RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 PIK3C2GO75747 1445 aa9.96□□□□□ -0.81
LINC00517-202ENST00000554257 PRAG1Q86YV5 1406 aa9.96□□□□□ -0.81
LINC00517-202ENST00000554257 MED14O60244 1454 aa9.96□□□□□ -0.82
LINC00517-202ENST00000554257 CHD2O14647 1828 aaKnown RBP9.96□□□□□ -0.82
LINC00517-202ENST00000554257 XRN1Q8IZH2 1706 aaKnown RBP9.95□□□□□ -0.82
LINC00517-202ENST00000554257 RALGAPBQ86X10 1494 aa9.95□□□□□ -0.82
LINC00517-202ENST00000554257 MLECQ14165 292 aa9.94□□□□□ -0.82
LINC00517-202ENST00000554257 DIP2AQ14689 1571 aa9.94□□□□□ -0.82
LINC00517-202ENST00000554257 IDI1Q13907 227 aa9.93□□□□□ -0.82
LINC00517-202ENST00000554257 ALKQ9UM73 1620 aa9.93□□□□□ -0.82
LINC00517-202ENST00000554257 XIRP1Q702N8 1843 aaKnown RBP9.93□□□□□ -0.82
LINC00517-202ENST00000554257 CCER1Q8TC90 406 aaPredicted RBP9.93□□□□□ -0.82
LINC00517-202ENST00000554257 ARID4BQ4LE39 1312 aaPredicted RBP9.93□□□□□ -0.82
LINC00517-202ENST00000554257 CEBPAP49715 358 aaPredicted RBP9.92□□□□□ -0.82
LINC00517-202ENST00000554257 TIMELESSQ9UNS1 1208 aa9.92□□□□□ -0.82
LINC00517-202ENST00000554257 NWD1Q149M9 1564 aa9.92□□□□□ -0.82
LINC00517-202ENST00000554257 SLC52A1Q9NWF4 448 aa9.91□□□□□ -0.82
LINC00517-202ENST00000554257 GPRASP1Q5JY77 1395 aa9.9□□□□□ -0.82
LINC00517-202ENST00000554257 L3MBTL2Q969R5 705 aa9.9□□□□□ -0.83
LINC00517-202ENST00000554257 QRICH2Q9H0J4 1663 aa9.89□□□□□ -0.83
LINC00517-202ENST00000554257 CPS1P31327 1500 aa9.89□□□□□ -0.83
LINC00517-202ENST00000554257 NBPF8Q3BBV2 869 aa9.89□□□□□ -0.83
LINC00517-202ENST00000554257 TMEM2Q9UHN6 1383 aa9.89□□□□□ -0.83
LINC00517-202ENST00000554257 ADAMTS13Q76LX8 1427 aa9.88□□□□□ -0.83
LINC00517-202ENST00000554257 RIMS2Q9UQ26 1411 aa9.88□□□□□ -0.83
LINC00517-202ENST00000554257 PPP1R15AO75807 674 aaPredicted RBP9.88□□□□□ -0.83
LINC00517-202ENST00000554257 MYOM1P52179 1685 aa9.88□□□□□ -0.83
LINC00517-202ENST00000554257 RPGRIP1LQ68CZ1 1315 aa9.87□□□□□ -0.83
LINC00517-202ENST00000554257 SCAF11Q99590 1463 aaKnown RBP9.86□□□□□ -0.83
LINC00517-202ENST00000554257 DLC1Q96QB1 1528 aa9.86□□□□□ -0.83
LINC00517-202ENST00000554257 ADGRF5Q8IZF2 1346 aa9.85□□□□□ -0.83
LINC00517-202ENST00000554257 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.85□□□□□ -0.83
LINC00517-202ENST00000554257 PLEKHG1Q9ULL1 1385 aa9.85□□□□□ -0.83
LINC00517-202ENST00000554257 NALCNQ8IZF0 1738 aa9.85□□□□□ -0.83
LINC00517-202ENST00000554257 ADGRB2O60241 1585 aa9.85□□□□□ -0.83
LINC00517-202ENST00000554257 TONSLQ96HA7 1378 aa9.85□□□□□ -0.83
LINC00517-202ENST00000554257 NEUROD1Q13562 356 aa9.84□□□□□ -0.83
LINC00517-202ENST00000554257 TOPAZ1Q8N9V7 1692 aa9.84□□□□□ -0.83
LINC00517-202ENST00000554257 TECPR2O15040 1411 aa9.83□□□□□ -0.84
LINC00517-202ENST00000554257 PTPRUQ92729 1446 aa9.83□□□□□ -0.84
LINC00517-202ENST00000554257 LTKP29376 864 aa9.82□□□□□ -0.84
LINC00517-202ENST00000554257 STAC3Q96MF2 364 aa9.82□□□□□ -0.84
LINC00517-202ENST00000554257 USP32Q8NFA0 1604 aa9.81□□□□□ -0.84
LINC00517-202ENST00000554257 ZEB1P37275 1124 aaPredicted RBP9.81□□□□□ -0.84
LINC00517-202ENST00000554257 RGPD8O14715 1765 aaPredicted RBP9.79□□□□□ -0.84
LINC00517-202ENST00000554257 ESF1Q9H501 851 aaKnown RBP9.79□□□□□ -0.84
LINC00517-202ENST00000554257 C14orf93Q9H972 538 aaKnown RBP9.79□□□□□ -0.84
LINC00517-202ENST00000554257 DCAF11Q8TEB1 546 aa9.79□□□□□ -0.84
LINC00517-202ENST00000554257 FMN2Q9NZ56 1722 aa9.79□□□□□ -0.84
LINC00517-202ENST00000554257 METP08581 1390 aa9.78□□□□□ -0.84
LINC00517-202ENST00000554257 TULP4Q9NRJ4 1543 aa9.78□□□□□ -0.84
LINC00517-202ENST00000554257 AKAP12Q02952 1782 aa9.77□□□□□ -0.85
LINC00517-202ENST00000554257 RGL3Q3MIN7 710 aa9.77□□□□□ -0.85
LINC00517-202ENST00000554257 NPHP4O75161 1426 aaPredicted RBP9.77□□□□□ -0.85
LINC00517-202ENST00000554257 NBPF1Q3BBV0 1214 aa9.77□□□□□ -0.85
LINC00517-202ENST00000554257 PTCH1Q13635 1447 aa9.77□□□□□ -0.85
LINC00517-202ENST00000554257 YTHDC2Q9H6S0 1430 aaKnown RBP9.76□□□□□ -0.85
LINC00517-202ENST00000554257 LTBP4Q8N2S1 1624 aa9.76□□□□□ -0.85
LINC00517-202ENST00000554257 MARF1Q9Y4F3 1742 aaKnown RBP9.74□□□□□ -0.85
LINC00517-202ENST00000554257 NRKQ7Z2Y5 1582 aa9.74□□□□□ -0.85
LINC00517-202ENST00000554257 THEMISQ8N1K5 641 aaPredicted RBP9.74□□□□□ -0.85
LINC00517-202ENST00000554257 PIK3R4Q99570 1358 aa9.74□□□□□ -0.85
LINC00517-202ENST00000554257 ITSN1Q15811 1721 aa9.74□□□□□ -0.85
LINC00517-202ENST00000554257 VGFO15240 615 aaPredicted RBP9.74□□□□□ -0.85
LINC00517-202ENST00000554257 CFAP70Q5T0N1 1121 aa9.74□□□□□ -0.85
LINC00517-202ENST00000554257 LRPPRCP42704 1394 aaKnown RBP9.74□□□□□ -0.85
LINC00517-202ENST00000554257 SBNO2Q9Y2G9 1366 aa9.74□□□□□ -0.85
LINC00517-202ENST00000554257 FAM135BQ49AJ0 1406 aa9.74□□□□□ -0.85
LINC00517-202ENST00000554257 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.73□□□□□ -0.85
LINC00517-202ENST00000554257 MON2Q7Z3U7 1717 aa9.73□□□□□ -0.85
LINC00517-202ENST00000554257 NKTRP30414 1462 aaKnown RBP9.73□□□□□ -0.85
LINC00517-202ENST00000554257 CDC42BPGQ6DT37 1551 aa9.73□□□□□ -0.85
LINC00517-202ENST00000554257 ABCC11Q96J66 1382 aa9.73□□□□□ -0.85
LINC00517-202ENST00000554257 USP54Q70EL1 1684 aa9.72□□□□□ -0.85
LINC00517-202ENST00000554257 ROCK2O75116 1388 aaKnown RBP9.72□□□□□ -0.85
LINC00517-202ENST00000554257 USP47Q96K76 1375 aa9.72□□□□□ -0.85
LINC00517-202ENST00000554257 NUTM2DQ5VT03 806 aaPredicted RBP9.72□□□□□ -0.85
LINC00517-202ENST00000554257 KDM2AQ9Y2K7 1162 aa9.72□□□□□ -0.85
LINC00517-202ENST00000554257 TESK2Q96S53 571 aa9.71□□□□□ -0.85
LINC00517-202ENST00000554257 ZNF326Q5BKZ1 582 aaKnown RBP9.71□□□□□ -0.86
LINC00517-202ENST00000554257 ANKRD26Q9UPS8 1709 aa9.7□□□□□ -0.86
LINC00517-202ENST00000554257 ROBO2Q9HCK4 1378 aa9.7□□□□□ -0.86
LINC00517-202ENST00000554257 NCKAP5LQ9HCH0 1330 aa9.7□□□□□ -0.86
LINC00517-202ENST00000554257 TBX22Q9Y458 520 aa9.7□□□□□ -0.86
LINC00517-202ENST00000554257 TXNDC2Q86VQ3 553 aa9.7□□□□□ -0.86
LINC00517-202ENST00000554257 CHGAP10645 457 aaKnown RBP9.69□□□□□ -0.86
LINC00517-202ENST00000554257 PLEKHH1Q9ULM0 1364 aa9.69□□□□□ -0.86
LINC00517-202ENST00000554257 SIRT1Q96EB6 747 aa9.69□□□□□ -0.86
LINC00517-202ENST00000554257 CRYBG1Q9Y4K1 1723 aa9.68□□□□□ -0.86
LINC00517-202ENST00000554257 TRPM3Q9HCF6 1732 aaPredicted RBP9.68□□□□□ -0.86
LINC00517-202ENST00000554257 C11orf95C9JLR9 678 aaPredicted RBP9.68□□□□□ -0.86
LINC00517-202ENST00000554257 PLPPR3Q6T4P5 718 aa9.68□□□□□ -0.86
LINC00517-202ENST00000554257 LRRC7Q96NW7 1537 aa9.68□□□□□ -0.86
LINC00517-202ENST00000554257 KIF20BQ96Q89 1820 aa9.67□□□□□ -0.86
LINC00517-202ENST00000554257 DISP3Q9P2K9 1392 aa9.67□□□□□ -0.86
LINC00517-202ENST00000554257 HSPA2P54652 639 aa9.67□□□□□ -0.86
LINC00517-202ENST00000554257 ANKLE2Q86XL3 938 aa9.67□□□□□ -0.86
LINC00517-202ENST00000554257 CD163L1Q9NR16 1453 aa9.67□□□□□ -0.86
LINC00517-202ENST00000554257 HSPA5P11021 654 aaKnown RBP9.66□□□□□ -0.86
LINC00517-202ENST00000554257 TMEM132EQ6IEE7 984 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms