RNA–Protein interactions for RNA: ENST00000555233.5

PRKCH-214, Transcript of protein kinase C eta, humanhuman

TSL 2

Gene PRKCH, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-214ENST00000555233 SETD5Q9C0A6 1442 aa9.41□□□□□ -0.9
PRKCH-214ENST00000555233 CNTLNQ9NXG0 1405 aa9.41□□□□□ -0.9
PRKCH-214ENST00000555233 PIP4P2Q8N4L2 257 aa9.41□□□□□ -0.9
PRKCH-214ENST00000555233 STRCQ7RTU9 1775 aa9.41□□□□□ -0.9
PRKCH-214ENST00000555233 RPRD2Q5VT52 1461 aaKnown RBP9.4□□□□□ -0.9
PRKCH-214ENST00000555233 PTPRTO14522 1441 aa9.4□□□□□ -0.9
PRKCH-214ENST00000555233 KIF3BO15066 747 aa9.4□□□□□ -0.9
PRKCH-214ENST00000555233 TRPM2O94759 1503 aa9.4□□□□□ -0.91
PRKCH-214ENST00000555233 TMEM131LA2VDJ0 1609 aa9.39□□□□□ -0.91
PRKCH-214ENST00000555233 CEP170BQ9Y4F5 1589 aaPredicted RBP9.39□□□□□ -0.91
PRKCH-214ENST00000555233 ITGAEP38570 1179 aa9.39□□□□□ -0.91
PRKCH-214ENST00000555233 ZMYM3Q14202 1370 aa9.38□□□□□ -0.91
PRKCH-214ENST00000555233 IFNLR1Q8IU57 520 aaPredicted RBP9.38□□□□□ -0.91
PRKCH-214ENST00000555233 PKD2Q13563 968 aa9.37□□□□□ -0.91
PRKCH-214ENST00000555233 NEURL4Q96JN8 1562 aa9.37□□□□□ -0.91
PRKCH-214ENST00000555233 SETD1AO15047 1707 aaKnown RBP9.36□□□□□ -0.91
PRKCH-214ENST00000555233 BBXQ8WY36 941 aaPredicted RBP9.36□□□□□ -0.91
PRKCH-214ENST00000555233 POLR1AO95602 1720 aaPredicted RBP9.36□□□□□ -0.91
PRKCH-214ENST00000555233 ADGRB3O60242 1522 aa9.36□□□□□ -0.91
PRKCH-214ENST00000555233 CEBPAP49715 358 aaPredicted RBP9.35□□□□□ -0.91
PRKCH-214ENST00000555233 MLECQ14165 292 aa9.35□□□□□ -0.91
PRKCH-214ENST00000555233 PROM2Q8N271 834 aa9.35□□□□□ -0.91
PRKCH-214ENST00000555233 KDM2AQ9Y2K7 1162 aa9.35□□□□□ -0.91
PRKCH-214ENST00000555233 KIF1BO60333 1816 aa9.35□□□□□ -0.91
PRKCH-214ENST00000555233 PPLO60437 1756 aa9.35□□□□□ -0.91
PRKCH-214ENST00000555233 HRCP23327 699 aa9.34□□□□□ -0.91
PRKCH-214ENST00000555233 TRIM26Q12899 539 aaPredicted RBP9.34□□□□□ -0.91
PRKCH-214ENST00000555233 GGT6Q6P531 493 aa9.34□□□□□ -0.91
PRKCH-214ENST00000555233 NUP155O75694 1391 aa9.34□□□□□ -0.91
PRKCH-214ENST00000555233 NRXN3Q9Y4C0 1643 aa9.34□□□□□ -0.91
PRKCH-214ENST00000555233 ARHGAP23Q9P227 1491 aa9.34□□□□□ -0.91
PRKCH-214ENST00000555233 FBXO31Q5XUX0 539 aaPredicted RBP9.33□□□□□ -0.92
PRKCH-214ENST00000555233 PAXIP1Q6ZW49 1069 aaPredicted RBP9.33□□□□□ -0.92
PRKCH-214ENST00000555233 A2ML1A8K2U0 1454 aa9.33□□□□□ -0.92
PRKCH-214ENST00000555233 ARID4BQ4LE39 1312 aaPredicted RBP9.32□□□□□ -0.92
PRKCH-214ENST00000555233 SLIT1O75093 1534 aa9.32□□□□□ -0.92
PRKCH-214ENST00000555233 CFAP44Q96MT7 982 aa9.32□□□□□ -0.92
PRKCH-214ENST00000555233 DHX57Q6P158 1386 aaKnown RBP9.32□□□□□ -0.92
PRKCH-214ENST00000555233 NLRP1Q9C000 1473 aa9.32□□□□□ -0.92
PRKCH-214ENST00000555233 SPATA31E1Q6ZUB1 1445 aa9.31□□□□□ -0.92
PRKCH-214ENST00000555233 NEXMIFQ5QGS0 1516 aa9.31□□□□□ -0.92
PRKCH-214ENST00000555233 MYT1LQ9UL68 1186 aa9.31□□□□□ -0.92
PRKCH-214ENST00000555233 ANKRD30BQ9BXX2 1392 aa9.31□□□□□ -0.92
PRKCH-214ENST00000555233 ZFYVE9O95405 1425 aa9.31□□□□□ -0.92
PRKCH-214ENST00000555233 STRCP1A6NGW2 1772 aa9.3□□□□□ -0.92
PRKCH-214ENST00000555233 WASHC2CQ9Y4E1 1318 aa9.3□□□□□ -0.92
PRKCH-214ENST00000555233 IQGAP1P46940 1657 aa9.29□□□□□ -0.92
PRKCH-214ENST00000555233 TNRQ92752 1358 aa9.29□□□□□ -0.92
PRKCH-214ENST00000555233 KANK1Q14678 1352 aa9.28□□□□□ -0.92
PRKCH-214ENST00000555233 AKT1S1Q96B36 256 aa9.28□□□□□ -0.92
PRKCH-214ENST00000555233 EVX2Q03828 476 aa9.27□□□□□ -0.93
PRKCH-214ENST00000555233 XIRP1Q702N8 1843 aaKnown RBP9.26□□□□□ -0.93
PRKCH-214ENST00000555233 ASXL1Q8IXJ9 1541 aa9.26□□□□□ -0.93
PRKCH-214ENST00000555233 MPHOSPH9Q99550 1183 aa9.26□□□□□ -0.93
PRKCH-214ENST00000555233 MED14O60244 1454 aa9.26□□□□□ -0.93
PRKCH-214ENST00000555233 UHRF1BP1Q6BDS2 1440 aa9.25□□□□□ -0.93
PRKCH-214ENST00000555233 NRXN1Q9ULB1 1477 aa9.25□□□□□ -0.93
PRKCH-214ENST00000555233 ECM2O94769 699 aaPredicted RBP9.24□□□□□ -0.93
PRKCH-214ENST00000555233 IDI1Q13907 227 aa9.24□□□□□ -0.93
PRKCH-214ENST00000555233 SETBP1Q9Y6X0 1596 aa9.24□□□□□ -0.93
PRKCH-214ENST00000555233 CHD2O14647 1828 aaKnown RBP9.23□□□□□ -0.93
PRKCH-214ENST00000555233 XRN1Q8IZH2 1706 aaKnown RBP9.22□□□□□ -0.93
PRKCH-214ENST00000555233 NBR1Q14596 966 aa9.22□□□□□ -0.93
PRKCH-214ENST00000555233 ILDR1Q86SU0 546 aaPredicted RBP9.22□□□□□ -0.93
PRKCH-214ENST00000555233 PCGF6Q9BYE7 350 aa9.22□□□□□ -0.93
PRKCH-214ENST00000555233 TIMELESSQ9UNS1 1208 aa9.22□□□□□ -0.93
PRKCH-214ENST00000555233 NWD1Q149M9 1564 aa9.21□□□□□ -0.93
PRKCH-214ENST00000555233 FXR2P51116 673 aaKnown RBP eCLIP9.21□□□□□ -0.94
PRKCH-214ENST00000555233 MKRN4PQ13434 485 aaPredicted RBP9.21□□□□□ -0.94
PRKCH-214ENST00000555233 TMEM2Q9UHN6 1383 aa9.21□□□□□ -0.94
PRKCH-214ENST00000555233 ADAMTS13Q76LX8 1427 aa9.21□□□□□ -0.94
PRKCH-214ENST00000555233 MYOM2P54296 1465 aa9.21□□□□□ -0.94
PRKCH-214ENST00000555233 SPRYD3Q8NCJ5 442 aa9.2□□□□□ -0.94
PRKCH-214ENST00000555233 SPOCK2Q92563 424 aa9.2□□□□□ -0.94
PRKCH-214ENST00000555233 SCAF11Q99590 1463 aaKnown RBP9.2□□□□□ -0.94
PRKCH-214ENST00000555233 TRPM1Q7Z4N2 1603 aa9.2□□□□□ -0.94
PRKCH-214ENST00000555233 LTBP4Q8N2S1 1624 aa9.2□□□□□ -0.94
PRKCH-214ENST00000555233 KIAA1210Q9ULL0 1709 aa9.19□□□□□ -0.94
PRKCH-214ENST00000555233 TULP1O00294 542 aaPredicted RBP9.19□□□□□ -0.94
PRKCH-214ENST00000555233 HSPA2P54652 639 aa9.19□□□□□ -0.94
PRKCH-214ENST00000555233 KLHL34Q8N239 644 aa9.19□□□□□ -0.94
PRKCH-214ENST00000555233 ADGRB1O14514 1584 aa9.19□□□□□ -0.94
PRKCH-214ENST00000555233 KNDC1Q76NI1 1749 aa9.19□□□□□ -0.94
PRKCH-214ENST00000555233 CCDC144AA2RUR9 1427 aa9.18□□□□□ -0.94
PRKCH-214ENST00000555233 LTKP29376 864 aa9.18□□□□□ -0.94
PRKCH-214ENST00000555233 TRIM52Q96A61 297 aa9.18□□□□□ -0.94
PRKCH-214ENST00000555233 DAXXQ9UER7 740 aaPredicted RBP9.18□□□□□ -0.94
PRKCH-214ENST00000555233 ACIN1Q9UKV3 1341 aaKnown RBP9.18□□□□□ -0.94
PRKCH-214ENST00000555233 LAMC1P11047 1609 aa9.17□□□□□ -0.94
PRKCH-214ENST00000555233 ALKQ9UM73 1620 aa9.17□□□□□ -0.94
PRKCH-214ENST00000555233 DIP2AQ14689 1571 aa9.17□□□□□ -0.94
PRKCH-214ENST00000555233 PIK3C2GO75747 1445 aa9.17□□□□□ -0.94
PRKCH-214ENST00000555233 PRAG1Q86YV5 1406 aa9.17□□□□□ -0.94
PRKCH-214ENST00000555233 RIMS2Q9UQ26 1411 aa9.17□□□□□ -0.94
PRKCH-214ENST00000555233 TSHZ2Q9NRE2 1034 aa9.17□□□□□ -0.94
PRKCH-214ENST00000555233 SLC52A1Q9NWF4 448 aa9.17□□□□□ -0.94
PRKCH-214ENST00000555233 ERICH6Q7L0X2 663 aa9.16□□□□□ -0.94
PRKCH-214ENST00000555233 ARXQ96QS3 562 aa9.16□□□□□ -0.94
PRKCH-214ENST00000555233 ARHGEF28Q8N1W1 1705 aaKnown RBP9.15□□□□□ -0.94
PRKCH-214ENST00000555233 REM2Q8IYK8 340 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms