RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 NBPF8Q3BBV2 869 aa14.82□□□□□ -0.04
TMEM55B-205ENST00000554028 KIF1BO60333 1816 aa14.82□□□□□ -0.04
TMEM55B-205ENST00000554028 NLRP1Q9C000 1473 aa14.82□□□□□ -0.04
TMEM55B-205ENST00000554028 ADAMTSL3P82987 1691 aa14.81□□□□□ -0.04
TMEM55B-205ENST00000554028 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.81□□□□□ -0.04
TMEM55B-205ENST00000554028 UHRF1BP1Q6BDS2 1440 aa14.81□□□□□ -0.04
TMEM55B-205ENST00000554028 ADGRB3O60242 1522 aa14.81□□□□□ -0.04
TMEM55B-205ENST00000554028 PIK3C2BO00750 1634 aa14.81□□□□□ -0.04
TMEM55B-205ENST00000554028 CNKSR2Q8WXI2 1034 aa14.8□□□□□ -0.04
TMEM55B-205ENST00000554028 RIMS1Q86UR5 1692 aaKnown RBP14.79□□□□□ -0.04
TMEM55B-205ENST00000554028 THEMISQ8N1K5 641 aaPredicted RBP14.79□□□□□ -0.04
TMEM55B-205ENST00000554028 C3P01024 1663 aa14.78□□□□□ -0.04
TMEM55B-205ENST00000554028 PRAG1Q86YV5 1406 aa14.78□□□□□ -0.04
TMEM55B-205ENST00000554028 PTPRMP28827 1452 aa14.76□□□□□ -0.05
TMEM55B-205ENST00000554028 MYOM2P54296 1465 aa14.76□□□□□ -0.05
TMEM55B-205ENST00000554028 ZNF316A6NFI3 1004 aaPredicted RBP14.76□□□□□ -0.05
TMEM55B-205ENST00000554028 EIF4G2P78344 907 aaKnown RBP eCLIP14.76□□□□□ -0.05
TMEM55B-205ENST00000554028 CARD11Q9BXL7 1154 aa14.76□□□□□ -0.05
TMEM55B-205ENST00000554028 EID1Q9Y6B2 187 aa14.76□□□□□ -0.05
TMEM55B-205ENST00000554028 A2ML1A8K2U0 1454 aa14.76□□□□□ -0.05
TMEM55B-205ENST00000554028 ROCK2O75116 1388 aaKnown RBP14.75□□□□□ -0.05
TMEM55B-205ENST00000554028 ADGRF5Q8IZF2 1346 aa14.75□□□□□ -0.05
TMEM55B-205ENST00000554028 TMEM131LA2VDJ0 1609 aa14.74□□□□□ -0.05
TMEM55B-205ENST00000554028 NUTM2DQ5VT03 806 aaPredicted RBP14.74□□□□□ -0.05
TMEM55B-205ENST00000554028 ZFYVE9O95405 1425 aa14.74□□□□□ -0.05
TMEM55B-205ENST00000554028 RIMS2Q9UQ26 1411 aa14.74□□□□□ -0.05
TMEM55B-205ENST00000554028 KDM4FA0A1W2PPD8 638 aa14.73□□□□□ -0.05
TMEM55B-205ENST00000554028 BCANQ96GW7 911 aa14.73□□□□□ -0.05
TMEM55B-205ENST00000554028 RALGAPBQ86X10 1494 aa14.73□□□□□ -0.05
TMEM55B-205ENST00000554028 TMEM2Q9UHN6 1383 aa14.72□□□□□ -0.05
TMEM55B-205ENST00000554028 TXNDC2Q86VQ3 553 aa14.71□□□□□ -0.05
TMEM55B-205ENST00000554028 C14orf93Q9H972 538 aaKnown RBP14.71□□□□□ -0.05
TMEM55B-205ENST00000554028 NBPF1Q3BBV0 1214 aa14.7□□□□□ -0.06
TMEM55B-205ENST00000554028 CFAP70Q5T0N1 1121 aa14.7□□□□□ -0.06
TMEM55B-205ENST00000554028 NEXMIFQ5QGS0 1516 aa14.7□□□□□ -0.06
TMEM55B-205ENST00000554028 KDM5AP29375 1690 aaKnown RBP14.69□□□□□ -0.06
TMEM55B-205ENST00000554028 HSPA5P11021 654 aaKnown RBP14.69□□□□□ -0.06
TMEM55B-205ENST00000554028 NRXN1Q9ULB1 1477 aa14.69□□□□□ -0.06
TMEM55B-205ENST00000554028 ANKLE2Q86XL3 938 aa14.68□□□□□ -0.06
TMEM55B-205ENST00000554028 PIK3C2GO75747 1445 aa14.67□□□□□ -0.06
TMEM55B-205ENST00000554028 GPRASP1Q5JY77 1395 aa14.67□□□□□ -0.06
TMEM55B-205ENST00000554028 USP47Q96K76 1375 aa14.67□□□□□ -0.06
TMEM55B-205ENST00000554028 PPLO60437 1756 aa14.67□□□□□ -0.06
TMEM55B-205ENST00000554028 MYO3AQ8NEV4 1616 aa14.66□□□□□ -0.06
TMEM55B-205ENST00000554028 SETD1BQ9UPS6 1966 aaKnown RBP14.65□□□□□ -0.06
TMEM55B-205ENST00000554028 CEP170BQ9Y4F5 1589 aaPredicted RBP14.65□□□□□ -0.06
TMEM55B-205ENST00000554028 UBR1Q8IWV7 1749 aa14.65□□□□□ -0.06
TMEM55B-205ENST00000554028 IFT172Q9UG01 1749 aa14.65□□□□□ -0.06
TMEM55B-205ENST00000554028 TRPM1Q7Z4N2 1603 aa14.65□□□□□ -0.06
TMEM55B-205ENST00000554028 EIF3AQ14152 1382 aaKnown RBP14.64□□□□□ -0.07
TMEM55B-205ENST00000554028 SLC24A1O60721 1099 aa14.64□□□□□ -0.07
TMEM55B-205ENST00000554028 LTKP29376 864 aa14.64□□□□□ -0.07
TMEM55B-205ENST00000554028 HIRIP3Q9BW71 556 aaPredicted RBP14.64□□□□□ -0.07
TMEM55B-205ENST00000554028 SLIT1O75093 1534 aa14.63□□□□□ -0.07
TMEM55B-205ENST00000554028 PLEKHG1Q9ULL1 1385 aa14.62□□□□□ -0.07
TMEM55B-205ENST00000554028 ST20-MTHFSA0A0A6YYL1 179 aa14.62□□□□□ -0.07
TMEM55B-205ENST00000554028 TMEM132EQ6IEE7 984 aa14.62□□□□□ -0.07
TMEM55B-205ENST00000554028 KIAA1210Q9ULL0 1709 aa14.62□□□□□ -0.07
TMEM55B-205ENST00000554028 SCAF11Q99590 1463 aaKnown RBP14.62□□□□□ -0.07
TMEM55B-205ENST00000554028 ARHGAP23Q9P227 1491 aa14.62□□□□□ -0.07
TMEM55B-205ENST00000554028 MYO5BQ9ULV0 1848 aa14.62□□□□□ -0.07
TMEM55B-205ENST00000554028 TRAK1Q9UPV9 953 aa14.6□□□□□ -0.07
TMEM55B-205ENST00000554028 SETBP1Q9Y6X0 1596 aa14.6□□□□□ -0.07
TMEM55B-205ENST00000554028 LAMC1P11047 1609 aa14.59□□□□□ -0.07
TMEM55B-205ENST00000554028 STK26Q9P289 416 aa14.59□□□□□ -0.07
TMEM55B-205ENST00000554028 TBX22Q9Y458 520 aa14.59□□□□□ -0.07
TMEM55B-205ENST00000554028 ZNF142P52746 1687 aaPredicted RBP14.58□□□□□ -0.07
TMEM55B-205ENST00000554028 ALKQ9UM73 1620 aa14.57□□□□□ -0.08
TMEM55B-205ENST00000554028 SLC26A8Q96RN1 970 aa14.57□□□□□ -0.08
TMEM55B-205ENST00000554028 TMF1P82094 1093 aa14.56□□□□□ -0.08
TMEM55B-205ENST00000554028 CDCA8Q53HL2 280 aa14.56□□□□□ -0.08
TMEM55B-205ENST00000554028 POGKQ9P215 609 aa14.56□□□□□ -0.08
TMEM55B-205ENST00000554028 CENPJQ9HC77 1338 aaPredicted RBP14.56□□□□□ -0.08
TMEM55B-205ENST00000554028 LRPPRCP42704 1394 aaKnown RBP14.54□□□□□ -0.08
TMEM55B-205ENST00000554028 YTHDC2Q9H6S0 1430 aaKnown RBP14.54□□□□□ -0.08
TMEM55B-205ENST00000554028 ADGRB1O14514 1584 aa14.54□□□□□ -0.08
TMEM55B-205ENST00000554028 ABCC11Q96J66 1382 aa14.53□□□□□ -0.08
TMEM55B-205ENST00000554028 NCKAP5LQ9HCH0 1330 aa14.53□□□□□ -0.08
TMEM55B-205ENST00000554028 POLR3GLQ9BT43 218 aa14.53□□□□□ -0.08
TMEM55B-205ENST00000554028 NPHP4O75161 1426 aaPredicted RBP14.52□□□□□ -0.08
TMEM55B-205ENST00000554028 ADAMTS13Q76LX8 1427 aa14.52□□□□□ -0.08
TMEM55B-205ENST00000554028 METP08581 1390 aa14.52□□□□□ -0.08
TMEM55B-205ENST00000554028 SIRT1Q96EB6 747 aa14.52□□□□□ -0.09
TMEM55B-205ENST00000554028 PIK3R4Q99570 1358 aa14.51□□□□□ -0.09
TMEM55B-205ENST00000554028 HSPA2P54652 639 aa14.51□□□□□ -0.09
TMEM55B-205ENST00000554028 DIEXFQ68CQ4 756 aaKnown RBP14.51□□□□□ -0.09
TMEM55B-205ENST00000554028 TESK2Q96S53 571 aa14.51□□□□□ -0.09
TMEM55B-205ENST00000554028 POTEHQ6S545 545 aa14.5□□□□□ -0.09
TMEM55B-205ENST00000554028 PRAM1Q96QH2 718 aa14.5□□□□□ -0.09
TMEM55B-205ENST00000554028 AMOTL2Q9Y2J4 779 aa14.5□□□□□ -0.09
TMEM55B-205ENST00000554028 DIP2AQ14689 1571 aa14.5□□□□□ -0.09
TMEM55B-205ENST00000554028 CCDC7Q96M83 1385 aa14.49□□□□□ -0.09
TMEM55B-205ENST00000554028 WASHC2AQ641Q2 1341 aa14.49□□□□□ -0.09
TMEM55B-205ENST00000554028 DDX10Q13206 875 aaKnown RBP14.49□□□□□ -0.09
TMEM55B-205ENST00000554028 MED14O60244 1454 aa14.49□□□□□ -0.09
TMEM55B-205ENST00000554028 IQGAP1P46940 1657 aa14.49□□□□□ -0.09
TMEM55B-205ENST00000554028 SBNO2Q9Y2G9 1366 aa14.48□□□□□ -0.09
TMEM55B-205ENST00000554028 KIF7Q2M1P5 1343 aa14.48□□□□□ -0.09
TMEM55B-205ENST00000554028 C11orf95C9JLR9 678 aaPredicted RBP14.48□□□□□ -0.09
TMEM55B-205ENST00000554028 SAFB2Q14151 953 aaKnown RBP eCLIP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms