RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 TSR3Q9UJK0 312 aaKnown RBP7.23□□□□□ -1.25
SCFD1-213ENST00000554776 SLF2Q8IX21 1173 aa7.22□□□□□ -1.25
SCFD1-213ENST00000554776 KRI1Q8N9T8 703 aaKnown RBP7.22□□□□□ -1.25
SCFD1-213ENST00000554776 HPS5Q9UPZ3 1129 aa7.22□□□□□ -1.25
SCFD1-213ENST00000554776 TPRNQ4KMQ1 711 aa7.21□□□□□ -1.26
SCFD1-213ENST00000554776 WBP1LQ9NX94 342 aa7.21□□□□□ -1.26
SCFD1-213ENST00000554776 SLC4A3P48751 1232 aa7.2□□□□□ -1.26
SCFD1-213ENST00000554776 NYAP1Q6ZVC0 841 aa7.2□□□□□ -1.26
SCFD1-213ENST00000554776 NLRP7Q8WX94 980 aa7.2□□□□□ -1.26
SCFD1-213ENST00000554776 RNF40O75150 1001 aa7.19□□□□□ -1.26
SCFD1-213ENST00000554776 PPP4CP60510 307 aa7.19□□□□□ -1.26
SCFD1-213ENST00000554776 NECTIN2Q92692 538 aa7.19□□□□□ -1.26
SCFD1-213ENST00000554776 DAXXQ9UER7 740 aaPredicted RBP7.19□□□□□ -1.26
SCFD1-213ENST00000554776 PRKCSHP14314 528 aaPredicted RBP7.17□□□□□ -1.26
SCFD1-213ENST00000554776 AK7Q96M32 723 aa7.17□□□□□ -1.26
SCFD1-213ENST00000554776 SLC24A3Q9HC58 644 aa7.17□□□□□ -1.26
SCFD1-213ENST00000554776 SLC10A3P09131 477 aa7.16□□□□□ -1.26
SCFD1-213ENST00000554776 MDM2Q00987 491 aaPredicted RBP7.16□□□□□ -1.26
SCFD1-213ENST00000554776 AMHR2Q16671 573 aa7.16□□□□□ -1.26
SCFD1-213ENST00000554776 TMUB1Q9BVT8 246 aa7.16□□□□□ -1.26
SCFD1-213ENST00000554776 TRIM66O15016 1216 aa7.15□□□□□ -1.26
SCFD1-213ENST00000554776 APLP1P51693 650 aa7.15□□□□□ -1.26
SCFD1-213ENST00000554776 CLCN1P35523 988 aa7.14□□□□□ -1.27
SCFD1-213ENST00000554776 SULF1Q8IWU6 871 aa7.14□□□□□ -1.27
SCFD1-213ENST00000554776 GPCPD1Q9NPB8 672 aa7.14□□□□□ -1.27
SCFD1-213ENST00000554776 DDX11L8A8MPP1 907 aa7.13□□□□□ -1.27
SCFD1-213ENST00000554776 RSPH4AQ5TD94 716 aa7.13□□□□□ -1.27
SCFD1-213ENST00000554776 REPIN1Q9BWE0 567 aaKnown RBP7.13□□□□□ -1.27
SCFD1-213ENST00000554776 PRR14Q9BWN1 585 aa7.13□□□□□ -1.27
SCFD1-213ENST00000554776 CFHP08603 1231 aa7.12□□□□□ -1.27
SCFD1-213ENST00000554776 ITGBL1O95965 494 aaPredicted RBP7.11□□□□□ -1.27
SCFD1-213ENST00000554776 CD46P15529 392 aa7.11□□□□□ -1.27
SCFD1-213ENST00000554776 KMT5BQ4FZB7 885 aa7.11□□□□□ -1.27
SCFD1-213ENST00000554776 RDH13Q8NBN7 331 aa7.11□□□□□ -1.27
SCFD1-213ENST00000554776 FAM217BQ9NTX9 383 aaPredicted RBP7.11□□□□□ -1.27
SCFD1-213ENST00000554776 ACTN4O43707 911 aaKnown RBP7.1□□□□□ -1.27
SCFD1-213ENST00000554776 PDE4DQ08499 809 aa7.1□□□□□ -1.27
SCFD1-213ENST00000554776 TTLL12Q14166 644 aaPredicted RBP7.1□□□□□ -1.27
SCFD1-213ENST00000554776 PARP9Q8IXQ6 854 aa7.1□□□□□ -1.27
SCFD1-213ENST00000554776 PLA2G2EQ9NZK7 142 aa7.1□□□□□ -1.27
SCFD1-213ENST00000554776 GCGRP47871 477 aa7.09□□□□□ -1.27
SCFD1-213ENST00000554776 GIGYF2Q6Y7W6 1299 aaKnown RBP7.09□□□□□ -1.27
SCFD1-213ENST00000554776 TJAP1Q5JTD0 557 aa7.08□□□□□ -1.28
SCFD1-213ENST00000554776 IFFO2Q5TF58 517 aa7.08□□□□□ -1.28
SCFD1-213ENST00000554776 MTRQ99707 1265 aa7.08□□□□□ -1.28
SCFD1-213ENST00000554776 SSTR3P32745 418 aaPredicted RBP7.07□□□□□ -1.28
SCFD1-213ENST00000554776 IL21Q9HBE4 155 aa7.07□□□□□ -1.28
SCFD1-213ENST00000554776 PCDHB3Q9Y5E6 796 aa7.07□□□□□ -1.28
SCFD1-213ENST00000554776 KCNC4Q03721 635 aa7.05□□□□□ -1.28
SCFD1-213ENST00000554776 FUT2Q10981 343 aa7.05□□□□□ -1.28
SCFD1-213ENST00000554776 BLOC1S3Q6QNY0 202 aa7.05□□□□□ -1.28
SCFD1-213ENST00000554776 MS4A1P11836 297 aa7.04□□□□□ -1.28
SCFD1-213ENST00000554776 COPS2P61201 443 aa7.04□□□□□ -1.28
SCFD1-213ENST00000554776 KDM4AO75164 1064 aa7.03□□□□□ -1.28
SCFD1-213ENST00000554776 ATP6V1AP38606 617 aa7.03□□□□□ -1.28
SCFD1-213ENST00000554776 MORN1Q5T089 497 aa7.03□□□□□ -1.28
SCFD1-213ENST00000554776 ZNF516Q92618 1163 aa7.03□□□□□ -1.28
SCFD1-213ENST00000554776 ZPR1O75312 459 aa7.02□□□□□ -1.29
SCFD1-213ENST00000554776 NR1I2O75469 434 aa7.02□□□□□ -1.29
SCFD1-213ENST00000554776 USP46P62068 366 aa7.02□□□□□ -1.29
SCFD1-213ENST00000554776 PUS10Q3MIT2 529 aaKnown RBP7.02□□□□□ -1.29
SCFD1-213ENST00000554776 GRIPAP1Q4V328 841 aa7.01□□□□□ -1.29
SCFD1-213ENST00000554776 BEGAINQ9BUH8 593 aa7.01□□□□□ -1.29
SCFD1-213ENST00000554776 HOXA2O43364 376 aa7□□□□□ -1.29
SCFD1-213ENST00000554776 NUTM1Q86Y26 1132 aa7□□□□□ -1.29
SCFD1-213ENST00000554776 SCUBE3Q8IX30 993 aa7□□□□□ -1.29
SCFD1-213ENST00000554776 GPBP1L1Q9HC44 474 aaPredicted RBP7□□□□□ -1.29
SCFD1-213ENST00000554776 A0A0G2JS52 829 aa6.99□□□□□ -1.29
SCFD1-213ENST00000554776 SPIRE2Q8WWL2 714 aa6.99□□□□□ -1.29
SCFD1-213ENST00000554776 KDM4CQ9H3R0 1056 aa6.99□□□□□ -1.29
SCFD1-213ENST00000554776 SLC27A5Q9Y2P5 690 aa6.99□□□□□ -1.29
SCFD1-213ENST00000554776 TLL1O43897 1013 aa6.98□□□□□ -1.29
SCFD1-213ENST00000554776 NKX2-3Q8TAU0 364 aa6.98□□□□□ -1.29
SCFD1-213ENST00000554776 THAP11Q96EK4 314 aa6.98□□□□□ -1.29
SCFD1-213ENST00000554776 SALL2Q9Y467 1007 aaPredicted RBP6.98□□□□□ -1.29
SCFD1-213ENST00000554776 ADH1BP00325 375 aa6.97□□□□□ -1.29
SCFD1-213ENST00000554776 BRPF1P55201 1214 aaPredicted RBP6.97□□□□□ -1.29
SCFD1-213ENST00000554776 DIXDC1Q155Q3 683 aa6.97□□□□□ -1.29
SCFD1-213ENST00000554776 HLA-CQ95604 372 aa6.97□□□□□ -1.29
SCFD1-213ENST00000554776 TBC1D2Q9BYX2 928 aa6.97□□□□□ -1.29
SCFD1-213ENST00000554776 MOXD2PA6NHM9 499 aa6.95□□□□□ -1.3
SCFD1-213ENST00000554776 FMNL1O95466 1100 aaPredicted RBP6.95□□□□□ -1.3
SCFD1-213ENST00000554776 GUCA2AQ02747 115 aa6.95□□□□□ -1.3
SCFD1-213ENST00000554776 NEUROD2Q15784 382 aa6.95□□□□□ -1.3
SCFD1-213ENST00000554776 Q3C1V9 767 aa6.95□□□□□ -1.3
SCFD1-213ENST00000554776 BRICD5Q6PL45 260 aa6.95□□□□□ -1.3
SCFD1-213ENST00000554776 SPSB2Q99619 263 aa6.95□□□□□ -1.3
SCFD1-213ENST00000554776 NDUFV2P19404 249 aa6.94□□□□□ -1.3
SCFD1-213ENST00000554776 GJA5P36382 358 aa6.94□□□□□ -1.3
SCFD1-213ENST00000554776 RNF19BQ6ZMZ0 732 aa6.94□□□□□ -1.3
SCFD1-213ENST00000554776 FAM117AQ9C073 453 aa6.94□□□□□ -1.3
SCFD1-213ENST00000554776 FDX1P10109 184 aa6.93□□□□□ -1.3
SCFD1-213ENST00000554776 PPP1R18Q6NYC8 613 aa6.93□□□□□ -1.3
SCFD1-213ENST00000554776 RSBN1LQ6PCB5 846 aaPredicted RBP6.93□□□□□ -1.3
SCFD1-213ENST00000554776 DDRGK1Q96HY6 314 aa6.93□□□□□ -1.3
SCFD1-213ENST00000554776 PCDHGC3Q9UN70 934 aa6.93□□□□□ -1.3
SCFD1-213ENST00000554776 PLEKHG3A1L390 1219 aa6.92□□□□□ -1.3
SCFD1-213ENST00000554776 SPTLC1O15269 473 aa6.92□□□□□ -1.3
SCFD1-213ENST00000554776 GGCXP38435 758 aa6.92□□□□□ -1.3
SCFD1-213ENST00000554776 MSS51Q4VC12 460 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms