RNA–Protein interactions for RNA: ENST00000553927.1

RPGRIP1-204, Transcript of RPGR interacting protein 1, humanhuman

TSL 2

Gene RPGRIP1, Length 2,875 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-204ENST00000553927 CC2D2AQ9P2K1 1620 aa8.61□□□□□ -1.03
RPGRIP1-204ENST00000553927 KIAA0586Q9BVV6 1533 aa8.61□□□□□ -1.03
RPGRIP1-204ENST00000553927 PPP2R1AP30153 589 aa8.61□□□□□ -1.03
RPGRIP1-204ENST00000553927 EIF3AQ14152 1382 aaKnown RBP8.61□□□□□ -1.03
RPGRIP1-204ENST00000553927 EPRSP07814 1512 aaKnown RBP8.61□□□□□ -1.03
RPGRIP1-204ENST00000553927 C22orf23Q9BZE7 217 aa8.6□□□□□ -1.03
RPGRIP1-204ENST00000553927 RRP7AQ9Y3A4 280 aaKnown RBP8.6□□□□□ -1.03
RPGRIP1-204ENST00000553927 CAMSAP2Q08AD1 1489 aa8.6□□□□□ -1.03
RPGRIP1-204ENST00000553927 ZNF608Q9ULD9 1512 aaPredicted RBP8.6□□□□□ -1.03
RPGRIP1-204ENST00000553927 RLBP1P12271 317 aa8.6□□□□□ -1.03
RPGRIP1-204ENST00000553927 CALD1Q05682 793 aaKnown RBP8.6□□□□□ -1.03
RPGRIP1-204ENST00000553927 CFDP1Q9UEE9 299 aaPredicted RBP8.6□□□□□ -1.03
RPGRIP1-204ENST00000553927 ROCK1Q13464 1354 aa8.6□□□□□ -1.03
RPGRIP1-204ENST00000553927 CADPSQ9ULU8 1353 aa8.6□□□□□ -1.03
RPGRIP1-204ENST00000553927 POLA1P09884 1462 aaPredicted RBP8.6□□□□□ -1.03
RPGRIP1-204ENST00000553927 AAMPQ13685 434 aa8.59□□□□□ -1.03
RPGRIP1-204ENST00000553927 E9PCH4 1651 aa8.59□□□□□ -1.03
RPGRIP1-204ENST00000553927 ZNF521Q96K83 1311 aa8.59□□□□□ -1.03
RPGRIP1-204ENST00000553927 XPCQ01831 940 aaPredicted RBP8.59□□□□□ -1.03
RPGRIP1-204ENST00000553927 HSCBQ8IWL3 235 aa8.59□□□□□ -1.03
RPGRIP1-204ENST00000553927 TNPO1Q92973 898 aaKnown RBP8.59□□□□□ -1.03
RPGRIP1-204ENST00000553927 SAMD9Q5K651 1589 aa8.59□□□□□ -1.03
RPGRIP1-204ENST00000553927 CENPJQ9HC77 1338 aaPredicted RBP8.59□□□□□ -1.03
RPGRIP1-204ENST00000553927 MSNP26038 577 aaKnown RBP8.59□□□□□ -1.04
RPGRIP1-204ENST00000553927 KNSTRNQ9Y448 316 aa8.59□□□□□ -1.04
RPGRIP1-204ENST00000553927 HMGXB3Q12766 1538 aa8.58□□□□□ -1.04
RPGRIP1-204ENST00000553927 DDX11L8A8MPP1 907 aa8.58□□□□□ -1.04
RPGRIP1-204ENST00000553927 KIF21AQ7Z4S6 1674 aa8.58□□□□□ -1.04
RPGRIP1-204ENST00000553927 NESP48681 1621 aa8.58□□□□□ -1.04
RPGRIP1-204ENST00000553927 NASPP49321 788 aaPredicted RBP8.58□□□□□ -1.04
RPGRIP1-204ENST00000553927 JARID2Q92833 1246 aaPredicted RBP8.58□□□□□ -1.04
RPGRIP1-204ENST00000553927 PLEKHH2Q8IVE3 1493 aa8.58□□□□□ -1.04
RPGRIP1-204ENST00000553927 CGNL1Q0VF96 1302 aa8.57□□□□□ -1.04
RPGRIP1-204ENST00000553927 NCLP19338 710 aaKnown RBP8.57□□□□□ -1.04
RPGRIP1-204ENST00000553927 UHRF1BP1Q6BDS2 1440 aa8.57□□□□□ -1.04
RPGRIP1-204ENST00000553927 UQCRHLA0A096LP55 91 aa8.57□□□□□ -1.04
RPGRIP1-204ENST00000553927 UQCRHP07919 91 aa8.57□□□□□ -1.04
RPGRIP1-204ENST00000553927 TESK2Q96S53 571 aa8.57□□□□□ -1.04
RPGRIP1-204ENST00000553927 NKTRP30414 1462 aaKnown RBP8.57□□□□□ -1.04
RPGRIP1-204ENST00000553927 FANCD2Q9BXW9 1451 aa8.57□□□□□ -1.04
RPGRIP1-204ENST00000553927 HSP90AB1P08238 724 aaKnown RBP8.56□□□□□ -1.04
RPGRIP1-204ENST00000553927 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.56□□□□□ -1.04
RPGRIP1-204ENST00000553927 ABCA10Q8WWZ4 1543 aa8.56□□□□□ -1.04
RPGRIP1-204ENST00000553927 DNMT1P26358 1616 aaKnown RBP8.56□□□□□ -1.04
RPGRIP1-204ENST00000553927 ZSCAN30Q86W11 494 aa8.56□□□□□ -1.04
RPGRIP1-204ENST00000553927 VIRMAQ69YN4 1812 aaKnown RBP8.56□□□□□ -1.04
RPGRIP1-204ENST00000553927 TNNT2P45379 298 aaPredicted RBP8.55□□□□□ -1.04
RPGRIP1-204ENST00000553927 ZNF692Q9BU19 519 aaPredicted RBP8.55□□□□□ -1.04
RPGRIP1-204ENST00000553927 TMF1P82094 1093 aa8.55□□□□□ -1.04
RPGRIP1-204ENST00000553927 MAPK8IP2Q13387 824 aaPredicted RBP8.55□□□□□ -1.04
RPGRIP1-204ENST00000553927 MPNDQ8N594 471 aa8.55□□□□□ -1.04
RPGRIP1-204ENST00000553927 TSC1Q92574 1164 aa8.55□□□□□ -1.04
RPGRIP1-204ENST00000553927 ANKRD50Q9ULJ7 1429 aa8.55□□□□□ -1.04
RPGRIP1-204ENST00000553927 OFD1O75665 1012 aa8.55□□□□□ -1.04
RPGRIP1-204ENST00000553927 E9PSI1 815 aa8.54□□□□□ -1.04
RPGRIP1-204ENST00000553927 SSFA2P28290 1259 aa8.54□□□□□ -1.04
RPGRIP1-204ENST00000553927 ANP32BQ92688 251 aaKnown RBP8.54□□□□□ -1.04
RPGRIP1-204ENST00000553927 CUL7Q14999 1698 aa8.54□□□□□ -1.04
RPGRIP1-204ENST00000553927 CD2BP2O95400 341 aaKnown RBP8.54□□□□□ -1.04
RPGRIP1-204ENST00000553927 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.54□□□□□ -1.04
RPGRIP1-204ENST00000553927 ERBINQ96RT1 1412 aa8.54□□□□□ -1.04
RPGRIP1-204ENST00000553927 FAM177BA6PVY3 158 aa8.53□□□□□ -1.04
RPGRIP1-204ENST00000553927 CCDC173Q0VFZ6 552 aa8.53□□□□□ -1.04
RPGRIP1-204ENST00000553927 PMFBP1Q8TBY8 1022 aa8.53□□□□□ -1.04
RPGRIP1-204ENST00000553927 RBM42Q9BTD8 480 aaKnown RBP8.53□□□□□ -1.04
RPGRIP1-204ENST00000553927 COL17A1Q9UMD9 1497 aaPredicted RBP8.53□□□□□ -1.04
RPGRIP1-204ENST00000553927 PDE3AQ14432 1141 aa8.53□□□□□ -1.04
RPGRIP1-204ENST00000553927 TRMT2AQ8IZ69 625 aaKnown RBP8.53□□□□□ -1.04
RPGRIP1-204ENST00000553927 DDX49Q9Y6V7 483 aaKnown RBP8.53□□□□□ -1.04
RPGRIP1-204ENST00000553927 TOPBP1Q92547 1522 aa8.53□□□□□ -1.04
RPGRIP1-204ENST00000553927 PRG4Q92954 1404 aaPredicted RBP8.53□□□□□ -1.04
RPGRIP1-204ENST00000553927 FGD1P98174 961 aa8.52□□□□□ -1.04
RPGRIP1-204ENST00000553927 GBP4Q96PP9 640 aa8.52□□□□□ -1.04
RPGRIP1-204ENST00000553927 RTEL1-TNFRSF6BF6WH68 1400 aa8.52□□□□□ -1.05
RPGRIP1-204ENST00000553927 MAGI2Q86UL8 1455 aa8.52□□□□□ -1.05
RPGRIP1-204ENST00000553927 CHAMP1Q96JM3 812 aa8.52□□□□□ -1.05
RPGRIP1-204ENST00000553927 CAVIN1Q6NZI2 390 aaKnown RBP8.51□□□□□ -1.05
RPGRIP1-204ENST00000553927 ANKRD30AQ9BXX3 1397 aa8.51□□□□□ -1.05
RPGRIP1-204ENST00000553927 PRAG1Q86YV5 1406 aa8.51□□□□□ -1.05
RPGRIP1-204ENST00000553927 RWDD1Q9H446 243 aaPredicted RBP8.51□□□□□ -1.05
RPGRIP1-204ENST00000553927 PRDM2Q13029 1718 aa8.51□□□□□ -1.05
RPGRIP1-204ENST00000553927 RARSP54136 660 aaKnown RBP8.51□□□□□ -1.05
RPGRIP1-204ENST00000553927 WWC1Q8IX03 1113 aa8.5□□□□□ -1.05
RPGRIP1-204ENST00000553927 RBM27Q9P2N5 1060 aaKnown RBP8.5□□□□□ -1.05
RPGRIP1-204ENST00000553927 IGSF3O75054 1194 aa8.5□□□□□ -1.05
RPGRIP1-204ENST00000553927 MCTP1Q6DN14 999 aa8.5□□□□□ -1.05
RPGRIP1-204ENST00000553927 FTSJ3Q8IY81 847 aaKnown RBP8.5□□□□□ -1.05
RPGRIP1-204ENST00000553927 GAPVD1Q14C86 1478 aa8.49□□□□□ -1.05
RPGRIP1-204ENST00000553927 HNRNPMP52272 730 aaKnown RBP eCLIP8.49□□□□□ -1.05
RPGRIP1-204ENST00000553927 CBX1P83916 185 aa8.49□□□□□ -1.05
RPGRIP1-204ENST00000553927 RAB3GAP1Q15042 981 aa8.49□□□□□ -1.05
RPGRIP1-204ENST00000553927 FOXD4L5Q5VV16 416 aaPredicted RBP8.49□□□□□ -1.05
RPGRIP1-204ENST00000553927 RNF214Q8ND24 703 aa8.49□□□□□ -1.05
RPGRIP1-204ENST00000553927 FOXD4L4Q8WXT5 416 aaPredicted RBP8.49□□□□□ -1.05
RPGRIP1-204ENST00000553927 PPP1R9BQ96SB3 815 aa8.49□□□□□ -1.05
RPGRIP1-204ENST00000553927 LNPKQ9C0E8 428 aa8.49□□□□□ -1.05
RPGRIP1-204ENST00000553927 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.49□□□□□ -1.05
RPGRIP1-204ENST00000553927 ARHGEF12Q9NZN5 1544 aa8.49□□□□□ -1.05
RPGRIP1-204ENST00000553927 RBSNQ9H1K0 784 aa8.49□□□□□ -1.05
RPGRIP1-204ENST00000553927 DNMBPQ6XZF7 1577 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms