.31■■□□□ 1.64
GABRB3-209ENST00000555632 KIAA1210Q9ULL0 1709 aa25.31■■□□□ 1.64
GABRB3-209ENST00000555632 MRS2Q9HD23 443 aa25.31■■□□□ 1.64
GABRB3-209ENST00000555632 IDI1Q13907 227 aa25.3■■□□□ 1.64
GABRB3-209ENST00000555632 TMF1P82094 1093 aa25.29■■□□□ 1.64
GABRB3-209ENST00000555632 PPLO60437 1756 aa25.29■■□□□ 1.64
GABRB3-209ENST00000555632 NUTM2DQ5VT03 806 aaPredicted RBP25.28■■□□□ 1.64
GABRB3-209ENST00000555632 FBXO31Q5XUX0 539 aaPredicted RBP25.28■■□□□ 1.64
GABRB3-209ENST00000555632 REREQ9P2R6 1566 aa25.27■■□□□ 1.64
GABRB3-209ENST00000555632 MLECQ14165 292 aa25.25■■□□□ 1.63
GABRB3-209ENST00000555632 FAM9BQ8IZU0 186 aa25.25■■□□□ 1.63
GABRB3-209ENST00000555632 AGLP35573 1532 aa25.25■■□□□ 1.63
GABRB3-209ENST00000555632 PREX1Q8TCU6 1659 aa25.25■■□□□ 1.63
GABRB3-209ENST00000555632 HNRNPUQ00839 825 aaKnown RBP eCLIP25.24■■□□□ 1.63
GABRB3-209ENST00000555632 PIK3C2GO75747 1445 aa25.24■■□□□ 1.63
GABRB3-209ENST00000555632 PER1O15534 1290 aaPredicted RBP25.23■■□□□ 1.63
GABRB3-209ENST00000555632 RPGRIP1LQ68CZ1 1315 aa25.21■■□□□ 1.63
GABRB3-209ENST00000555632 ARHGEF40Q8TER5 1519 aa25.21■■□□□ 1.63
GABRB3-209ENST00000555632 PANK3Q9H999 370 aa25.2■■□□□ 1.62
GABRB3-209ENST00000555632 SLC52A1Q9NWF4 448 aa25.19■■□□□ 1.62
GABRB3-209ENST00000555632 NEXMIFQ5QGS0 1516 aa25.19■■□□□ 1.62
GABRB3-209ENST00000555632 C14orf93Q9H972 538 aaKnown RBP25.19■■□□□ 1.62
GABRB3-209ENST00000555632 CLTCQ00610 1675 aaKnown RBP25.18■■□□□ 1.62
GABRB3-209ENST00000555632 TMEM132EQ6IEE7 984 aa25.18■■□□□ 1.62
GABRB3-209ENST00000555632 EIF3AQ14152 1382 aaKnown RBP25.18■■□□□ 1.62
GABRB3-209ENST00000555632 MYO5BQ9ULV0 1848 aa25.18■■□□□ 1.62
GABRB3-209ENST00000555632 SENP3Q9H4L4 574 aaPredicted RBP25.18■■□□□ 1.62
GABRB3-209ENST00000555632 ERVK-7P63135 1459 aa25.16■■□□□ 1.62
GABRB3-209ENST00000555632 ADGRB1O14514 1584 aa25.15■■□□□ 1.62
GABRB3-209ENST00000555632 SETBP1Q9Y6X0 1596 aa25.14■■□□□ 1.62
GABRB3-209ENST00000555632 TRAK1Q9UPV9 953 aa25.14■■□□□ 1.62
GABRB3-209ENST00000555632 TMEM131LA2VDJ0 1609 aa25.14■■□□□ 1.61
GABRB3-209ENST00000555632 PPP6R1Q9UPN7 881 aa25.13■■□□□ 1.61
GABRB3-209ENST00000555632 VGFO15240 615 aaPredicted RBP25.12■■□□□ 1.61
GABRB3-209ENST00000555632 RALBP1Q15311 655 aa25.1■■□□□ 1.61
GABRB3-209ENST00000555632 CC2D1BQ5T0F9 858 aaKnown RBP25.1■■□□□ 1.61
GABRB3-209ENST00000555632 PARD3Q8TEW0 1356 aa25.09■■□□□ 1.61
GABRB3-209ENST00000555632 MYBBP1AQ9BQG0 1328 aaKnown RBP25.09■■□□□ 1.61
GABRB3-209ENST00000555632 KTN1Q86UP2 1357 aaKnown RBP25.09■■□□□ 1.61
GABRB3-209ENST00000555632 MYO3AQ8NEV4 1616 aa25.07■■□□□ 1.6
GABRB3-209ENST00000555632 CDCA8Q53HL2 280 aa25.07■■□□□ 1.6
GABRB3-209ENST00000555632 TMC1Q8TDI8 760 aa25.07■■□□□ 1.6
GABRB3-209ENST00000555632 MYOM1P52179 1685 aa25.06■■□□□ 1.6
GABRB3-209ENST00000555632 CENPJQ9HC77 1338 aaPredicted RBP25.06■■□□□ 1.6
GABRB3-209ENST00000555632 PNISRQ8TF01 805 aaKnown RBP25.06■■□□□ 1.6
GABRB3-209ENST00000555632 SPATA31D1Q6ZQQ2 1576 aa25.04■■□□□ 1.6
GABRB3-209ENST00000555632 ZFYVE9O95405 1425 aa25.03■■□□□ 1.6
GABRB3-209ENST00000555632 KDM5AP29375 1690 aaKnown RBP25.03■■□□□ 1.6
GABRB3-209ENST00000555632 STAG3Q9UJ98 1225 aa25.02■■□□□ 1.6
GABRB3-209ENST00000555632 ZMYM3Q14202 1370 aa25.02■■□□□ 1.6
GABRB3-209ENST00000555632 BRD4O60885 1362 aaPredicted RBP25.01■■□□□ 1.59
GABRB3-209ENST00000555632 SBNO2Q9Y2G9 1366 aa25.01■■□□□ 1.59
GABRB3-209ENST00000555632 SENP3-EIF4A1A0A087X0R7 540 aa25■■□□□ 1.59
GABRB3-209ENST00000555632 SUPT16HQ9Y5B9 1047 aaKnown RBP25■■□□□ 1.59
GABRB3-209ENST00000555632 ASXL1Q8IXJ9 1541 aa24.99■■□□□ 1.59
GABRB3-209ENST00000555632 QRICH2Q9H0J4 1663 aa24.99■■□□□ 1.59
GABRB3-209ENST00000555632 TRHP20396 242 aaPredicted RBP24.98■■□□□ 1.59
GABRB3-209ENST00000555632 NLRP13Q86W25 1043 aa24.98■■□□□ 1.59
GABRB3-209ENST00000555632 ESF1Q9H501 851 aaKnown RBP24.98■■□□□ 1.59
GABRB3-209ENST00000555632 KNSTRNQ9Y448 316 aa24.98■■□□□ 1.59
GABRB3-209ENST00000555632 A2ML1A8K2U0 1454 aa24.97■■□□□ 1.59
GABRB3-209ENST00000555632 AMER1Q5JTC6 1135 aaPredicted RBP24.97■■□□□ 1.59
GABRB3-209ENST00000555632 ZBED9Q6R2W3 1325 aa24.97■■□□□ 1.59
GABRB3-209ENST00000555632 STK26Q9P289 416 aa24.96■■□□□ 1.59
GABRB3-209ENST00000555632 ARHGEF28Q8N1W1 1705 aaKnown RBP24.95■■□□□ 1.59
GABRB3-209ENST00000555632 SLC24A1O60721 1099 aa24.95■■□□□ 1.59
GABRB3-209ENST00000555632 LRPPRCP42704 1394 aaKnown RBP24.93■■□□□ 1.58
GABRB3-209ENST00000555632 SAFB2Q14151 953 aaKnown RBP eCLIP24.93■■□□□ 1.58
GABRB3-209ENST00000555632 CARD14Q9BXL6 1004 aa24.92■■□□□ 1.58
GABRB3-209ENST00000555632 ALKQ9UM73 1620 aa24.89■■□□□ 1.57
GABRB3-209ENST00000555632 RIMS2Q9UQ26 1411 aa24.88■■□□□ 1.57
GABRB3-209ENST00000555632 FKBP8Q14318 412 aa24.88■■□□□ 1.57
GABRB3-209ENST00000555632 SLC12A5Q9H2X9 1139 aa24.88■■□□□ 1.57
GABRB3-209ENST00000555632 TULP4Q9NRJ4 1543 aa24.87■■□□□ 1.57
GABRB3-209ENST00000555632 YTHDC2Q9H6S0 1430 aaKnown RBP24.86■■□□□ 1.57
GABRB3-209ENST00000555632 CEBPAP49715 358 aaPredicted RBP24.85■■□□□ 1.57
GABRB3-209ENST00000555632 PPP2R1AP30153 589 aa24.85■■□□□ 1.57
GABRB3-209ENST00000555632 PTPRMP28827 1452 aa24.84■■□□□ 1.57
GABRB3-209ENST00000555632 TNRQ92752 1358 aa24.84■■□□□ 1.57
GABRB3-209ENST00000555632 PRAM1Q96QH2 718 aa24.83■■□□□ 1.57
GABRB3-209ENST00000555632 CABP2Q9NPB3 220 aa24.82■■□□□ 1.56
GABRB3-209ENST00000555632 EVC2Q86UK5 1308 aa24.81■■□□□ 1.56
GABRB3-209ENST00000555632 NPC1L1Q9UHC9 1359 aa24.81■■□□□ 1.56
GABRB3-209ENST00000555632 BCANQ96GW7 911 aa24.79■■□□□ 1.56
GABRB3-209ENST00000555632 MINK1Q8N4C8 1332 aaPredicted RBP24.79■■□□□ 1.56
GABRB3-209ENST00000555632 SETD1AO15047 1707 aaKnown RBP24.78■■□□□ 1.56
GABRB3-209ENST00000555632 PLPPR3Q6T4P5 718 aa24.77■■□□□ 1.56
GABRB3-209ENST00000555632 NRXN3Q9Y4C0 1643 aa24.77■■□□□ 1.56
GABRB3-209ENST00000555632 NSD3Q9BZ95 1437 aa24.76■■□□□ 1.55
GABRB3-209ENST00000555632 POGKQ9P215 609 aa24.76■■□□□ 1.55
GABRB3-209ENST00000555632 NEFLP07196 543 aa24.75■■□□□ 1.55
GABRB3-209ENST00000555632 SALL2Q9Y467 1007 aaPredicted RBP24.74■■□□□ 1.55
GABRB3-209ENST00000555632 UBR1Q8IWV7 1749 aa24.74■■□□□ 1.55
GABRB3-209ENST00000555632 WAPLQ7Z5K2 1190 aa24.73■■□□□ 1.55
GABRB3-209ENST00000555632 SRPK2P78362 688 aaKnown RBP24.73■■□□□ 1.55
GABRB3-209ENST00000555632 IRX6P78412 446 aaPredicted RBP24.73■■□□□ 1.55
GABRB3-209ENST00000555632 METP08581 1390 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms