RNA–Protein interactions for RNA: ENST00000554877.1

CCDC85C-202, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-202ENST00000554877 TET3O43151 1660 aa18.57■□□□□ 0.56
CCDC85C-202ENST00000554877 GCC2Q8IWJ2 1684 aa18.57■□□□□ 0.56
CCDC85C-202ENST00000554877 ZNF326Q5BKZ1 582 aaKnown RBP18.56■□□□□ 0.56
CCDC85C-202ENST00000554877 STRCP1A6NGW2 1772 aa18.55■□□□□ 0.56
CCDC85C-202ENST00000554877 ADGRB3O60242 1522 aa18.55■□□□□ 0.56
CCDC85C-202ENST00000554877 ILDR2Q71H61 639 aa18.55■□□□□ 0.56
CCDC85C-202ENST00000554877 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.54■□□□□ 0.56
CCDC85C-202ENST00000554877 E9PCH4 1651 aa18.51■□□□□ 0.55
CCDC85C-202ENST00000554877 IQGAP3Q86VI3 1631 aa18.51■□□□□ 0.55
CCDC85C-202ENST00000554877 TMEM94Q12767 1356 aa18.51■□□□□ 0.55
CCDC85C-202ENST00000554877 NAIPQ13075 1403 aa18.5■□□□□ 0.55
CCDC85C-202ENST00000554877 C14orf37Q86TY3 774 aa18.5■□□□□ 0.55
CCDC85C-202ENST00000554877 PLEKHG1Q9ULL1 1385 aa18.48■□□□□ 0.55
CCDC85C-202ENST00000554877 MYO5BQ9ULV0 1848 aa18.48■□□□□ 0.55
CCDC85C-202ENST00000554877 KDM5AP29375 1690 aaKnown RBP18.47■□□□□ 0.55
CCDC85C-202ENST00000554877 SLC4A1APQ9BWU0 796 aaKnown RBP18.47■□□□□ 0.55
CCDC85C-202ENST00000554877 TBX22Q9Y458 520 aa18.47■□□□□ 0.55
CCDC85C-202ENST00000554877 HFM1A2PYH4 1435 aa18.47■□□□□ 0.55
CCDC85C-202ENST00000554877 ZFYVE9O95405 1425 aa18.47■□□□□ 0.55
CCDC85C-202ENST00000554877 TMEM131LA2VDJ0 1609 aa18.46■□□□□ 0.55
CCDC85C-202ENST00000554877 FOXD1Q16676 465 aa18.44■□□□□ 0.54
CCDC85C-202ENST00000554877 ALKQ9UM73 1620 aa18.43■□□□□ 0.54
CCDC85C-202ENST00000554877 PHF23Q9BUL5 403 aaPredicted RBP18.42■□□□□ 0.54
CCDC85C-202ENST00000554877 AMOTL2Q9Y2J4 779 aa18.41■□□□□ 0.54
CCDC85C-202ENST00000554877 MSH6P52701 1360 aa18.41■□□□□ 0.54
CCDC85C-202ENST00000554877 SLAIN2Q9P270 581 aa18.39■□□□□ 0.53
CCDC85C-202ENST00000554877 XIRP1Q702N8 1843 aaKnown RBP18.37■□□□□ 0.53
CCDC85C-202ENST00000554877 ADAMTS13Q76LX8 1427 aa18.37■□□□□ 0.53
CCDC85C-202ENST00000554877 ATF3P18847 181 aa18.35■□□□□ 0.53
CCDC85C-202ENST00000554877 SPHKAPQ2M3C7 1700 aa18.35■□□□□ 0.53
CCDC85C-202ENST00000554877 NKTRP30414 1462 aaKnown RBP18.34■□□□□ 0.53
CCDC85C-202ENST00000554877 SOCS7O14512 581 aa18.34■□□□□ 0.53
CCDC85C-202ENST00000554877 RGL3Q3MIN7 710 aa18.34■□□□□ 0.53
CCDC85C-202ENST00000554877 FAM135BQ49AJ0 1406 aa18.33■□□□□ 0.53
CCDC85C-202ENST00000554877 MPHOSPH9Q99550 1183 aa18.33■□□□□ 0.52
CCDC85C-202ENST00000554877 C19orf44Q9H6X5 657 aa18.32■□□□□ 0.52
CCDC85C-202ENST00000554877 PTPRUQ92729 1446 aa18.32■□□□□ 0.52
CCDC85C-202ENST00000554877 CLTCL1P53675 1640 aa18.31■□□□□ 0.52
CCDC85C-202ENST00000554877 MED1Q15648 1581 aaPredicted RBP18.31■□□□□ 0.52
CCDC85C-202ENST00000554877 CHD2O14647 1828 aaKnown RBP18.31■□□□□ 0.52
CCDC85C-202ENST00000554877 VGFO15240 615 aaPredicted RBP18.31■□□□□ 0.52
CCDC85C-202ENST00000554877 METP08581 1390 aa18.3■□□□□ 0.52
CCDC85C-202ENST00000554877 NWD1Q149M9 1564 aa18.3■□□□□ 0.52
CCDC85C-202ENST00000554877 CADPS2Q86UW7 1296 aa18.3■□□□□ 0.52
CCDC85C-202ENST00000554877 PIK3R4Q99570 1358 aa18.3■□□□□ 0.52
CCDC85C-202ENST00000554877 TRPM2O94759 1503 aa18.28■□□□□ 0.52
CCDC85C-202ENST00000554877 DIP2AQ14689 1571 aa18.25■□□□□ 0.51
CCDC85C-202ENST00000554877 ROBO1Q9Y6N7 1651 aa18.25■□□□□ 0.51
CCDC85C-202ENST00000554877 RPGRIP1LQ68CZ1 1315 aa18.24■□□□□ 0.51
CCDC85C-202ENST00000554877 KIF1BO60333 1816 aa18.24■□□□□ 0.51
CCDC85C-202ENST00000554877 SETD5Q9C0A6 1442 aa18.23■□□□□ 0.51
CCDC85C-202ENST00000554877 NCOA3Q9Y6Q9 1424 aa18.23■□□□□ 0.51
CCDC85C-202ENST00000554877 NEXMIFQ5QGS0 1516 aa18.23■□□□□ 0.51
CCDC85C-202ENST00000554877 STK26Q9P289 416 aa18.22■□□□□ 0.51
CCDC85C-202ENST00000554877 CCDC144AA2RUR9 1427 aa18.22■□□□□ 0.51
CCDC85C-202ENST00000554877 SETBP1Q9Y6X0 1596 aa18.2■□□□□ 0.5
CCDC85C-202ENST00000554877 ADGRF5Q8IZF2 1346 aa18.2■□□□□ 0.5
CCDC85C-202ENST00000554877 NRXN3Q9Y4C0 1643 aa18.2■□□□□ 0.5
CCDC85C-202ENST00000554877 BRINP3Q76B58 766 aa18.19■□□□□ 0.5
CCDC85C-202ENST00000554877 RAB3GAP2Q9H2M9 1393 aa18.18■□□□□ 0.5
CCDC85C-202ENST00000554877 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.18■□□□□ 0.5
CCDC85C-202ENST00000554877 NUTM2BA6NNL0 878 aaPredicted RBP18.18■□□□□ 0.5
CCDC85C-202ENST00000554877 NUTM2EB1AL46 878 aaPredicted RBP18.18■□□□□ 0.5
CCDC85C-202ENST00000554877 MEX3CQ5U5Q3 659 aaKnown RBP18.18■□□□□ 0.5
CCDC85C-202ENST00000554877 NUTM2AQ8IVF1 878 aaPredicted RBP18.18■□□□□ 0.5
CCDC85C-202ENST00000554877 DDX17Q92841 729 aaKnown RBP18.18■□□□□ 0.5
CCDC85C-202ENST00000554877 RGS17Q9UGC6 210 aaPredicted RBP18.18■□□□□ 0.5
CCDC85C-202ENST00000554877 PHLPP1O60346 1717 aa18.17■□□□□ 0.5
CCDC85C-202ENST00000554877 TMEM132EQ6IEE7 984 aa18.16■□□□□ 0.5
CCDC85C-202ENST00000554877 JCADQ9P266 1359 aa18.16■□□□□ 0.5
CCDC85C-202ENST00000554877 POTEAQ6S8J7 498 aa18.13■□□□□ 0.49
CCDC85C-202ENST00000554877 ROBO2Q9HCK4 1378 aa18.13■□□□□ 0.49
CCDC85C-202ENST00000554877 NUTM2FA1L443 756 aa18.12■□□□□ 0.49
CCDC85C-202ENST00000554877 WAPLQ7Z5K2 1190 aa18.12■□□□□ 0.49
CCDC85C-202ENST00000554877 ACIN1Q9UKV3 1341 aaKnown RBP18.12■□□□□ 0.49
CCDC85C-202ENST00000554877 XRN1Q8IZH2 1706 aaKnown RBP18.12■□□□□ 0.49
CCDC85C-202ENST00000554877 HRCP23327 699 aa18.11■□□□□ 0.49
CCDC85C-202ENST00000554877 ORAI2Q96SN7 254 aa18.11■□□□□ 0.49
CCDC85C-202ENST00000554877 KDM2AQ9Y2K7 1162 aa18.11■□□□□ 0.49
CCDC85C-202ENST00000554877 MST1RQ04912 1400 aa18.1■□□□□ 0.49
CCDC85C-202ENST00000554877 ADGRL3Q9HAR2 1447 aa18.1■□□□□ 0.49
CCDC85C-202ENST00000554877 ANKRD30BQ9BXX2 1392 aa18.09■□□□□ 0.49
CCDC85C-202ENST00000554877 SPATA31E1Q6ZUB1 1445 aa18.08■□□□□ 0.49
CCDC85C-202ENST00000554877 LRRC59Q96AG4 307 aaKnown RBP18.08■□□□□ 0.48
CCDC85C-202ENST00000554877 DCCP43146 1447 aa18.07■□□□□ 0.48
CCDC85C-202ENST00000554877 PPLO60437 1756 aa18.07■□□□□ 0.48
CCDC85C-202ENST00000554877 IFT172Q9UG01 1749 aa18.07■□□□□ 0.48
CCDC85C-202ENST00000554877 ESCO1Q5FWF5 840 aa18.07■□□□□ 0.48
CCDC85C-202ENST00000554877 CFAP70Q5T0N1 1121 aa18.07■□□□□ 0.48
CCDC85C-202ENST00000554877 SPATA31A6Q5VVP1 1343 aa18.06■□□□□ 0.48
CCDC85C-202ENST00000554877 SAFB2Q14151 953 aaKnown RBP eCLIP18.06■□□□□ 0.48
CCDC85C-202ENST00000554877 C1orf167Q5SNV9 1468 aa18.05■□□□□ 0.48
CCDC85C-202ENST00000554877 COL16A1Q07092 1604 aaPredicted RBP18.05■□□□□ 0.48
CCDC85C-202ENST00000554877 ASXL1Q8IXJ9 1541 aa18.04■□□□□ 0.48
CCDC85C-202ENST00000554877 PTCH1Q13635 1447 aa18.04■□□□□ 0.48
CCDC85C-202ENST00000554877 XPCQ01831 940 aaPredicted RBP18.03■□□□□ 0.48
CCDC85C-202ENST00000554877 DCAF11Q8TEB1 546 aa18.03■□□□□ 0.48
CCDC85C-202ENST00000554877 SETD1AO15047 1707 aaKnown RBP18.03■□□□□ 0.48
CCDC85C-202ENST00000554877 AHDC1Q5TGY3 1603 aaPredicted RBP18.02■□□□□ 0.48
CCDC85C-202ENST00000554877 C14orf93Q9H972 538 aaKnown RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms