RNA–Protein interactions for RNA: ENST00000555243.1

PTPN21-207, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 5

Gene PTPN21, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-207ENST00000555243 NUP155O75694 1391 aa20.66■□□□□ 0.9
PTPN21-207ENST00000555243 UNC13BO14795 1591 aa20.66■□□□□ 0.9
PTPN21-207ENST00000555243 GCC2Q8IWJ2 1684 aa20.64■□□□□ 0.89
PTPN21-207ENST00000555243 RIMS2Q9UQ26 1411 aa20.63■□□□□ 0.89
PTPN21-207ENST00000555243 TMEM94Q12767 1356 aa20.63■□□□□ 0.89
PTPN21-207ENST00000555243 PHF23Q9BUL5 403 aaPredicted RBP20.63■□□□□ 0.89
PTPN21-207ENST00000555243 ALKQ9UM73 1620 aa20.62■□□□□ 0.89
PTPN21-207ENST00000555243 PLEKHG1Q9ULL1 1385 aa20.61■□□□□ 0.89
PTPN21-207ENST00000555243 MED1Q15648 1581 aaPredicted RBP20.59■□□□□ 0.89
PTPN21-207ENST00000555243 ZFYVE9O95405 1425 aa20.59■□□□□ 0.89
PTPN21-207ENST00000555243 NKTRP30414 1462 aaKnown RBP20.58■□□□□ 0.89
PTPN21-207ENST00000555243 IQGAP3Q86VI3 1631 aa20.58■□□□□ 0.89
PTPN21-207ENST00000555243 MSH6P52701 1360 aa20.57■□□□□ 0.88
PTPN21-207ENST00000555243 RBM33Q96EV2 1170 aaKnown RBP20.56■□□□□ 0.88
PTPN21-207ENST00000555243 TBX22Q9Y458 520 aa20.56■□□□□ 0.88
PTPN21-207ENST00000555243 TMEM131LA2VDJ0 1609 aa20.56■□□□□ 0.88
PTPN21-207ENST00000555243 E9PCH4 1651 aa20.55■□□□□ 0.88
PTPN21-207ENST00000555243 FAM135BQ49AJ0 1406 aa20.54■□□□□ 0.88
PTPN21-207ENST00000555243 NUTM2DQ5VT03 806 aaPredicted RBP20.54■□□□□ 0.88
PTPN21-207ENST00000555243 C14orf37Q86TY3 774 aa20.53■□□□□ 0.88
PTPN21-207ENST00000555243 NWD1Q149M9 1564 aa20.53■□□□□ 0.88
PTPN21-207ENST00000555243 XIRP1Q702N8 1843 aaKnown RBP20.52■□□□□ 0.88
PTPN21-207ENST00000555243 ZNF326Q5BKZ1 582 aaKnown RBP20.51■□□□□ 0.87
PTPN21-207ENST00000555243 MYO5BQ9ULV0 1848 aa20.5■□□□□ 0.87
PTPN21-207ENST00000555243 RRBP1Q9P2E9 1410 aaKnown RBP20.5■□□□□ 0.87
PTPN21-207ENST00000555243 PIK3R4Q99570 1358 aa20.47■□□□□ 0.87
PTPN21-207ENST00000555243 SLAIN2Q9P270 581 aa20.47■□□□□ 0.87
PTPN21-207ENST00000555243 DIP2AQ14689 1571 aa20.46■□□□□ 0.87
PTPN21-207ENST00000555243 TRIM52Q96A61 297 aa20.46■□□□□ 0.87
PTPN21-207ENST00000555243 NCOA3Q9Y6Q9 1424 aa20.45■□□□□ 0.86
PTPN21-207ENST00000555243 ADAMTS13Q76LX8 1427 aa20.44■□□□□ 0.86
PTPN21-207ENST00000555243 CHD2O14647 1828 aaKnown RBP20.43■□□□□ 0.86
PTPN21-207ENST00000555243 ATF3P18847 181 aa20.43■□□□□ 0.86
PTPN21-207ENST00000555243 NAIPQ13075 1403 aa20.43■□□□□ 0.86
PTPN21-207ENST00000555243 TRPM2O94759 1503 aa20.43■□□□□ 0.86
PTPN21-207ENST00000555243 CADPS2Q86UW7 1296 aa20.42■□□□□ 0.86
PTPN21-207ENST00000555243 AMOTL2Q9Y2J4 779 aa20.42■□□□□ 0.86
PTPN21-207ENST00000555243 ROBO1Q9Y6N7 1651 aa20.42■□□□□ 0.86
PTPN21-207ENST00000555243 SPHKAPQ2M3C7 1700 aa20.41■□□□□ 0.86
PTPN21-207ENST00000555243 C19orf44Q9H6X5 657 aa20.41■□□□□ 0.86
PTPN21-207ENST00000555243 HFM1A2PYH4 1435 aa20.37■□□□□ 0.85
PTPN21-207ENST00000555243 SLC4A1APQ9BWU0 796 aaKnown RBP20.37■□□□□ 0.85
PTPN21-207ENST00000555243 JCADQ9P266 1359 aa20.34■□□□□ 0.85
PTPN21-207ENST00000555243 PTPRUQ92729 1446 aa20.33■□□□□ 0.84
PTPN21-207ENST00000555243 SETBP1Q9Y6X0 1596 aa20.33■□□□□ 0.84
PTPN21-207ENST00000555243 VGFO15240 615 aaPredicted RBP20.32■□□□□ 0.84
PTPN21-207ENST00000555243 PHLPP1O60346 1717 aa20.32■□□□□ 0.84
PTPN21-207ENST00000555243 CLTCL1P53675 1640 aa20.31■□□□□ 0.84
PTPN21-207ENST00000555243 DCCP43146 1447 aa20.29■□□□□ 0.84
PTPN21-207ENST00000555243 RGS17Q9UGC6 210 aaPredicted RBP20.29■□□□□ 0.84
PTPN21-207ENST00000555243 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.29■□□□□ 0.84
PTPN21-207ENST00000555243 METP08581 1390 aa20.29■□□□□ 0.84
PTPN21-207ENST00000555243 RPGRIP1LQ68CZ1 1315 aa20.28■□□□□ 0.84
PTPN21-207ENST00000555243 KIF1BO60333 1816 aa20.28■□□□□ 0.84
PTPN21-207ENST00000555243 NEXMIFQ5QGS0 1516 aa20.27■□□□□ 0.84
PTPN21-207ENST00000555243 MEX3CQ5U5Q3 659 aaKnown RBP20.27■□□□□ 0.84
PTPN21-207ENST00000555243 NRXN3Q9Y4C0 1643 aa20.27■□□□□ 0.83
PTPN21-207ENST00000555243 SPATA31A6Q5VVP1 1343 aa20.26■□□□□ 0.83
PTPN21-207ENST00000555243 BRINP3Q76B58 766 aa20.25■□□□□ 0.83
PTPN21-207ENST00000555243 XRN1Q8IZH2 1706 aaKnown RBP20.24■□□□□ 0.83
PTPN21-207ENST00000555243 POTEAQ6S8J7 498 aa20.22■□□□□ 0.83
PTPN21-207ENST00000555243 COL16A1Q07092 1604 aaPredicted RBP20.22■□□□□ 0.83
PTPN21-207ENST00000555243 ACIN1Q9UKV3 1341 aaKnown RBP20.22■□□□□ 0.83
PTPN21-207ENST00000555243 ADGRL3Q9HAR2 1447 aa20.21■□□□□ 0.83
PTPN21-207ENST00000555243 AHDC1Q5TGY3 1603 aaPredicted RBP20.21■□□□□ 0.83
PTPN21-207ENST00000555243 CCDC144AA2RUR9 1427 aa20.2■□□□□ 0.82
PTPN21-207ENST00000555243 FOXD1Q16676 465 aa20.2■□□□□ 0.82
PTPN21-207ENST00000555243 MST1RQ04912 1400 aa20.19■□□□□ 0.82
PTPN21-207ENST00000555243 ZNF772Q68DY9 489 aaPredicted RBP20.17■□□□□ 0.82
PTPN21-207ENST00000555243 LRRC59Q96AG4 307 aaKnown RBP20.17■□□□□ 0.82
PTPN21-207ENST00000555243 MPHOSPH9Q99550 1183 aa20.17■□□□□ 0.82
PTPN21-207ENST00000555243 PTCH1Q13635 1447 aa20.17■□□□□ 0.82
PTPN21-207ENST00000555243 ASXL1Q8IXJ9 1541 aa20.17■□□□□ 0.82
PTPN21-207ENST00000555243 NUTM2BA6NNL0 878 aaPredicted RBP20.16■□□□□ 0.82
PTPN21-207ENST00000555243 NUTM2EB1AL46 878 aaPredicted RBP20.16■□□□□ 0.82
PTPN21-207ENST00000555243 RGL3Q3MIN7 710 aa20.16■□□□□ 0.82
PTPN21-207ENST00000555243 NUTM2AQ8IVF1 878 aaPredicted RBP20.16■□□□□ 0.82
PTPN21-207ENST00000555243 SETD5Q9C0A6 1442 aa20.12■□□□□ 0.81
PTPN21-207ENST00000555243 ANKRD30BQ9BXX2 1392 aa20.12■□□□□ 0.81
PTPN21-207ENST00000555243 ROBO2Q9HCK4 1378 aa20.12■□□□□ 0.81
PTPN21-207ENST00000555243 SHPRHQ149N8 1683 aa20.12■□□□□ 0.81
PTPN21-207ENST00000555243 LRP6O75581 1613 aa20.11■□□□□ 0.81
PTPN21-207ENST00000555243 C1orf167Q5SNV9 1468 aa20.1■□□□□ 0.81
PTPN21-207ENST00000555243 ADGRF5Q8IZF2 1346 aa20.09■□□□□ 0.81
PTPN21-207ENST00000555243 PPLO60437 1756 aa20.09■□□□□ 0.81
PTPN21-207ENST00000555243 NALCNQ8IZF0 1738 aa20.09■□□□□ 0.81
PTPN21-207ENST00000555243 PRAG1Q86YV5 1406 aa20.09■□□□□ 0.81
PTPN21-207ENST00000555243 DDX17Q92841 729 aaKnown RBP20.08■□□□□ 0.81
PTPN21-207ENST00000555243 STK26Q9P289 416 aa20.07■□□□□ 0.8
PTPN21-207ENST00000555243 NHSL1Q5SYE7 1610 aa20.06■□□□□ 0.8
PTPN21-207ENST00000555243 SPATA31E1Q6ZUB1 1445 aa20.06■□□□□ 0.8
PTPN21-207ENST00000555243 SETD1AO15047 1707 aaKnown RBP20.05■□□□□ 0.8
PTPN21-207ENST00000555243 RXRBP28702 533 aa20.05■□□□□ 0.8
PTPN21-207ENST00000555243 ORAI2Q96SN7 254 aa20.05■□□□□ 0.8
PTPN21-207ENST00000555243 PNPLA6Q8IY17 1366 aa20.04■□□□□ 0.8
PTPN21-207ENST00000555243 AFF2P51816 1311 aa20.03■□□□□ 0.8
PTPN21-207ENST00000555243 C8orf37Q96NL8 207 aa20.03■□□□□ 0.8
PTPN21-207ENST00000555243 ESCO1Q5FWF5 840 aa20.02■□□□□ 0.8
PTPN21-207ENST00000555243 LRPPRCP42704 1394 aaKnown RBP20.02■□□□□ 0.8
PTPN21-207ENST00000555243 NPHP3Q7Z494 1330 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms