RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 NEUROD1Q13562 356 aa20.71■□□□□ 0.91
CHD8-208ENST00000555301 TXNDC2Q86VQ3 553 aa20.71■□□□□ 0.91
CHD8-208ENST00000555301 KIF1BO60333 1816 aa20.7■□□□□ 0.9
CHD8-208ENST00000555301 ZFYVE9O95405 1425 aa20.7■□□□□ 0.9
CHD8-208ENST00000555301 PPP1R15AO75807 674 aaPredicted RBP20.68■□□□□ 0.9
CHD8-208ENST00000555301 LTKP29376 864 aa20.68■□□□□ 0.9
CHD8-208ENST00000555301 SCAF11Q99590 1463 aaKnown RBP20.68■□□□□ 0.9
CHD8-208ENST00000555301 VGFO15240 615 aaPredicted RBP20.67■□□□□ 0.9
CHD8-208ENST00000555301 NCKAP5LQ9HCH0 1330 aa20.67■□□□□ 0.9
CHD8-208ENST00000555301 STAC3Q96MF2 364 aa20.66■□□□□ 0.9
CHD8-208ENST00000555301 NEXMIFQ5QGS0 1516 aa20.64■□□□□ 0.9
CHD8-208ENST00000555301 DMRT2Q9Y5R5 561 aa20.64■□□□□ 0.89
CHD8-208ENST00000555301 NUTM2DQ5VT03 806 aaPredicted RBP20.63■□□□□ 0.89
CHD8-208ENST00000555301 MED14O60244 1454 aa20.62■□□□□ 0.89
CHD8-208ENST00000555301 TONSLQ96HA7 1378 aa20.62■□□□□ 0.89
CHD8-208ENST00000555301 PLEKHG1Q9ULL1 1385 aa20.62■□□□□ 0.89
CHD8-208ENST00000555301 DCAF11Q8TEB1 546 aa20.62■□□□□ 0.89
CHD8-208ENST00000555301 NPHP4O75161 1426 aaPredicted RBP20.61■□□□□ 0.89
CHD8-208ENST00000555301 MYO5BQ9ULV0 1848 aa20.61■□□□□ 0.89
CHD8-208ENST00000555301 L3MBTL2Q969R5 705 aa20.6■□□□□ 0.89
CHD8-208ENST00000555301 TIMELESSQ9UNS1 1208 aa20.6■□□□□ 0.89
CHD8-208ENST00000555301 MYOM2P54296 1465 aa20.59■□□□□ 0.89
CHD8-208ENST00000555301 BCANQ96GW7 911 aa20.59■□□□□ 0.89
CHD8-208ENST00000555301 KDM2AQ9Y2K7 1162 aa20.58■□□□□ 0.89
CHD8-208ENST00000555301 ADGRF5Q8IZF2 1346 aa20.57■□□□□ 0.88
CHD8-208ENST00000555301 POLR1AO95602 1720 aaPredicted RBP20.56■□□□□ 0.88
CHD8-208ENST00000555301 STRCQ7RTU9 1775 aa20.55■□□□□ 0.88
CHD8-208ENST00000555301 PPLO60437 1756 aa20.54■□□□□ 0.88
CHD8-208ENST00000555301 TBX22Q9Y458 520 aa20.53■□□□□ 0.88
CHD8-208ENST00000555301 NRXN1Q9ULB1 1477 aa20.53■□□□□ 0.88
CHD8-208ENST00000555301 IFT172Q9UG01 1749 aa20.53■□□□□ 0.88
CHD8-208ENST00000555301 SLC26A8Q96RN1 970 aa20.52■□□□□ 0.88
CHD8-208ENST00000555301 PIK3C2GO75747 1445 aa20.52■□□□□ 0.87
CHD8-208ENST00000555301 IQGAP1P46940 1657 aa20.51■□□□□ 0.87
CHD8-208ENST00000555301 SETBP1Q9Y6X0 1596 aa20.51■□□□□ 0.87
CHD8-208ENST00000555301 SENP3Q9H4L4 574 aaPredicted RBP20.51■□□□□ 0.87
CHD8-208ENST00000555301 ADAMTS13Q76LX8 1427 aa20.51■□□□□ 0.87
CHD8-208ENST00000555301 DIP2AQ14689 1571 aa20.48■□□□□ 0.87
CHD8-208ENST00000555301 PRAG1Q86YV5 1406 aa20.48■□□□□ 0.87
CHD8-208ENST00000555301 C14orf93Q9H972 538 aaKnown RBP20.48■□□□□ 0.87
CHD8-208ENST00000555301 PIK3R4Q99570 1358 aa20.46■□□□□ 0.87
CHD8-208ENST00000555301 CFAP70Q5T0N1 1121 aa20.45■□□□□ 0.86
CHD8-208ENST00000555301 NRXN3Q9Y4C0 1643 aa20.45■□□□□ 0.86
CHD8-208ENST00000555301 ALKQ9UM73 1620 aa20.44■□□□□ 0.86
CHD8-208ENST00000555301 METP08581 1390 aa20.42■□□□□ 0.86
CHD8-208ENST00000555301 KCNA6P17658 529 aa20.41■□□□□ 0.86
CHD8-208ENST00000555301 LAMC1P11047 1609 aa20.4■□□□□ 0.86
CHD8-208ENST00000555301 NBPF8Q3BBV2 869 aa20.4■□□□□ 0.86
CHD8-208ENST00000555301 ZNF335Q9H4Z2 1342 aaPredicted RBP20.39■□□□□ 0.85
CHD8-208ENST00000555301 TMEM132EQ6IEE7 984 aa20.38■□□□□ 0.85
CHD8-208ENST00000555301 AMOTL2Q9Y2J4 779 aa20.37■□□□□ 0.85
CHD8-208ENST00000555301 LRPPRCP42704 1394 aaKnown RBP20.35■□□□□ 0.85
CHD8-208ENST00000555301 PTPRUQ92729 1446 aa20.35■□□□□ 0.85
CHD8-208ENST00000555301 ROCK2O75116 1388 aaKnown RBP20.34■□□□□ 0.85
CHD8-208ENST00000555301 SETD1AO15047 1707 aaKnown RBP20.34■□□□□ 0.85
CHD8-208ENST00000555301 KIAA1210Q9ULL0 1709 aa20.34■□□□□ 0.85
CHD8-208ENST00000555301 NBPF1Q3BBV0 1214 aa20.34■□□□□ 0.85
CHD8-208ENST00000555301 YTHDC2Q9H6S0 1430 aaKnown RBP20.34■□□□□ 0.85
CHD8-208ENST00000555301 ADGRB1O14514 1584 aa20.34■□□□□ 0.85
CHD8-208ENST00000555301 ASXL1Q8IXJ9 1541 aa20.33■□□□□ 0.85
CHD8-208ENST00000555301 NWD1Q149M9 1564 aa20.33■□□□□ 0.84
CHD8-208ENST00000555301 ABCC11Q96J66 1382 aa20.33■□□□□ 0.84
CHD8-208ENST00000555301 NKTRP30414 1462 aaKnown RBP20.32■□□□□ 0.84
CHD8-208ENST00000555301 RALGAPBQ86X10 1494 aa20.32■□□□□ 0.84
CHD8-208ENST00000555301 STK26Q9P289 416 aa20.32■□□□□ 0.84
CHD8-208ENST00000555301 CPS1P31327 1500 aa20.31■□□□□ 0.84
CHD8-208ENST00000555301 GPRASP1Q5JY77 1395 aa20.31■□□□□ 0.84
CHD8-208ENST00000555301 TECPR2O15040 1411 aa20.3■□□□□ 0.84
CHD8-208ENST00000555301 SIRT1Q96EB6 747 aa20.3■□□□□ 0.84
CHD8-208ENST00000555301 TRPM1Q7Z4N2 1603 aa20.3■□□□□ 0.84
CHD8-208ENST00000555301 PTCH1Q13635 1447 aa20.29■□□□□ 0.84
CHD8-208ENST00000555301 ZEB1P37275 1124 aaPredicted RBP20.29■□□□□ 0.84
CHD8-208ENST00000555301 CARD11Q9BXL7 1154 aa20.29■□□□□ 0.84
CHD8-208ENST00000555301 PROSER2Q86WR7 435 aaPredicted RBP20.28■□□□□ 0.84
CHD8-208ENST00000555301 TRAK1Q9UPV9 953 aa20.28■□□□□ 0.84
CHD8-208ENST00000555301 LTBP4Q8N2S1 1624 aa20.27■□□□□ 0.84
CHD8-208ENST00000555301 CHD2O14647 1828 aaKnown RBP20.27■□□□□ 0.84
CHD8-208ENST00000555301 XRN1Q8IZH2 1706 aaKnown RBP20.27■□□□□ 0.83
CHD8-208ENST00000555301 ROBO2Q9HCK4 1378 aa20.26■□□□□ 0.83
CHD8-208ENST00000555301 FAM135BQ49AJ0 1406 aa20.25■□□□□ 0.83
CHD8-208ENST00000555301 NCOA3Q9Y6Q9 1424 aa20.25■□□□□ 0.83
CHD8-208ENST00000555301 LRRC7Q96NW7 1537 aa20.24■□□□□ 0.83
CHD8-208ENST00000555301 DLC1Q96QB1 1528 aa20.24■□□□□ 0.83
CHD8-208ENST00000555301 TMEM94Q12767 1356 aa20.23■□□□□ 0.83
CHD8-208ENST00000555301 POGKQ9P215 609 aa20.23■□□□□ 0.83
CHD8-208ENST00000555301 EIF3AQ14152 1382 aaKnown RBP20.22■□□□□ 0.83
CHD8-208ENST00000555301 STRCP1A6NGW2 1772 aa20.22■□□□□ 0.83
CHD8-208ENST00000555301 PRAM1Q96QH2 718 aa20.22■□□□□ 0.83
CHD8-208ENST00000555301 KNDC1Q76NI1 1749 aa20.22■□□□□ 0.83
CHD8-208ENST00000555301 WAPLQ7Z5K2 1190 aa20.21■□□□□ 0.83
CHD8-208ENST00000555301 C14orf37Q86TY3 774 aa20.19■□□□□ 0.82
CHD8-208ENST00000555301 RBM33Q96EV2 1170 aaKnown RBP20.19■□□□□ 0.82
CHD8-208ENST00000555301 CERKQ8TCT0 537 aa20.18■□□□□ 0.82
CHD8-208ENST00000555301 CENPJQ9HC77 1338 aaPredicted RBP20.18■□□□□ 0.82
CHD8-208ENST00000555301 PLEKHH1Q9ULM0 1364 aa20.18■□□□□ 0.82
CHD8-208ENST00000555301 IQSEC2Q5JU85 1478 aa20.17■□□□□ 0.82
CHD8-208ENST00000555301 SAFB2Q14151 953 aaKnown RBP eCLIP20.16■□□□□ 0.82
CHD8-208ENST00000555301 C19orf44Q9H6X5 657 aa20.16■□□□□ 0.82
CHD8-208ENST00000555301 MSH6P52701 1360 aa20.16■□□□□ 0.82
CHD8-208ENST00000555301 USP47Q96K76 1375 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms