RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 RIMS2Q9UQ26 1411 aa9.77□□□□□ -0.85
FOXN3-205ENST00000553904 C14orf37Q86TY3 774 aa9.76□□□□□ -0.85
FOXN3-205ENST00000553904 TET3O43151 1660 aa9.76□□□□□ -0.85
FOXN3-205ENST00000553904 ADGRB3O60242 1522 aa9.76□□□□□ -0.85
FOXN3-205ENST00000553904 TMEM94Q12767 1356 aa9.75□□□□□ -0.85
FOXN3-205ENST00000553904 SYNMO15061 1565 aa9.75□□□□□ -0.85
FOXN3-205ENST00000553904 SLC4A1APQ9BWU0 796 aaKnown RBP9.75□□□□□ -0.85
FOXN3-205ENST00000553904 MSH6P52701 1360 aa9.75□□□□□ -0.85
FOXN3-205ENST00000553904 VGFO15240 615 aaPredicted RBP9.74□□□□□ -0.85
FOXN3-205ENST00000553904 NUTM2DQ5VT03 806 aaPredicted RBP9.74□□□□□ -0.85
FOXN3-205ENST00000553904 PHF23Q9BUL5 403 aaPredicted RBP9.74□□□□□ -0.85
FOXN3-205ENST00000553904 SENP3Q9H4L4 574 aaPredicted RBP9.74□□□□□ -0.85
FOXN3-205ENST00000553904 SLAIN2Q9P270 581 aa9.74□□□□□ -0.85
FOXN3-205ENST00000553904 UNC13BO14795 1591 aa9.74□□□□□ -0.85
FOXN3-205ENST00000553904 PIK3R4Q99570 1358 aa9.74□□□□□ -0.85
FOXN3-205ENST00000553904 FAM135BQ49AJ0 1406 aa9.73□□□□□ -0.85
FOXN3-205ENST00000553904 NCOA3Q9Y6Q9 1424 aa9.73□□□□□ -0.85
FOXN3-205ENST00000553904 SOCS7O14512 581 aa9.73□□□□□ -0.85
FOXN3-205ENST00000553904 ATF3P18847 181 aa9.73□□□□□ -0.85
FOXN3-205ENST00000553904 CADPS2Q86UW7 1296 aa9.73□□□□□ -0.85
FOXN3-205ENST00000553904 C19orf44Q9H6X5 657 aa9.73□□□□□ -0.85
FOXN3-205ENST00000553904 ZFYVE9O95405 1425 aa9.73□□□□□ -0.85
FOXN3-205ENST00000553904 ILDR2Q71H61 639 aa9.72□□□□□ -0.85
FOXN3-205ENST00000553904 AMOTL2Q9Y2J4 779 aa9.72□□□□□ -0.85
FOXN3-205ENST00000553904 NAIPQ13075 1403 aa9.72□□□□□ -0.85
FOXN3-205ENST00000553904 IQGAP3Q86VI3 1631 aa9.71□□□□□ -0.85
FOXN3-205ENST00000553904 GCC2Q8IWJ2 1684 aa9.71□□□□□ -0.85
FOXN3-205ENST00000553904 RBM33Q96EV2 1170 aaKnown RBP9.71□□□□□ -0.86
FOXN3-205ENST00000553904 RPGRIP1LQ68CZ1 1315 aa9.71□□□□□ -0.86
FOXN3-205ENST00000553904 NKTRP30414 1462 aaKnown RBP9.71□□□□□ -0.86
FOXN3-205ENST00000553904 HFM1A2PYH4 1435 aa9.7□□□□□ -0.86
FOXN3-205ENST00000553904 TMEM131LA2VDJ0 1609 aa9.7□□□□□ -0.86
FOXN3-205ENST00000553904 E9PCH4 1651 aa9.68□□□□□ -0.86
FOXN3-205ENST00000553904 MPHOSPH9Q99550 1183 aa9.67□□□□□ -0.86
FOXN3-205ENST00000553904 STRCP1A6NGW2 1772 aa9.67□□□□□ -0.86
FOXN3-205ENST00000553904 ADAMTS13Q76LX8 1427 aa9.66□□□□□ -0.86
FOXN3-205ENST00000553904 DIP2AQ14689 1571 aa9.66□□□□□ -0.86
FOXN3-205ENST00000553904 TRPM2O94759 1503 aa9.65□□□□□ -0.86
FOXN3-205ENST00000553904 ALKQ9UM73 1620 aa9.64□□□□□ -0.87
FOXN3-205ENST00000553904 NWD1Q149M9 1564 aa9.63□□□□□ -0.87
FOXN3-205ENST00000553904 RGL3Q3MIN7 710 aa9.63□□□□□ -0.87
FOXN3-205ENST00000553904 JCADQ9P266 1359 aa9.63□□□□□ -0.87
FOXN3-205ENST00000553904 CCDC144AA2RUR9 1427 aa9.62□□□□□ -0.87
FOXN3-205ENST00000553904 METP08581 1390 aa9.62□□□□□ -0.87
FOXN3-205ENST00000553904 CHD2O14647 1828 aaKnown RBP9.61□□□□□ -0.87
FOXN3-205ENST00000553904 SPATA31A6Q5VVP1 1343 aa9.61□□□□□ -0.87
FOXN3-205ENST00000553904 FOXD1Q16676 465 aa9.61□□□□□ -0.87
FOXN3-205ENST00000553904 LRRC59Q96AG4 307 aaKnown RBP9.61□□□□□ -0.87
FOXN3-205ENST00000553904 DCCP43146 1447 aa9.61□□□□□ -0.87
FOXN3-205ENST00000553904 SETD5Q9C0A6 1442 aa9.61□□□□□ -0.87
FOXN3-205ENST00000553904 MED1Q15648 1581 aaPredicted RBP9.61□□□□□ -0.87
FOXN3-205ENST00000553904 SPHKAPQ2M3C7 1700 aa9.61□□□□□ -0.87
FOXN3-205ENST00000553904 ANKRD30BQ9BXX2 1392 aa9.61□□□□□ -0.87
FOXN3-205ENST00000553904 SETBP1Q9Y6X0 1596 aa9.6□□□□□ -0.87
FOXN3-205ENST00000553904 PTPRUQ92729 1446 aa9.6□□□□□ -0.87
FOXN3-205ENST00000553904 HRCP23327 699 aa9.6□□□□□ -0.87
FOXN3-205ENST00000553904 MEX3CQ5U5Q3 659 aaKnown RBP9.6□□□□□ -0.87
FOXN3-205ENST00000553904 BRINP3Q76B58 766 aa9.59□□□□□ -0.87
FOXN3-205ENST00000553904 STAC3Q96MF2 364 aa9.59□□□□□ -0.87
FOXN3-205ENST00000553904 MYO5BQ9ULV0 1848 aa9.59□□□□□ -0.88
FOXN3-205ENST00000553904 ZNF772Q68DY9 489 aaPredicted RBP9.58□□□□□ -0.88
FOXN3-205ENST00000553904 XIRP1Q702N8 1843 aaKnown RBP9.58□□□□□ -0.88
FOXN3-205ENST00000553904 ROBO1Q9Y6N7 1651 aa9.57□□□□□ -0.88
FOXN3-205ENST00000553904 NEXMIFQ5QGS0 1516 aa9.56□□□□□ -0.88
FOXN3-205ENST00000553904 CLTCL1P53675 1640 aa9.56□□□□□ -0.88
FOXN3-205ENST00000553904 SIRT1Q96EB6 747 aa9.56□□□□□ -0.88
FOXN3-205ENST00000553904 STK26Q9P289 416 aa9.56□□□□□ -0.88
FOXN3-205ENST00000553904 RGS17Q9UGC6 210 aaPredicted RBP9.56□□□□□ -0.88
FOXN3-205ENST00000553904 KIF1BO60333 1816 aa9.56□□□□□ -0.88
FOXN3-205ENST00000553904 ADGRF5Q8IZF2 1346 aa9.56□□□□□ -0.88
FOXN3-205ENST00000553904 ADGRL3Q9HAR2 1447 aa9.55□□□□□ -0.88
FOXN3-205ENST00000553904 NUTM2BA6NNL0 878 aaPredicted RBP9.54□□□□□ -0.88
FOXN3-205ENST00000553904 NUTM2EB1AL46 878 aaPredicted RBP9.54□□□□□ -0.88
FOXN3-205ENST00000553904 ESCO1Q5FWF5 840 aa9.54□□□□□ -0.88
FOXN3-205ENST00000553904 NUTM2AQ8IVF1 878 aaPredicted RBP9.54□□□□□ -0.88
FOXN3-205ENST00000553904 C14orf93Q9H972 538 aaKnown RBP9.54□□□□□ -0.88
FOXN3-205ENST00000553904 PTCH1Q13635 1447 aa9.54□□□□□ -0.88
FOXN3-205ENST00000553904 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.53□□□□□ -0.88
FOXN3-205ENST00000553904 LRPPRCP42704 1394 aaKnown RBP9.53□□□□□ -0.88
FOXN3-205ENST00000553904 DHX57Q6P158 1386 aaKnown RBP9.53□□□□□ -0.88
FOXN3-205ENST00000553904 ABCC11Q96J66 1382 aa9.53□□□□□ -0.88
FOXN3-205ENST00000553904 RAB3GAP2Q9H2M9 1393 aa9.53□□□□□ -0.88
FOXN3-205ENST00000553904 ROBO2Q9HCK4 1378 aa9.53□□□□□ -0.88
FOXN3-205ENST00000553904 TMEM132EQ6IEE7 984 aa9.53□□□□□ -0.88
FOXN3-205ENST00000553904 POTEAQ6S8J7 498 aa9.53□□□□□ -0.88
FOXN3-205ENST00000553904 MST1RQ04912 1400 aa9.53□□□□□ -0.88
FOXN3-205ENST00000553904 PHLPP1O60346 1717 aa9.52□□□□□ -0.89
FOXN3-205ENST00000553904 SPATA31E1Q6ZUB1 1445 aa9.52□□□□□ -0.89
FOXN3-205ENST00000553904 ORAI2Q96SN7 254 aa9.52□□□□□ -0.89
FOXN3-205ENST00000553904 NPHP3Q7Z494 1330 aa9.52□□□□□ -0.89
FOXN3-205ENST00000553904 PRAG1Q86YV5 1406 aa9.51□□□□□ -0.89
FOXN3-205ENST00000553904 RXRBP28702 533 aa9.51□□□□□ -0.89
FOXN3-205ENST00000553904 WAPLQ7Z5K2 1190 aa9.51□□□□□ -0.89
FOXN3-205ENST00000553904 POGKQ9P215 609 aa9.51□□□□□ -0.89
FOXN3-205ENST00000553904 NRXN3Q9Y4C0 1643 aa9.51□□□□□ -0.89
FOXN3-205ENST00000553904 XRN1Q8IZH2 1706 aaKnown RBP9.51□□□□□ -0.89
FOXN3-205ENST00000553904 AHDC1Q5TGY3 1603 aaPredicted RBP9.5□□□□□ -0.89
FOXN3-205ENST00000553904 CFAP70Q5T0N1 1121 aa9.5□□□□□ -0.89
FOXN3-205ENST00000553904 DCAF11Q8TEB1 546 aa9.5□□□□□ -0.89
FOXN3-205ENST00000553904 NGLY1Q96IV0 654 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms