RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 THSD4Q6ZMP0 1018 aa8.64□□□□□ -1.03
ATXN3-229ENST00000554672 PLA2G2EQ9NZK7 142 aa8.64□□□□□ -1.03
ATXN3-229ENST00000554672 ADAMTS12P58397 1594 aa8.64□□□□□ -1.03
ATXN3-229ENST00000554672 EN1Q05925 392 aaPredicted RBP8.63□□□□□ -1.03
ATXN3-229ENST00000554672 NBR1Q14596 966 aa8.63□□□□□ -1.03
ATXN3-229ENST00000554672 TSR1Q2NL82 804 aaKnown RBP8.63□□□□□ -1.03
ATXN3-229ENST00000554672 WNT2BQ93097 391 aa8.63□□□□□ -1.03
ATXN3-229ENST00000554672 KIAA1468Q9P260 1216 aa8.63□□□□□ -1.03
ATXN3-229ENST00000554672 MAPKBP1O60336 1514 aa8.63□□□□□ -1.03
ATXN3-229ENST00000554672 ERICH3Q5RHP9 1530 aa8.63□□□□□ -1.03
ATXN3-229ENST00000554672 NBPF3Q9H094 633 aa8.62□□□□□ -1.03
ATXN3-229ENST00000554672 KIF13AQ9H1H9 1805 aa8.6□□□□□ -1.03
ATXN3-229ENST00000554672 GOLGA8CPA6NN73 597 aa8.6□□□□□ -1.03
ATXN3-229ENST00000554672 TRIM6-TRIM34B2RNG4 842 aa8.6□□□□□ -1.03
ATXN3-229ENST00000554672 ONECUT3O60422 494 aaPredicted RBP8.6□□□□□ -1.03
ATXN3-229ENST00000554672 GRXCR2A6NFK2 248 aa8.59□□□□□ -1.03
ATXN3-229ENST00000554672 SUPT5HO00267 1087 aaKnown RBP8.59□□□□□ -1.03
ATXN3-229ENST00000554672 MAP3K7O43318 606 aa8.59□□□□□ -1.03
ATXN3-229ENST00000554672 KDM6BO15054 1643 aa8.58□□□□□ -1.04
ATXN3-229ENST00000554672 DIP2BQ9P265 1576 aa8.58□□□□□ -1.04
ATXN3-229ENST00000554672 PTPRGP23470 1445 aa8.58□□□□□ -1.04
ATXN3-229ENST00000554672 OSBPP22059 807 aa8.58□□□□□ -1.04
ATXN3-229ENST00000554672 TSKSQ9UJT2 592 aa8.58□□□□□ -1.04
ATXN3-229ENST00000554672 LAPTM4BQ86VI4 370 aa8.57□□□□□ -1.04
ATXN3-229ENST00000554672 SEPT9Q9UHD8 586 aaPredicted RBP8.57□□□□□ -1.04
ATXN3-229ENST00000554672 KIAA0586Q9BVV6 1533 aa8.57□□□□□ -1.04
ATXN3-229ENST00000554672 TTBK1Q5TCY1 1321 aaPredicted RBP8.56□□□□□ -1.04
ATXN3-229ENST00000554672 ZFRQ96KR1 1074 aaKnown RBP8.56□□□□□ -1.04
ATXN3-229ENST00000554672 FAM198AQ9UFP1 575 aa8.56□□□□□ -1.04
ATXN3-229ENST00000554672 IGF1RP08069 1367 aa8.56□□□□□ -1.04
ATXN3-229ENST00000554672 TOP2BQ02880 1626 aa8.55□□□□□ -1.04
ATXN3-229ENST00000554672 C3orf80F5H4A9 247 aa8.55□□□□□ -1.04
ATXN3-229ENST00000554672 BCAMP50895 628 aa8.55□□□□□ -1.04
ATXN3-229ENST00000554672 PLB1Q6P1J6 1458 aa8.54□□□□□ -1.04
ATXN3-229ENST00000554672 ANKK1Q8NFD2 765 aa8.54□□□□□ -1.04
ATXN3-229ENST00000554672 KCNV2Q8TDN2 545 aa8.54□□□□□ -1.04
ATXN3-229ENST00000554672 CDHR5Q9HBB8 845 aa8.54□□□□□ -1.04
ATXN3-229ENST00000554672 ADCY10Q96PN6 1610 aa8.54□□□□□ -1.04
ATXN3-229ENST00000554672 ADGRL1O94910 1474 aa8.53□□□□□ -1.04
ATXN3-229ENST00000554672 TNIKQ9UKE5 1360 aa8.53□□□□□ -1.04
ATXN3-229ENST00000554672 SOWAHBA6NEL2 793 aa8.53□□□□□ -1.04
ATXN3-229ENST00000554672 CDCA7LQ96GN5 454 aa8.53□□□□□ -1.04
ATXN3-229ENST00000554672 ASXL2Q76L83 1435 aa8.53□□□□□ -1.04
ATXN3-229ENST00000554672 PRSS12P56730 875 aa8.52□□□□□ -1.05
ATXN3-229ENST00000554672 FAM98CQ17RN3 349 aaKnown RBP8.52□□□□□ -1.05
ATXN3-229ENST00000554672 FBXO41Q8TF61 875 aa8.52□□□□□ -1.05
ATXN3-229ENST00000554672 ARHGEF1Q92888 912 aaKnown RBP8.52□□□□□ -1.05
ATXN3-229ENST00000554672 CARMIL2Q6F5E8 1435 aa8.52□□□□□ -1.05
ATXN3-229ENST00000554672 RUSC2Q8N2Y8 1516 aa8.51□□□□□ -1.05
ATXN3-229ENST00000554672 ABCC2Q92887 1545 aa8.51□□□□□ -1.05
ATXN3-229ENST00000554672 NPDC1Q9NQX5 325 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-229ENST00000554672 COL17A1Q9UMD9 1497 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-229ENST00000554672 BIVM-ERCC5R4GMW8 1640 aa8.51□□□□□ -1.05
ATXN3-229ENST00000554672 MLLT3P42568 568 aaPredicted RBP8.5□□□□□ -1.05
ATXN3-229ENST00000554672 PACS2Q86VP3 889 aa8.5□□□□□ -1.05
ATXN3-229ENST00000554672 WBP1LQ9NX94 342 aa8.5□□□□□ -1.05
ATXN3-229ENST00000554672 KIF27Q86VH2 1401 aa8.49□□□□□ -1.05
ATXN3-229ENST00000554672 SMAPO00193 183 aa8.49□□□□□ -1.05
ATXN3-229ENST00000554672 IFFO2Q5TF58 517 aa8.49□□□□□ -1.05
ATXN3-229ENST00000554672 CERKQ8TCT0 537 aa8.49□□□□□ -1.05
ATXN3-229ENST00000554672 CARMIL1Q5VZK9 1371 aa8.48□□□□□ -1.05
ATXN3-229ENST00000554672 GLI2P10070 1586 aa8.48□□□□□ -1.05
ATXN3-229ENST00000554672 UACAQ9BZF9 1416 aa8.48□□□□□ -1.05
ATXN3-229ENST00000554672 UHRF1BP1LA0JNW5 1464 aa8.47□□□□□ -1.05
ATXN3-229ENST00000554672 TEX14Q8IWB6 1497 aa8.46□□□□□ -1.05
ATXN3-229ENST00000554672 TTC13Q8NBP0 860 aa8.46□□□□□ -1.06
ATXN3-229ENST00000554672 TATDN2Q93075 761 aa8.46□□□□□ -1.06
ATXN3-229ENST00000554672 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-229ENST00000554672 TSPOAP1O95153 1857 aa8.46□□□□□ -1.06
ATXN3-229ENST00000554672 EPRSP07814 1512 aaKnown RBP8.45□□□□□ -1.06
ATXN3-229ENST00000554672 HECW2Q9P2P5 1572 aa8.45□□□□□ -1.06
ATXN3-229ENST00000554672 PLCB2Q00722 1185 aa8.45□□□□□ -1.06
ATXN3-229ENST00000554672 ITGBL1O95965 494 aaPredicted RBP8.44□□□□□ -1.06
ATXN3-229ENST00000554672 LRCH3Q96II8 777 aa8.44□□□□□ -1.06
ATXN3-229ENST00000554672 TSR3Q9UJK0 312 aaKnown RBP8.44□□□□□ -1.06
ATXN3-229ENST00000554672 HPS5Q9UPZ3 1129 aa8.44□□□□□ -1.06
ATXN3-229ENST00000554672 SAMD7Q7Z3H4 446 aa8.43□□□□□ -1.06
ATXN3-229ENST00000554672 RBM27Q9P2N5 1060 aaKnown RBP8.43□□□□□ -1.06
ATXN3-229ENST00000554672 PNMA3Q9UL41 463 aa8.43□□□□□ -1.06
ATXN3-229ENST00000554672 KDM5BQ9UGL1 1544 aa8.43□□□□□ -1.06
ATXN3-229ENST00000554672 PADI6Q6TGC4 694 aa8.42□□□□□ -1.06
ATXN3-229ENST00000554672 NYAP1Q6ZVC0 841 aa8.42□□□□□ -1.06
ATXN3-229ENST00000554672 NUDT18Q6ZVK8 323 aa8.42□□□□□ -1.06
ATXN3-229ENST00000554672 CD109Q6YHK3 1445 aa8.41□□□□□ -1.06
ATXN3-229ENST00000554672 A0A0G2JS52 829 aa8.41□□□□□ -1.06
ATXN3-229ENST00000554672 NBPF26B4DH59 902 aa8.41□□□□□ -1.06
ATXN3-229ENST00000554672 SEMA3EO15041 775 aa8.4□□□□□ -1.06
ATXN3-229ENST00000554672 PPRC1Q5VV67 1664 aaKnown RBP8.4□□□□□ -1.07
ATXN3-229ENST00000554672 DISP1Q96F81 1524 aa8.39□□□□□ -1.07
ATXN3-229ENST00000554672 PTGDRQ13258 359 aa8.38□□□□□ -1.07
ATXN3-229ENST00000554672 EYA1Q99502 592 aa8.38□□□□□ -1.07
ATXN3-229ENST00000554672 CUL7Q14999 1698 aa8.37□□□□□ -1.07
ATXN3-229ENST00000554672 PPP4CP60510 307 aa8.37□□□□□ -1.07
ATXN3-229ENST00000554672 P3H3Q8IVL6 736 aa8.37□□□□□ -1.07
ATXN3-229ENST00000554672 FAM9AQ8IZU1 332 aaPredicted RBP8.37□□□□□ -1.07
ATXN3-229ENST00000554672 MAGI3Q5TCQ9 1506 aa8.37□□□□□ -1.07
ATXN3-229ENST00000554672 WDR7Q9Y4E6 1490 aa8.37□□□□□ -1.07
ATXN3-229ENST00000554672 MAP3K4Q9Y6R4 1608 aa8.36□□□□□ -1.07
ATXN3-229ENST00000554672 IQGAP2Q13576 1575 aa8.35□□□□□ -1.07
ATXN3-229ENST00000554672 KCNC4Q03721 635 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms