RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 SHPRHQ149N8 1683 aa17.24■□□□□ 0.35
PPP4R3A-206ENST00000554943 DIP2CQ9Y2E4 1556 aa17.23■□□□□ 0.35
PPP4R3A-206ENST00000554943 SBNO2Q9Y2G9 1366 aa17.23■□□□□ 0.35
PPP4R3A-206ENST00000554943 NUDCQ9Y266 331 aa17.23■□□□□ 0.35
PPP4R3A-206ENST00000554943 ABCC3O15438 1527 aa17.22■□□□□ 0.35
PPP4R3A-206ENST00000554943 ARHGEF28Q8N1W1 1705 aaKnown RBP17.22■□□□□ 0.35
PPP4R3A-206ENST00000554943 ERVK-7P63135 1459 aa17.22■□□□□ 0.35
PPP4R3A-206ENST00000554943 SPAG9O60271 1321 aaKnown RBP17.22■□□□□ 0.35
PPP4R3A-206ENST00000554943 QRICH2Q9H0J4 1663 aa17.22■□□□□ 0.35
PPP4R3A-206ENST00000554943 PPP4R2Q9NY27 417 aa17.22■□□□□ 0.35
PPP4R3A-206ENST00000554943 NEFLP07196 543 aa17.21■□□□□ 0.35
PPP4R3A-206ENST00000554943 MYT1Q01538 1121 aa17.2■□□□□ 0.34
PPP4R3A-206ENST00000554943 NEO1Q92859 1461 aa17.2■□□□□ 0.34
PPP4R3A-206ENST00000554943 ASXL1Q8IXJ9 1541 aa17.2■□□□□ 0.34
PPP4R3A-206ENST00000554943 FAM9BQ8IZU0 186 aa17.19■□□□□ 0.34
PPP4R3A-206ENST00000554943 RBM19Q9Y4C8 960 aaKnown RBP17.19■□□□□ 0.34
PPP4R3A-206ENST00000554943 PIK3C2GO75747 1445 aa17.19■□□□□ 0.34
PPP4R3A-206ENST00000554943 AFAP1Q8N556 730 aa17.18■□□□□ 0.34
PPP4R3A-206ENST00000554943 NOS1P29475 1434 aa17.17■□□□□ 0.34
PPP4R3A-206ENST00000554943 NEXMIFQ5QGS0 1516 aa17.17■□□□□ 0.34
PPP4R3A-206ENST00000554943 REREQ9P2R6 1566 aa17.17■□□□□ 0.34
PPP4R3A-206ENST00000554943 CLTCQ00610 1675 aaKnown RBP17.16■□□□□ 0.34
PPP4R3A-206ENST00000554943 FANCIQ9NVI1 1328 aa17.16■□□□□ 0.34
PPP4R3A-206ENST00000554943 NLRP13Q86W25 1043 aa17.16■□□□□ 0.34
PPP4R3A-206ENST00000554943 KDM2AQ9Y2K7 1162 aa17.15■□□□□ 0.34
PPP4R3A-206ENST00000554943 ARHGAP31Q2M1Z3 1444 aa17.15■□□□□ 0.34
PPP4R3A-206ENST00000554943 NPATQ14207 1427 aa17.14■□□□□ 0.34
PPP4R3A-206ENST00000554943 ZNF326Q5BKZ1 582 aaKnown RBP17.13■□□□□ 0.33
PPP4R3A-206ENST00000554943 MYO5BQ9ULV0 1848 aa17.12■□□□□ 0.33
PPP4R3A-206ENST00000554943 SETD1AO15047 1707 aaKnown RBP17.12■□□□□ 0.33
PPP4R3A-206ENST00000554943 PREX1Q8TCU6 1659 aa17.12■□□□□ 0.33
PPP4R3A-206ENST00000554943 ZNF521Q96K83 1311 aa17.12■□□□□ 0.33
PPP4R3A-206ENST00000554943 AMER1Q5JTC6 1135 aaPredicted RBP17.12■□□□□ 0.33
PPP4R3A-206ENST00000554943 ANKRD26Q9UPS8 1709 aa17.11■□□□□ 0.33
PPP4R3A-206ENST00000554943 TMEM131LA2VDJ0 1609 aa17.11■□□□□ 0.33
PPP4R3A-206ENST00000554943 SENP3-EIF4A1A0A087X0R7 540 aa17.09■□□□□ 0.33
PPP4R3A-206ENST00000554943 PDE3BQ13370 1112 aa17.09■□□□□ 0.33
PPP4R3A-206ENST00000554943 KANK1Q14678 1352 aa17.09■□□□□ 0.33
PPP4R3A-206ENST00000554943 ZFYVE9O95405 1425 aa17.08■□□□□ 0.32
PPP4R3A-206ENST00000554943 TMF1P82094 1093 aa17.07■□□□□ 0.32
PPP4R3A-206ENST00000554943 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.06■□□□□ 0.323e-6■□□□□ 10
PPP4R3A-206ENST00000554943 CD109Q6YHK3 1445 aa17.06■□□□□ 0.32
PPP4R3A-206ENST00000554943 PANK3Q9H999 370 aa17.05■□□□□ 0.32
PPP4R3A-206ENST00000554943 MSH5O43196 834 aa17.05■□□□□ 0.32
PPP4R3A-206ENST00000554943 RGL3Q3MIN7 710 aa17.05■□□□□ 0.32
PPP4R3A-206ENST00000554943 EIF3AQ14152 1382 aaKnown RBP17.04■□□□□ 0.32
PPP4R3A-206ENST00000554943 TMC1Q8TDI8 760 aa17.03■□□□□ 0.32
PPP4R3A-206ENST00000554943 TULP4Q9NRJ4 1543 aa17.03■□□□□ 0.32
PPP4R3A-206ENST00000554943 IQSEC2Q5JU85 1478 aa17.03■□□□□ 0.32
PPP4R3A-206ENST00000554943 IRX6P78412 446 aaPredicted RBP17.02■□□□□ 0.32
PPP4R3A-206ENST00000554943 ANP32EQ9BTT0 268 aa17.02■□□□□ 0.31
PPP4R3A-206ENST00000554943 TRMT2AQ8IZ69 625 aaKnown RBP17.01■□□□□ 0.31
PPP4R3A-206ENST00000554943 VIRMAQ69YN4 1812 aaKnown RBP17■□□□□ 0.31
PPP4R3A-206ENST00000554943 ADGRB2O60241 1585 aa17■□□□□ 0.31
PPP4R3A-206ENST00000554943 DIP2BQ9P265 1576 aa17■□□□□ 0.31
PPP4R3A-206ENST00000554943 ADGRF5Q8IZF2 1346 aa17■□□□□ 0.31
PPP4R3A-206ENST00000554943 AGLP35573 1532 aa16.98■□□□□ 0.31
PPP4R3A-206ENST00000554943 RRP1P56182 461 aaKnown RBP16.97■□□□□ 0.31
PPP4R3A-206ENST00000554943 PLEKHH1Q9ULM0 1364 aa16.97■□□□□ 0.31
PPP4R3A-206ENST00000554943 PPP2R1AP30153 589 aa16.97■□□□□ 0.31
PPP4R3A-206ENST00000554943 PUS7Q96PZ0 661 aaKnown RBP16.97■□□□□ 0.31
PPP4R3A-206ENST00000554943 RIMBP3CA6NJZ7 1639 aa16.96■□□□□ 0.31
PPP4R3A-206ENST00000554943 RIMBP3BA6NNM3 1639 aa16.96■□□□□ 0.31
PPP4R3A-206ENST00000554943 RIMBP3Q9UFD9 1639 aa16.96■□□□□ 0.31
PPP4R3A-206ENST00000554943 RPGRIP1LQ68CZ1 1315 aa16.96■□□□□ 0.31
PPP4R3A-206ENST00000554943 SLC24A1O60721 1099 aa16.95■□□□□ 0.3
PPP4R3A-206ENST00000554943 C14orf93Q9H972 538 aaKnown RBP16.95■□□□□ 0.3
PPP4R3A-206ENST00000554943 KIF3BO15066 747 aa16.94■□□□□ 0.3
PPP4R3A-206ENST00000554943 CDCA8Q53HL2 280 aa16.94■□□□□ 0.3
PPP4R3A-206ENST00000554943 POLR3AO14802 1390 aaPredicted RBP16.93■□□□□ 0.3
PPP4R3A-206ENST00000554943 CFAP65Q6ZU64 1925 aaKnown RBP16.93■□□□□ 0.3
PPP4R3A-206ENST00000554943 B4GALNT3Q6L9W6 998 aa16.93■□□□□ 0.3
PPP4R3A-206ENST00000554943 PTPRMP28827 1452 aa16.93■□□□□ 0.3
PPP4R3A-206ENST00000554943 CARD14Q9BXL6 1004 aa16.92■□□□□ 0.3
PPP4R3A-206ENST00000554943 NRXN3Q9Y4C0 1643 aa16.92■□□□□ 0.3
PPP4R3A-206ENST00000554943 SPATA31D1Q6ZQQ2 1576 aa16.92■□□□□ 0.3
PPP4R3A-206ENST00000554943 KNDC1Q76NI1 1749 aa16.92■□□□□ 0.3
PPP4R3A-206ENST00000554943 KIF20BQ96Q89 1820 aa16.91■□□□□ 0.3
PPP4R3A-206ENST00000554943 MED14O60244 1454 aa16.91■□□□□ 0.3
PPP4R3A-206ENST00000554943 NLRP1Q9C000 1473 aa16.91■□□□□ 0.3
PPP4R3A-206ENST00000554943 OSCARQ8IYS5 282 aa16.89■□□□□ 0.3
PPP4R3A-206ENST00000554943 CDC42BPGQ6DT37 1551 aa16.89■□□□□ 0.29
PPP4R3A-206ENST00000554943 COL3A1P02461 1466 aaPredicted RBP16.89■□□□□ 0.29
PPP4R3A-206ENST00000554943 CD163L1Q9NR16 1453 aa16.89■□□□□ 0.29
PPP4R3A-206ENST00000554943 CFAP70Q5T0N1 1121 aa16.89■□□□□ 0.29
PPP4R3A-206ENST00000554943 KIF13AQ9H1H9 1805 aa16.89■□□□□ 0.29
PPP4R3A-206ENST00000554943 RCAN3Q9UKA8 241 aa16.88■□□□□ 0.29
PPP4R3A-206ENST00000554943 DLC1Q96QB1 1528 aa16.88■□□□□ 0.29
PPP4R3A-206ENST00000554943 DUSP27Q5VZP5 1158 aa16.88■□□□□ 0.29
PPP4R3A-206ENST00000554943 ADAMTS8Q9UP79 889 aa16.88■□□□□ 0.29
PPP4R3A-206ENST00000554943 NCBP3Q53F19 620 aaKnown RBP16.87■□□□□ 0.29
PPP4R3A-206ENST00000554943 PHF23Q9BUL5 403 aaPredicted RBP16.87■□□□□ 0.29
PPP4R3A-206ENST00000554943 CDCA7LQ96GN5 454 aa16.87■□□□□ 0.29
PPP4R3A-206ENST00000554943 CC2D1BQ5T0F9 858 aaKnown RBP16.86■□□□□ 0.29
PPP4R3A-206ENST00000554943 YEATS2Q9ULM3 1422 aa16.86■□□□□ 0.29
PPP4R3A-206ENST00000554943 KDM2BQ8NHM5 1336 aa16.85■□□□□ 0.29
PPP4R3A-206ENST00000554943 POLR3GLQ9BT43 218 aa16.85■□□□□ 0.29
PPP4R3A-206ENST00000554943 ALKQ9UM73 1620 aa16.84■□□□□ 0.29
PPP4R3A-206ENST00000554943 NSD2O96028 1365 aa16.81■□□□□ 0.28
PPP4R3A-206ENST00000554943 NGEFQ8N5V2 710 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms