RNA–Protein interactions for RNA: ENST00000554546.5

NUMB-212, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NUMB, Length 3,607 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-212ENST00000554546 PLPPR3Q6T4P5 718 aa14.03□□□□□ -0.16
NUMB-212ENST00000554546 PRIMPOLQ96LW4 560 aa14.03□□□□□ -0.16
NUMB-212ENST00000554546 DDX49Q9Y6V7 483 aaKnown RBP14.02□□□□□ -0.16
NUMB-212ENST00000554546 NLRP1Q9C000 1473 aa14.02□□□□□ -0.16
NUMB-212ENST00000554546 LRPPRCP42704 1394 aaKnown RBP14.02□□□□□ -0.17
NUMB-212ENST00000554546 TULP2O00295 520 aa14.02□□□□□ -0.17
NUMB-212ENST00000554546 KIAA2012Q0VF49 1180 aa14.02□□□□□ -0.17
NUMB-212ENST00000554546 PDLIM2Q96JY6 352 aa14.02□□□□□ -0.17
NUMB-212ENST00000554546 YY1AP1Q9H869 796 aa14.02□□□□□ -0.17
NUMB-212ENST00000554546 SLFN14P0C7P3 912 aa14.01□□□□□ -0.17
NUMB-212ENST00000554546 CCDC39Q9UFE4 941 aa14.01□□□□□ -0.17
NUMB-212ENST00000554546 PTMAP06454 111 aaKnown RBP14.01□□□□□ -0.17
NUMB-212ENST00000554546 GABPB1Q06547 395 aaPredicted RBP14.01□□□□□ -0.17
NUMB-212ENST00000554546 HSCBQ8IWL3 235 aa14□□□□□ -0.17
NUMB-212ENST00000554546 ZNF692Q9BU19 519 aaPredicted RBP14□□□□□ -0.17
NUMB-212ENST00000554546 RBSNQ9H1K0 784 aa14□□□□□ -0.17
NUMB-212ENST00000554546 CALCOCO1Q9P1Z2 691 aa14□□□□□ -0.17
NUMB-212ENST00000554546 IGHDP01880 384 aa14□□□□□ -0.17
NUMB-212ENST00000554546 GTF2F1P35269 517 aaKnown RBP eCLIP13.99□□□□□ -0.171e-7■■■■■ 28.8
NUMB-212ENST00000554546 OGFRQ9NZT2 677 aa13.99□□□□□ -0.17
NUMB-212ENST00000554546 L3MBTL2Q969R5 705 aa13.98□□□□□ -0.17
NUMB-212ENST00000554546 TSPYL1Q9H0U9 437 aa13.98□□□□□ -0.17
NUMB-212ENST00000554546 TMX1Q9H3N1 280 aa13.98□□□□□ -0.17
NUMB-212ENST00000554546 FEZ1Q99689 392 aa13.98□□□□□ -0.17
NUMB-212ENST00000554546 MAPK8IP3Q9UPT6 1336 aa13.98□□□□□ -0.17
NUMB-212ENST00000554546 RBM25P49756 843 aaKnown RBP13.97□□□□□ -0.17
NUMB-212ENST00000554546 MPNDQ8N594 471 aa13.97□□□□□ -0.17
NUMB-212ENST00000554546 BANK1Q8NDB2 785 aa13.97□□□□□ -0.17
NUMB-212ENST00000554546 LMOD3Q0VAK6 560 aa13.97□□□□□ -0.17
NUMB-212ENST00000554546 FEZ2Q9UHY8 353 aaPredicted RBP13.97□□□□□ -0.17
NUMB-212ENST00000554546 FOXD4L1Q9NU39 408 aa13.96□□□□□ -0.17
NUMB-212ENST00000554546 SYNJ1O43426 1573 aa13.96□□□□□ -0.18
NUMB-212ENST00000554546 GOLGA6L22H0YM25 854 aa13.96□□□□□ -0.18
NUMB-212ENST00000554546 EFCC1Q9HA90 598 aa13.96□□□□□ -0.18
NUMB-212ENST00000554546 CAVIN1Q6NZI2 390 aaKnown RBP13.95□□□□□ -0.18
NUMB-212ENST00000554546 GTF2A1P52655 376 aaPredicted RBP13.95□□□□□ -0.18
NUMB-212ENST00000554546 MFAP1P55081 439 aaKnown RBP13.95□□□□□ -0.18
NUMB-212ENST00000554546 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.95□□□□□ -0.18
NUMB-212ENST00000554546 C22orf23Q9BZE7 217 aa13.95□□□□□ -0.18
NUMB-212ENST00000554546 TERF2Q15554 542 aa13.94□□□□□ -0.18
NUMB-212ENST00000554546 RSPH14Q9UHP6 348 aa13.94□□□□□ -0.18
NUMB-212ENST00000554546 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.94□□□□□ -0.18
NUMB-212ENST00000554546 PRIM1P49642 420 aaKnown RBP13.94□□□□□ -0.18
NUMB-212ENST00000554546 UACAQ9BZF9 1416 aa13.94□□□□□ -0.18
NUMB-212ENST00000554546 KLHL40Q2TBA0 621 aa13.94□□□□□ -0.18
NUMB-212ENST00000554546 NINLQ9Y2I6 1382 aa13.93□□□□□ -0.18
NUMB-212ENST00000554546 NBPF8Q3BBV2 869 aa13.93□□□□□ -0.18
NUMB-212ENST00000554546 C17orf53Q8N3J3 647 aaPredicted RBP13.93□□□□□ -0.18
NUMB-212ENST00000554546 CCDC18Q5T9S5 1454 aa13.93□□□□□ -0.18
NUMB-212ENST00000554546 BAZ1AQ9NRL2 1556 aaPredicted RBP13.93□□□□□ -0.18
NUMB-212ENST00000554546 RAB3GAP1Q15042 981 aa13.92□□□□□ -0.18
NUMB-212ENST00000554546 SIRT1Q96EB6 747 aa13.92□□□□□ -0.18
NUMB-212ENST00000554546 NOLC1Q14978 699 aaKnown RBP eCLIP13.92□□□□□ -0.18
NUMB-212ENST00000554546 FAM43BQ6ZT52 329 aaPredicted RBP13.92□□□□□ -0.18
NUMB-212ENST00000554546 CARD10Q9BWT7 1032 aa13.92□□□□□ -0.18
NUMB-212ENST00000554546 MYBBP1AQ9BQG0 1328 aaKnown RBP13.92□□□□□ -0.18
NUMB-212ENST00000554546 BRD4O60885 1362 aaPredicted RBP13.92□□□□□ -0.18
NUMB-212ENST00000554546 ZNF445P59923 1031 aa13.92□□□□□ -0.18
NUMB-212ENST00000554546 HSP90AB1P08238 724 aaKnown RBP13.91□□□□□ -0.18
NUMB-212ENST00000554546 ZSCAN23Q3MJ62 389 aa13.91□□□□□ -0.18
NUMB-212ENST00000554546 IBTKQ9P2D0 1353 aaPredicted RBP13.91□□□□□ -0.18
NUMB-212ENST00000554546 ANKRD7Q92527 254 aa13.9□□□□□ -0.18
NUMB-212ENST00000554546 RNF214Q8ND24 703 aa13.9□□□□□ -0.18
NUMB-212ENST00000554546 CT47A1Q5JQC4 288 aaPredicted RBP13.9□□□□□ -0.18
NUMB-212ENST00000554546 TRHP20396 242 aaPredicted RBP13.89□□□□□ -0.19
NUMB-212ENST00000554546 DDIT3P35638 169 aa13.89□□□□□ -0.19
NUMB-212ENST00000554546 GPATCH11Q8N954 259 aa13.89□□□□□ -0.19
NUMB-212ENST00000554546 MYCBPQ99417 103 aaPredicted RBP13.89□□□□□ -0.19
NUMB-212ENST00000554546 GRIPAP1Q4V328 841 aa13.89□□□□□ -0.19
NUMB-212ENST00000554546 SSFA2P28290 1259 aa13.89□□□□□ -0.19
NUMB-212ENST00000554546 RIOK3O14730 519 aaKnown RBP13.88□□□□□ -0.19
NUMB-212ENST00000554546 TOMM22Q9NS69 142 aa13.88□□□□□ -0.19
NUMB-212ENST00000554546 AQRO60306 1485 aaKnown RBP eCLIP13.88□□□□□ -0.191e-6■■■□□ 18.1
NUMB-212ENST00000554546 CIZ1Q9ULV3 898 aaPredicted RBP13.88□□□□□ -0.19
NUMB-212ENST00000554546 PIBF1Q8WXW3 757 aa13.87□□□□□ -0.19
NUMB-212ENST00000554546 ATP1B4Q9UN42 357 aaPredicted RBP13.87□□□□□ -0.19
NUMB-212ENST00000554546 HNRNPH2P55795 449 aaKnown RBP13.87□□□□□ -0.19
NUMB-212ENST00000554546 SMC4Q9NTJ3 1288 aa13.87□□□□□ -0.19
NUMB-212ENST00000554546 RAD51AP2Q09MP3 1159 aa13.87□□□□□ -0.19
NUMB-212ENST00000554546 CTNNA3Q9UI47 895 aa13.87□□□□□ -0.19
NUMB-212ENST00000554546 DHX16O60231 1041 aaKnown RBP13.86□□□□□ -0.19
NUMB-212ENST00000554546 CHAF1AQ13111 956 aaPredicted RBP13.86□□□□□ -0.19
NUMB-212ENST00000554546 NOP2P46087 812 aaKnown RBP13.86□□□□□ -0.19
NUMB-212ENST00000554546 EGFL6Q8IUX8 553 aa13.86□□□□□ -0.19
NUMB-212ENST00000554546 VIRMAQ69YN4 1812 aaKnown RBP13.86□□□□□ -0.19
NUMB-212ENST00000554546 NCAPGQ9BPX3 1015 aa13.85□□□□□ -0.19
NUMB-212ENST00000554546 DDX41Q9UJV9 622 aaKnown RBP13.85□□□□□ -0.19
NUMB-212ENST00000554546 MCTP1Q6DN14 999 aa13.85□□□□□ -0.19
NUMB-212ENST00000554546 SMC5Q8IY18 1101 aa13.85□□□□□ -0.19
NUMB-212ENST00000554546 DIAPH3Q9NSV4 1193 aa13.85□□□□□ -0.19
NUMB-212ENST00000554546 RBM27Q9P2N5 1060 aaKnown RBP13.85□□□□□ -0.19
NUMB-212ENST00000554546 ABCA5Q8WWZ7 1642 aa13.85□□□□□ -0.19
NUMB-212ENST00000554546 KIF15Q9NS87 1388 aa13.84□□□□□ -0.19
NUMB-212ENST00000554546 SPATA31E1Q6ZUB1 1445 aa13.84□□□□□ -0.19
NUMB-212ENST00000554546 BAG4O95429 457 aaKnown RBP13.84□□□□□ -0.19
NUMB-212ENST00000554546 TTC12Q9H892 705 aaPredicted RBP13.84□□□□□ -0.19
NUMB-212ENST00000554546 CEP83Q9Y592 693 aa13.84□□□□□ -0.19
NUMB-212ENST00000554546 GYS2P54840 703 aa13.83□□□□□ -0.19
NUMB-212ENST00000554546 BRPF1P55201 1214 aaPredicted RBP13.83□□□□□ -0.19
NUMB-212ENST00000554546 RASSF4Q9H2L5 321 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms