RNA–Protein interactions for RNA: ENST00000555240.1

CASC1-208, Transcript of cancer susceptibility 1, humanhuman

TSL 5

Gene CASC1, Length 467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-208ENST00000555240 SWT1Q5T5J6 900 aaKnown RBP7.12□□□□□ -1.27
CASC1-208ENST00000555240 METTL3Q86U44 580 aaKnown RBP7.12□□□□□ -1.27
CASC1-208ENST00000555240 SLF2Q8IX21 1173 aa7.12□□□□□ -1.27
CASC1-208ENST00000555240 PXYLP1Q8TE99 480 aa7.12□□□□□ -1.27
CASC1-208ENST00000555240 TSR3Q9UJK0 312 aaKnown RBP7.12□□□□□ -1.27
CASC1-208ENST00000555240 MINK1Q8N4C8 1332 aaPredicted RBP7.11□□□□□ -1.27
CASC1-208ENST00000555240 IRF6O14896 467 aa7.11□□□□□ -1.27
CASC1-208ENST00000555240 ZMYND10O75800 440 aa7.1□□□□□ -1.27
CASC1-208ENST00000555240 Q6ZNB5 142 aa7.1□□□□□ -1.27
CASC1-208ENST00000555240 NECTIN2Q92692 538 aa7.1□□□□□ -1.27
CASC1-208ENST00000555240 TMEM134Q9H6X4 195 aa7.1□□□□□ -1.27
CASC1-208ENST00000555240 WBP1LQ9NX94 342 aa7.1□□□□□ -1.27
CASC1-208ENST00000555240 BARGINQ6ZT62 677 aa7.09□□□□□ -1.27
CASC1-208ENST00000555240 NYAP1Q6ZVC0 841 aa7.09□□□□□ -1.27
CASC1-208ENST00000555240 CCDC102AQ96A19 550 aa7.08□□□□□ -1.28
CASC1-208ENST00000555240 RSPH4AQ5TD94 716 aa7.07□□□□□ -1.28
CASC1-208ENST00000555240 LCE2BO14633 110 aa7.06□□□□□ -1.28
CASC1-208ENST00000555240 NLRP7Q8WX94 980 aa7.06□□□□□ -1.28
CASC1-208ENST00000555240 DAXXQ9UER7 740 aaPredicted RBP7.06□□□□□ -1.28
CASC1-208ENST00000555240 ITGBL1O95965 494 aaPredicted RBP7.05□□□□□ -1.28
CASC1-208ENST00000555240 PHOX2BQ99453 314 aa7.05□□□□□ -1.28
CASC1-208ENST00000555240 SULF1Q8IWU6 871 aa7.04□□□□□ -1.28
CASC1-208ENST00000555240 PRR14Q9BWN1 585 aa7.04□□□□□ -1.28
CASC1-208ENST00000555240 DDX11L8A8MPP1 907 aa7.03□□□□□ -1.28
CASC1-208ENST00000555240 MDM2Q00987 491 aaPredicted RBP7.03□□□□□ -1.28
CASC1-208ENST00000555240 RDH13Q8NBN7 331 aa7.03□□□□□ -1.28
CASC1-208ENST00000555240 KMT5BQ4FZB7 885 aa7.02□□□□□ -1.29
CASC1-208ENST00000555240 AK7Q96M32 723 aa7.02□□□□□ -1.29
CASC1-208ENST00000555240 CFHP08603 1231 aa7.01□□□□□ -1.29
CASC1-208ENST00000555240 CLCN1P35523 988 aa7.01□□□□□ -1.29
CASC1-208ENST00000555240 APLP1P51693 650 aa7.01□□□□□ -1.29
CASC1-208ENST00000555240 TTLL12Q14166 644 aaPredicted RBP7.01□□□□□ -1.29
CASC1-208ENST00000555240 SLC24A3Q9HC58 644 aa7.01□□□□□ -1.29
CASC1-208ENST00000555240 SLC10A3P09131 477 aa7□□□□□ -1.29
CASC1-208ENST00000555240 GPCPD1Q9NPB8 672 aa7□□□□□ -1.29
CASC1-208ENST00000555240 KCNC4Q03721 635 aa6.98□□□□□ -1.29
CASC1-208ENST00000555240 PCDHB3Q9Y5E6 796 aa6.98□□□□□ -1.29
CASC1-208ENST00000555240 TRIM66O15016 1216 aa6.97□□□□□ -1.29
CASC1-208ENST00000555240 ACTN4O43707 911 aaKnown RBP6.97□□□□□ -1.29
CASC1-208ENST00000555240 COPS2P61201 443 aa6.97□□□□□ -1.29
CASC1-208ENST00000555240 AMHR2Q16671 573 aa6.97□□□□□ -1.29
CASC1-208ENST00000555240 MTRQ99707 1265 aa6.97□□□□□ -1.29
CASC1-208ENST00000555240 IL21Q9HBE4 155 aa6.96□□□□□ -1.3
CASC1-208ENST00000555240 GCGRP47871 477 aa6.95□□□□□ -1.3
CASC1-208ENST00000555240 TRAF7Q6Q0C0 670 aa6.95□□□□□ -1.3
CASC1-208ENST00000555240 FAM217BQ9NTX9 383 aaPredicted RBP6.95□□□□□ -1.3
CASC1-208ENST00000555240 CD46P15529 392 aa6.94□□□□□ -1.3
CASC1-208ENST00000555240 SSTR3P32745 418 aaPredicted RBP6.94□□□□□ -1.3
CASC1-208ENST00000555240 TPRNQ4KMQ1 711 aa6.94□□□□□ -1.3
CASC1-208ENST00000555240 GRIPAP1Q4V328 841 aa6.94□□□□□ -1.3
CASC1-208ENST00000555240 TJAP1Q5JTD0 557 aa6.94□□□□□ -1.3
CASC1-208ENST00000555240 GFRA3O60609 400 aa6.93□□□□□ -1.3
CASC1-208ENST00000555240 PDE4DQ08499 809 aa6.93□□□□□ -1.3
CASC1-208ENST00000555240 PUS10Q3MIT2 529 aaKnown RBP6.93□□□□□ -1.3
CASC1-208ENST00000555240 BLOC1S3Q6QNY0 202 aa6.93□□□□□ -1.3
CASC1-208ENST00000555240 GIGYF2Q6Y7W6 1299 aaKnown RBP6.93□□□□□ -1.3
CASC1-208ENST00000555240 NR1I2O75469 434 aa6.92□□□□□ -1.3
CASC1-208ENST00000555240 ATP6V1AP38606 617 aa6.92□□□□□ -1.3
CASC1-208ENST00000555240 FUT2Q10981 343 aa6.92□□□□□ -1.3
CASC1-208ENST00000555240 LAPTM4AQ15012 233 aa6.92□□□□□ -1.3
CASC1-208ENST00000555240 NUTM1Q86Y26 1132 aa6.92□□□□□ -1.3
CASC1-208ENST00000555240 PARP9Q8IXQ6 854 aa6.92□□□□□ -1.3
CASC1-208ENST00000555240 TMUB1Q9BVT8 246 aa6.92□□□□□ -1.3
CASC1-208ENST00000555240 REPIN1Q9BWE0 567 aaKnown RBP6.92□□□□□ -1.3
CASC1-208ENST00000555240 KDM4AO75164 1064 aa6.91□□□□□ -1.3
CASC1-208ENST00000555240 ZNF516Q92618 1163 aa6.91□□□□□ -1.3
CASC1-208ENST00000555240 ZPR1O75312 459 aa6.9□□□□□ -1.3
CASC1-208ENST00000555240 USP46P62068 366 aa6.89□□□□□ -1.31
CASC1-208ENST00000555240 MORN1Q5T089 497 aa6.88□□□□□ -1.31
CASC1-208ENST00000555240 SCUBE3Q8IX30 993 aa6.88□□□□□ -1.31
CASC1-208ENST00000555240 BEGAINQ9BUH8 593 aa6.88□□□□□ -1.31
CASC1-208ENST00000555240 MS4A1P11836 297 aa6.87□□□□□ -1.31
CASC1-208ENST00000555240 GGCXP38435 758 aa6.87□□□□□ -1.31
CASC1-208ENST00000555240 NKX2-3Q8TAU0 364 aa6.87□□□□□ -1.31
CASC1-208ENST00000555240 SLC27A5Q9Y2P5 690 aa6.87□□□□□ -1.31
CASC1-208ENST00000555240 TLL1O43897 1013 aa6.86□□□□□ -1.31
CASC1-208ENST00000555240 NRG2O14511 850 aaPredicted RBP6.85□□□□□ -1.31
CASC1-208ENST00000555240 HOXA2O43364 376 aa6.85□□□□□ -1.31
CASC1-208ENST00000555240 FMNL1O95466 1100 aaPredicted RBP6.85□□□□□ -1.31
CASC1-208ENST00000555240 DIXDC1Q155Q3 683 aa6.85□□□□□ -1.31
CASC1-208ENST00000555240 SPIRE2Q8WWL2 714 aa6.85□□□□□ -1.31
CASC1-208ENST00000555240 SPSB2Q99619 263 aa6.85□□□□□ -1.31
CASC1-208ENST00000555240 ADH1BP00325 375 aa6.84□□□□□ -1.31
CASC1-208ENST00000555240 Q3C1V9 767 aa6.84□□□□□ -1.31
CASC1-208ENST00000555240 PPP1R18Q6NYC8 613 aa6.84□□□□□ -1.31
CASC1-208ENST00000555240 PRKD2Q9BZL6 878 aa6.84□□□□□ -1.31
CASC1-208ENST00000555240 GPBP1L1Q9HC44 474 aaPredicted RBP6.84□□□□□ -1.31
CASC1-208ENST00000555240 HLA-CQ95604 372 aa6.83□□□□□ -1.32
CASC1-208ENST00000555240 TBC1D2Q9BYX2 928 aa6.83□□□□□ -1.32
CASC1-208ENST00000555240 KDM4CQ9H3R0 1056 aa6.83□□□□□ -1.32
CASC1-208ENST00000555240 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.83□□□□□ -1.32
CASC1-208ENST00000555240 FDX1P10109 184 aa6.82□□□□□ -1.32
CASC1-208ENST00000555240 GUCA2AQ02747 115 aa6.82□□□□□ -1.32
CASC1-208ENST00000555240 NEUROD2Q15784 382 aa6.82□□□□□ -1.32
CASC1-208ENST00000555240 ZNF787Q6DD87 383 aa6.82□□□□□ -1.32
CASC1-208ENST00000555240 SLC6A16Q9GZN6 736 aa6.82□□□□□ -1.32
CASC1-208ENST00000555240 SALL2Q9Y467 1007 aaPredicted RBP6.82□□□□□ -1.32
CASC1-208ENST00000555240 MOXD2PA6NHM9 499 aa6.81□□□□□ -1.32
CASC1-208ENST00000555240 S1PR4O95977 384 aa6.81□□□□□ -1.32
CASC1-208ENST00000555240 NDUFV2P19404 249 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms