RNA–Protein interactions for RNA: ENST00000554035.5

RDH11-206, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 849 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-206ENST00000554035 LAMC1P11047 1609 aa12.63□□□□□ -0.39
RDH11-206ENST00000554035 MLECQ14165 292 aa12.63□□□□□ -0.39
RDH11-206ENST00000554035 ESF1Q9H501 851 aaKnown RBP12.63□□□□□ -0.39
RDH11-206ENST00000554035 ZMYM3Q14202 1370 aa12.63□□□□□ -0.39
RDH11-206ENST00000554035 GPRASP1Q5JY77 1395 aa12.63□□□□□ -0.39
RDH11-206ENST00000554035 MADDQ8WXG6 1647 aa12.62□□□□□ -0.39
RDH11-206ENST00000554035 CFAP65Q6ZU64 1925 aaKnown RBP12.62□□□□□ -0.39
RDH11-206ENST00000554035 NRXN1Q9ULB1 1477 aa12.61□□□□□ -0.39
RDH11-206ENST00000554035 HSPA5P11021 654 aaKnown RBP12.61□□□□□ -0.39
RDH11-206ENST00000554035 IDI1Q13907 227 aa12.61□□□□□ -0.39
RDH11-206ENST00000554035 MIER1Q8N108 512 aa12.61□□□□□ -0.39
RDH11-206ENST00000554035 KIAA1210Q9ULL0 1709 aa12.6□□□□□ -0.39
RDH11-206ENST00000554035 TMEM131LA2VDJ0 1609 aa12.6□□□□□ -0.39
RDH11-206ENST00000554035 ZNF326Q5BKZ1 582 aaKnown RBP12.6□□□□□ -0.39
RDH11-206ENST00000554035 FBXO31Q5XUX0 539 aaPredicted RBP12.6□□□□□ -0.39
RDH11-206ENST00000554035 PPLO60437 1756 aa12.6□□□□□ -0.39
RDH11-206ENST00000554035 ROCK2O75116 1388 aaKnown RBP12.58□□□□□ -0.4
RDH11-206ENST00000554035 ZFYVE9O95405 1425 aa12.58□□□□□ -0.4
RDH11-206ENST00000554035 NEXMIFQ5QGS0 1516 aa12.57□□□□□ -0.4
RDH11-206ENST00000554035 USP47Q96K76 1375 aa12.57□□□□□ -0.4
RDH11-206ENST00000554035 FER1L4A9Z1Z3 1794 aa12.57□□□□□ -0.4
RDH11-206ENST00000554035 CARD11Q9BXL7 1154 aa12.57□□□□□ -0.4
RDH11-206ENST00000554035 KDM5AP29375 1690 aaKnown RBP12.57□□□□□ -0.4
RDH11-206ENST00000554035 TNRQ92752 1358 aa12.56□□□□□ -0.4
RDH11-206ENST00000554035 CHGAP10645 457 aaKnown RBP12.56□□□□□ -0.4
RDH11-206ENST00000554035 ADGRF5Q8IZF2 1346 aa12.55□□□□□ -0.4
RDH11-206ENST00000554035 C3P01024 1663 aa12.54□□□□□ -0.4
RDH11-206ENST00000554035 PIK3C2GO75747 1445 aa12.54□□□□□ -0.4
RDH11-206ENST00000554035 A2ML1A8K2U0 1454 aa12.54□□□□□ -0.4
RDH11-206ENST00000554035 VGFO15240 615 aaPredicted RBP12.54□□□□□ -0.4
RDH11-206ENST00000554035 NBPF1Q3BBV0 1214 aa12.54□□□□□ -0.4
RDH11-206ENST00000554035 ADAMTSL3P82987 1691 aa12.54□□□□□ -0.4
RDH11-206ENST00000554035 NLRP1Q9C000 1473 aa12.53□□□□□ -0.4
RDH11-206ENST00000554035 SETBP1Q9Y6X0 1596 aa12.53□□□□□ -0.4
RDH11-206ENST00000554035 MYO5BQ9ULV0 1848 aa12.53□□□□□ -0.4
RDH11-206ENST00000554035 IQGAP1P46940 1657 aa12.52□□□□□ -0.4
RDH11-206ENST00000554035 HIRIP3Q9BW71 556 aaPredicted RBP12.52□□□□□ -0.41
RDH11-206ENST00000554035 POLR1AO95602 1720 aaPredicted RBP12.51□□□□□ -0.41
RDH11-206ENST00000554035 SCAF11Q99590 1463 aaKnown RBP12.51□□□□□ -0.41
RDH11-206ENST00000554035 CENPBP07199 599 aaPredicted RBP12.5□□□□□ -0.41
RDH11-206ENST00000554035 DDX10Q13206 875 aaKnown RBP12.5□□□□□ -0.41
RDH11-206ENST00000554035 C14orf93Q9H972 538 aaKnown RBP12.5□□□□□ -0.41
RDH11-206ENST00000554035 CCDC7Q96M83 1385 aa12.5□□□□□ -0.41
RDH11-206ENST00000554035 WASHC2AQ641Q2 1341 aa12.49□□□□□ -0.41
RDH11-206ENST00000554035 CFAP70Q5T0N1 1121 aa12.49□□□□□ -0.41
RDH11-206ENST00000554035 STAG3Q9UJ98 1225 aa12.49□□□□□ -0.41
RDH11-206ENST00000554035 UBR1Q8IWV7 1749 aa12.48□□□□□ -0.41
RDH11-206ENST00000554035 ADGRB1O14514 1584 aa12.48□□□□□ -0.41
RDH11-206ENST00000554035 RIMS2Q9UQ26 1411 aa12.48□□□□□ -0.41
RDH11-206ENST00000554035 ST20-MTHFSA0A0A6YYL1 179 aa12.48□□□□□ -0.41
RDH11-206ENST00000554035 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.48□□□□□ -0.41
RDH11-206ENST00000554035 RIMS1Q86UR5 1692 aaKnown RBP12.48□□□□□ -0.41
RDH11-206ENST00000554035 C11orf95C9JLR9 678 aaPredicted RBP12.47□□□□□ -0.41
RDH11-206ENST00000554035 CEBPAP49715 358 aaPredicted RBP12.47□□□□□ -0.41
RDH11-206ENST00000554035 EIF3AQ14152 1382 aaKnown RBP12.46□□□□□ -0.41
RDH11-206ENST00000554035 KIF7Q2M1P5 1343 aa12.46□□□□□ -0.41
RDH11-206ENST00000554035 HDGFP51858 240 aaKnown RBP12.46□□□□□ -0.41
RDH11-206ENST00000554035 CCER2I3L3R5 266 aa12.45□□□□□ -0.42
RDH11-206ENST00000554035 SLC24A1O60721 1099 aa12.45□□□□□ -0.42
RDH11-206ENST00000554035 TESK2Q96S53 571 aa12.45□□□□□ -0.42
RDH11-206ENST00000554035 MYO3AQ8NEV4 1616 aa12.44□□□□□ -0.42
RDH11-206ENST00000554035 TMEM2Q9UHN6 1383 aa12.44□□□□□ -0.42
RDH11-206ENST00000554035 SLIT1O75093 1534 aa12.43□□□□□ -0.42
RDH11-206ENST00000554035 ARHGAP23Q9P227 1491 aa12.43□□□□□ -0.42
RDH11-206ENST00000554035 KCNA4P22459 653 aa12.43□□□□□ -0.42
RDH11-206ENST00000554035 ALKQ9UM73 1620 aa12.43□□□□□ -0.42
RDH11-206ENST00000554035 SBNO2Q9Y2G9 1366 aa12.43□□□□□ -0.42
RDH11-206ENST00000554035 ASXL1Q8IXJ9 1541 aa12.42□□□□□ -0.42
RDH11-206ENST00000554035 ANP32CO43423 234 aa12.41□□□□□ -0.42
RDH11-206ENST00000554035 NUTM2DQ5VT03 806 aaPredicted RBP12.41□□□□□ -0.42
RDH11-206ENST00000554035 U3KPZ7 1027 aaPredicted RBP12.41□□□□□ -0.42
RDH11-206ENST00000554035 SETD1AO15047 1707 aaKnown RBP12.4□□□□□ -0.42
RDH11-206ENST00000554035 CEP170BQ9Y4F5 1589 aaPredicted RBP12.4□□□□□ -0.42
RDH11-206ENST00000554035 TMF1P82094 1093 aa12.4□□□□□ -0.42
RDH11-206ENST00000554035 THEMISQ8N1K5 641 aaPredicted RBP12.4□□□□□ -0.42
RDH11-206ENST00000554035 ZNF142P52746 1687 aaPredicted RBP12.4□□□□□ -0.42
RDH11-206ENST00000554035 NRXN3Q9Y4C0 1643 aa12.4□□□□□ -0.42
RDH11-206ENST00000554035 PLEKHG1Q9ULL1 1385 aa12.39□□□□□ -0.43
RDH11-206ENST00000554035 PTPRMP28827 1452 aa12.39□□□□□ -0.43
RDH11-206ENST00000554035 CDCA8Q53HL2 280 aa12.38□□□□□ -0.43
RDH11-206ENST00000554035 SETD1BQ9UPS6 1966 aaKnown RBP12.38□□□□□ -0.43
RDH11-206ENST00000554035 CENPJQ9HC77 1338 aaPredicted RBP12.37□□□□□ -0.43
RDH11-206ENST00000554035 DLC1Q96QB1 1528 aa12.37□□□□□ -0.43
RDH11-206ENST00000554035 ARHGEF28Q8N1W1 1705 aaKnown RBP12.37□□□□□ -0.43
RDH11-206ENST00000554035 TMEM132EQ6IEE7 984 aa12.37□□□□□ -0.43
RDH11-206ENST00000554035 DISP3Q9P2K9 1392 aa12.37□□□□□ -0.43
RDH11-206ENST00000554035 YTHDC2Q9H6S0 1430 aaKnown RBP12.37□□□□□ -0.43
RDH11-206ENST00000554035 LRPPRCP42704 1394 aaKnown RBP12.36□□□□□ -0.43
RDH11-206ENST00000554035 TRAK1Q9UPV9 953 aa12.36□□□□□ -0.43
RDH11-206ENST00000554035 EID1Q9Y6B2 187 aa12.36□□□□□ -0.43
RDH11-206ENST00000554035 MED14O60244 1454 aa12.35□□□□□ -0.43
RDH11-206ENST00000554035 ABCC11Q96J66 1382 aa12.35□□□□□ -0.43
RDH11-206ENST00000554035 LTKP29376 864 aa12.35□□□□□ -0.43
RDH11-206ENST00000554035 TXNDC2Q86VQ3 553 aa12.35□□□□□ -0.43
RDH11-206ENST00000554035 ADAMTS13Q76LX8 1427 aa12.35□□□□□ -0.43
RDH11-206ENST00000554035 QRICH2Q9H0J4 1663 aa12.35□□□□□ -0.43
RDH11-206ENST00000554035 PUS7Q96PZ0 661 aaKnown RBP12.34□□□□□ -0.43
RDH11-206ENST00000554035 DIP2AQ14689 1571 aa12.34□□□□□ -0.43
RDH11-206ENST00000554035 SIRT1Q96EB6 747 aa12.33□□□□□ -0.44
RDH11-206ENST00000554035 TECPR2O15040 1411 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms