RNA–Protein interactions for RNA: ENST00000555322.5

RPGRIP1-207, Transcript of RPGR interacting protein 1, humanhuman

TSL 1 (best)

Gene RPGRIP1, Length 2,373 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-207ENST00000555322 PPLO60437 1756 aa12.73□□□□□ -0.37
RPGRIP1-207ENST00000555322 SCAF11Q99590 1463 aaKnown RBP12.73□□□□□ -0.37
RPGRIP1-207ENST00000555322 GGT6Q6P531 493 aa12.72□□□□□ -0.37
RPGRIP1-207ENST00000555322 EIF3AQ14152 1382 aaKnown RBP12.72□□□□□ -0.37
RPGRIP1-207ENST00000555322 C11orf95C9JLR9 678 aaPredicted RBP12.71□□□□□ -0.37
RPGRIP1-207ENST00000555322 MYO3AQ8NEV4 1616 aa12.7□□□□□ -0.38
RPGRIP1-207ENST00000555322 KTN1Q86UP2 1357 aaKnown RBP12.7□□□□□ -0.38
RPGRIP1-207ENST00000555322 SLC52A1Q9NWF4 448 aa12.7□□□□□ -0.38
RPGRIP1-207ENST00000555322 ZFYVE9O95405 1425 aa12.7□□□□□ -0.38
RPGRIP1-207ENST00000555322 ST20-MTHFSA0A0A6YYL1 179 aa12.69□□□□□ -0.38
RPGRIP1-207ENST00000555322 PIK3C2GO75747 1445 aa12.69□□□□□ -0.38
RPGRIP1-207ENST00000555322 SPATA31D1Q6ZQQ2 1576 aa12.69□□□□□ -0.38
RPGRIP1-207ENST00000555322 ERVK-7P63135 1459 aa12.68□□□□□ -0.38
RPGRIP1-207ENST00000555322 NEXMIFQ5QGS0 1516 aa12.68□□□□□ -0.38
RPGRIP1-207ENST00000555322 NBPF1Q3BBV0 1214 aa12.66□□□□□ -0.38
RPGRIP1-207ENST00000555322 TMEM131LA2VDJ0 1609 aa12.66□□□□□ -0.38
RPGRIP1-207ENST00000555322 SBNO2Q9Y2G9 1366 aa12.66□□□□□ -0.38
RPGRIP1-207ENST00000555322 CLTCQ00610 1675 aaKnown RBP12.66□□□□□ -0.38
RPGRIP1-207ENST00000555322 YTHDC1Q96MU7 727 aaKnown RBP12.64□□□□□ -0.39
RPGRIP1-207ENST00000555322 TESK2Q96S53 571 aa12.64□□□□□ -0.39
RPGRIP1-207ENST00000555322 KDM5AP29375 1690 aaKnown RBP12.64□□□□□ -0.39
RPGRIP1-207ENST00000555322 TMF1P82094 1093 aa12.64□□□□□ -0.39
RPGRIP1-207ENST00000555322 CDCA8Q53HL2 280 aa12.64□□□□□ -0.39
RPGRIP1-207ENST00000555322 PRKRIP1Q9H875 184 aaPredicted RBP12.64□□□□□ -0.39
RPGRIP1-207ENST00000555322 ADGRB1O14514 1584 aa12.63□□□□□ -0.39
RPGRIP1-207ENST00000555322 VGFO15240 615 aaPredicted RBP12.61□□□□□ -0.39
RPGRIP1-207ENST00000555322 ADGRF5Q8IZF2 1346 aa12.6□□□□□ -0.39
RPGRIP1-207ENST00000555322 DISP3Q9P2K9 1392 aa12.6□□□□□ -0.39
RPGRIP1-207ENST00000555322 C14orf93Q9H972 538 aaKnown RBP12.59□□□□□ -0.39
RPGRIP1-207ENST00000555322 IDI1Q13907 227 aa12.57□□□□□ -0.4
RPGRIP1-207ENST00000555322 RALBP1Q15311 655 aa12.57□□□□□ -0.4
RPGRIP1-207ENST00000555322 MYOM1P52179 1685 aa12.56□□□□□ -0.4
RPGRIP1-207ENST00000555322 CFAP70Q5T0N1 1121 aa12.56□□□□□ -0.4
RPGRIP1-207ENST00000555322 CHGAP10645 457 aaKnown RBP12.55□□□□□ -0.4
RPGRIP1-207ENST00000555322 QRICH2Q9H0J4 1663 aa12.55□□□□□ -0.4
RPGRIP1-207ENST00000555322 MYO5BQ9ULV0 1848 aa12.55□□□□□ -0.4
RPGRIP1-207ENST00000555322 CFAP65Q6ZU64 1925 aaKnown RBP12.55□□□□□ -0.4
RPGRIP1-207ENST00000555322 A2ML1A8K2U0 1454 aa12.55□□□□□ -0.4
RPGRIP1-207ENST00000555322 ARHGEF28Q8N1W1 1705 aaKnown RBP12.54□□□□□ -0.4
RPGRIP1-207ENST00000555322 PUS7Q96PZ0 661 aaKnown RBP12.54□□□□□ -0.4
RPGRIP1-207ENST00000555322 PARD3Q8TEW0 1356 aa12.54□□□□□ -0.4
RPGRIP1-207ENST00000555322 BRD4O60885 1362 aaPredicted RBP12.53□□□□□ -0.4
RPGRIP1-207ENST00000555322 NPC1L1Q9UHC9 1359 aa12.53□□□□□ -0.4
RPGRIP1-207ENST00000555322 ESF1Q9H501 851 aaKnown RBP12.53□□□□□ -0.4
RPGRIP1-207ENST00000555322 ZMYM3Q14202 1370 aa12.53□□□□□ -0.4
RPGRIP1-207ENST00000555322 SCAF1Q9H7N4 1312 aaKnown RBP12.52□□□□□ -0.4
RPGRIP1-207ENST00000555322 CENPJQ9HC77 1338 aaPredicted RBP12.52□□□□□ -0.4
RPGRIP1-207ENST00000555322 POLR3GLQ9BT43 218 aa12.52□□□□□ -0.41
RPGRIP1-207ENST00000555322 ASXL1Q8IXJ9 1541 aa12.52□□□□□ -0.41
RPGRIP1-207ENST00000555322 MYBBP1AQ9BQG0 1328 aaKnown RBP12.52□□□□□ -0.41
RPGRIP1-207ENST00000555322 NLRP1Q9C000 1473 aa12.52□□□□□ -0.41
RPGRIP1-207ENST00000555322 INSRP06213 1382 aa12.51□□□□□ -0.41
RPGRIP1-207ENST00000555322 DLC1Q96QB1 1528 aa12.51□□□□□ -0.41
RPGRIP1-207ENST00000555322 PER1O15534 1290 aaPredicted RBP12.51□□□□□ -0.41
RPGRIP1-207ENST00000555322 MRS2Q9HD23 443 aa12.5□□□□□ -0.41
RPGRIP1-207ENST00000555322 TNRQ92752 1358 aa12.5□□□□□ -0.41
RPGRIP1-207ENST00000555322 ALKQ9UM73 1620 aa12.5□□□□□ -0.41
RPGRIP1-207ENST00000555322 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.49□□□□□ -0.41
RPGRIP1-207ENST00000555322 USP32Q8NFA0 1604 aa12.49□□□□□ -0.41
RPGRIP1-207ENST00000555322 RIMS2Q9UQ26 1411 aa12.49□□□□□ -0.41
RPGRIP1-207ENST00000555322 SETD1AO15047 1707 aaKnown RBP12.49□□□□□ -0.41
RPGRIP1-207ENST00000555322 FBXO31Q5XUX0 539 aaPredicted RBP12.49□□□□□ -0.41
RPGRIP1-207ENST00000555322 NINLQ9Y2I6 1382 aa12.48□□□□□ -0.41
RPGRIP1-207ENST00000555322 UBR1Q8IWV7 1749 aa12.48□□□□□ -0.41
RPGRIP1-207ENST00000555322 FER1L4A9Z1Z3 1794 aa12.47□□□□□ -0.41
RPGRIP1-207ENST00000555322 NCBP3Q53F19 620 aaKnown RBP12.47□□□□□ -0.41
RPGRIP1-207ENST00000555322 HDGFP51858 240 aaKnown RBP12.47□□□□□ -0.41
RPGRIP1-207ENST00000555322 NLRP13Q86W25 1043 aa12.47□□□□□ -0.41
RPGRIP1-207ENST00000555322 PTPRMP28827 1452 aa12.46□□□□□ -0.41
RPGRIP1-207ENST00000555322 KNDC1Q76NI1 1749 aa12.46□□□□□ -0.41
RPGRIP1-207ENST00000555322 PANK3Q9H999 370 aa12.46□□□□□ -0.41
RPGRIP1-207ENST00000555322 GTF3C3Q9Y5Q9 886 aa12.46□□□□□ -0.41
RPGRIP1-207ENST00000555322 YTHDC2Q9H6S0 1430 aaKnown RBP12.46□□□□□ -0.42
RPGRIP1-207ENST00000555322 STAG3Q9UJ98 1225 aa12.45□□□□□ -0.42
RPGRIP1-207ENST00000555322 C3P01024 1663 aa12.45□□□□□ -0.42
RPGRIP1-207ENST00000555322 LRPPRCP42704 1394 aaKnown RBP12.45□□□□□ -0.42
RPGRIP1-207ENST00000555322 NRXN3Q9Y4C0 1643 aa12.45□□□□□ -0.42
RPGRIP1-207ENST00000555322 TULP4Q9NRJ4 1543 aa12.45□□□□□ -0.42
RPGRIP1-207ENST00000555322 ZBED9Q6R2W3 1325 aa12.44□□□□□ -0.42
RPGRIP1-207ENST00000555322 MLECQ14165 292 aa12.44□□□□□ -0.42
RPGRIP1-207ENST00000555322 EVC2Q86UK5 1308 aa12.43□□□□□ -0.42
RPGRIP1-207ENST00000555322 KNSTRNQ9Y448 316 aa12.43□□□□□ -0.42
RPGRIP1-207ENST00000555322 SLIT1O75093 1534 aa12.42□□□□□ -0.42
RPGRIP1-207ENST00000555322 TECPR2O15040 1411 aa12.42□□□□□ -0.42
RPGRIP1-207ENST00000555322 TMEM2Q9UHN6 1383 aa12.42□□□□□ -0.42
RPGRIP1-207ENST00000555322 HNRNPUQ00839 825 aaKnown RBP eCLIP12.42□□□□□ -0.42
RPGRIP1-207ENST00000555322 CCDC184Q52MB2 194 aa12.42□□□□□ -0.42
RPGRIP1-207ENST00000555322 TMC1Q8TDI8 760 aa12.42□□□□□ -0.42
RPGRIP1-207ENST00000555322 TRAK1Q9UPV9 953 aa12.42□□□□□ -0.42
RPGRIP1-207ENST00000555322 PNISRQ8TF01 805 aaKnown RBP12.41□□□□□ -0.42
RPGRIP1-207ENST00000555322 CPS1P31327 1500 aa12.41□□□□□ -0.42
RPGRIP1-207ENST00000555322 AMER1Q5JTC6 1135 aaPredicted RBP12.41□□□□□ -0.42
RPGRIP1-207ENST00000555322 ABCC11Q96J66 1382 aa12.41□□□□□ -0.42
RPGRIP1-207ENST00000555322 ARHGAP23Q9P227 1491 aa12.4□□□□□ -0.42
RPGRIP1-207ENST00000555322 DIP2AQ14689 1571 aa12.4□□□□□ -0.42
RPGRIP1-207ENST00000555322 TRHP20396 242 aaPredicted RBP12.4□□□□□ -0.42
RPGRIP1-207ENST00000555322 NSD2O96028 1365 aa12.4□□□□□ -0.42
RPGRIP1-207ENST00000555322 ATAD2Q6PL18 1390 aa12.4□□□□□ -0.42
RPGRIP1-207ENST00000555322 FAM135BQ49AJ0 1406 aa12.4□□□□□ -0.42
RPGRIP1-207ENST00000555322 TMEM132EQ6IEE7 984 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms