RNA–Protein interactions for RNA: ENST00000553871.5

EFCAB11-204, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-204ENST00000553871 RABGEF1Q9UJ41 708 aa7.31□□□□□ -1.24
EFCAB11-204ENST00000553871 DIXDC1Q155Q3 683 aa7.3□□□□□ -1.24
EFCAB11-204ENST00000553871 RSPH4AQ5TD94 716 aa7.3□□□□□ -1.24
EFCAB11-204ENST00000553871 DMRTA1Q5VZB9 504 aa7.3□□□□□ -1.24
EFCAB11-204ENST00000553871 HS3ST6Q96QI5 342 aa7.3□□□□□ -1.24
EFCAB11-204ENST00000553871 SLC4A5Q9BY07 1137 aa7.3□□□□□ -1.24
EFCAB11-204ENST00000553871 NBPF3Q9H094 633 aa7.3□□□□□ -1.24
EFCAB11-204ENST00000553871 SKIV2LQ15477 1246 aaKnown RBP7.28□□□□□ -1.24
EFCAB11-204ENST00000553871 POTEEQ6S8J3 1075 aa7.28□□□□□ -1.24
EFCAB11-204ENST00000553871 NUTM1Q86Y26 1132 aa7.28□□□□□ -1.24
EFCAB11-204ENST00000553871 POLR3EQ9NVU0 708 aa7.28□□□□□ -1.24
EFCAB11-204ENST00000553871 VPS9D1Q9Y2B5 631 aa7.28□□□□□ -1.24
EFCAB11-204ENST00000553871 CD46P15529 392 aa7.27□□□□□ -1.25
EFCAB11-204ENST00000553871 FAM98CQ17RN3 349 aaKnown RBP7.27□□□□□ -1.25
EFCAB11-204ENST00000553871 TBC1D2Q9BYX2 928 aa7.27□□□□□ -1.25
EFCAB11-204ENST00000553871 RNF40O75150 1001 aa7.26□□□□□ -1.25
EFCAB11-204ENST00000553871 CLK2P49760 499 aaKnown RBP7.26□□□□□ -1.25
EFCAB11-204ENST00000553871 SWT1Q5T5J6 900 aaKnown RBP7.26□□□□□ -1.25
EFCAB11-204ENST00000553871 MYSM1Q5VVJ2 828 aa7.26□□□□□ -1.25
EFCAB11-204ENST00000553871 STAC3Q96MF2 364 aa7.26□□□□□ -1.25
EFCAB11-204ENST00000553871 POTEB3A0JP26 581 aa7.25□□□□□ -1.25
EFCAB11-204ENST00000553871 POTEBQ6S5H4 581 aa7.25□□□□□ -1.25
EFCAB11-204ENST00000553871 LAPTM4BQ86VI4 370 aa7.25□□□□□ -1.25
EFCAB11-204ENST00000553871 TK2O00142 265 aa7.24□□□□□ -1.25
EFCAB11-204ENST00000553871 LSM11P83369 360 aaKnown RBP eCLIP7.24□□□□□ -1.25
EFCAB11-204ENST00000553871 SLF2Q8IX21 1173 aa7.24□□□□□ -1.25
EFCAB11-204ENST00000553871 MRPL50Q8N5N7 158 aaKnown RBP7.24□□□□□ -1.25
EFCAB11-204ENST00000553871 SPIRE2Q8WWL2 714 aa7.23□□□□□ -1.25
EFCAB11-204ENST00000553871 GOLGA8CPA6NN73 597 aa7.22□□□□□ -1.25
EFCAB11-204ENST00000553871 KDM4AO75164 1064 aa7.22□□□□□ -1.25
EFCAB11-204ENST00000553871 FLIIQ13045 1269 aa7.22□□□□□ -1.25
EFCAB11-204ENST00000553871 ADGRD1Q6QNK2 874 aa7.22□□□□□ -1.25
EFCAB11-204ENST00000553871 SAMD7Q7Z3H4 446 aa7.22□□□□□ -1.25
EFCAB11-204ENST00000553871 RIC3Q7Z5B4 369 aa7.22□□□□□ -1.25
EFCAB11-204ENST00000553871 PROCA1Q8NCQ7 364 aaPredicted RBP7.22□□□□□ -1.25
EFCAB11-204ENST00000553871 ANKRD13DQ6ZTN6 518 aa7.21□□□□□ -1.26
EFCAB11-204ENST00000553871 NECTIN2Q92692 538 aa7.21□□□□□ -1.26
EFCAB11-204ENST00000553871 GCGRP47871 477 aa7.2□□□□□ -1.26
EFCAB11-204ENST00000553871 USP46P62068 366 aa7.2□□□□□ -1.26
EFCAB11-204ENST00000553871 CSPP1Q1MSJ5 1256 aa7.2□□□□□ -1.26
EFCAB11-204ENST00000553871 LRCH3Q96II8 777 aa7.2□□□□□ -1.26
EFCAB11-204ENST00000553871 ZFRQ96KR1 1074 aaKnown RBP7.2□□□□□ -1.26
EFCAB11-204ENST00000553871 MOXD2PA6NHM9 499 aa7.19□□□□□ -1.26
EFCAB11-204ENST00000553871 CFHP08603 1231 aa7.19□□□□□ -1.26
EFCAB11-204ENST00000553871 RSBN1LQ6PCB5 846 aaPredicted RBP7.19□□□□□ -1.26
EFCAB11-204ENST00000553871 ANKK1Q8NFD2 765 aa7.19□□□□□ -1.26
EFCAB11-204ENST00000553871 LIMD1Q9UGP4 676 aa7.19□□□□□ -1.26
EFCAB11-204ENST00000553871 BHMG1C9JSJ3 638 aaPredicted RBP7.18□□□□□ -1.26
EFCAB11-204ENST00000553871 SPTLC1O15269 473 aa7.18□□□□□ -1.26
EFCAB11-204ENST00000553871 SLC10A3P09131 477 aa7.18□□□□□ -1.26
EFCAB11-204ENST00000553871 KMT5BQ4FZB7 885 aa7.18□□□□□ -1.26
EFCAB11-204ENST00000553871 GRIPAP1Q4V328 841 aa7.18□□□□□ -1.26
EFCAB11-204ENST00000553871 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.18□□□□□ -1.26
EFCAB11-204ENST00000553871 NUTM2BA6NNL0 878 aaPredicted RBP7.17□□□□□ -1.26
EFCAB11-204ENST00000553871 NUTM2EB1AL46 878 aaPredicted RBP7.17□□□□□ -1.26
EFCAB11-204ENST00000553871 NDUFV2P19404 249 aa7.17□□□□□ -1.26
EFCAB11-204ENST00000553871 NUTM2DQ5VT03 806 aaPredicted RBP7.17□□□□□ -1.26
EFCAB11-204ENST00000553871 POTEGQ6S5H5 508 aa7.17□□□□□ -1.26
EFCAB11-204ENST00000553871 NUTM2AQ8IVF1 878 aaPredicted RBP7.17□□□□□ -1.26
EFCAB11-204ENST00000553871 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.17□□□□□ -1.26
EFCAB11-204ENST00000553871 POTEMA6NI47 508 aa7.16□□□□□ -1.26
EFCAB11-204ENST00000553871 HOXA2O43364 376 aa7.16□□□□□ -1.26
EFCAB11-204ENST00000553871 FDX1P10109 184 aa7.16□□□□□ -1.26
EFCAB11-204ENST00000553871 GJA5P36382 358 aa7.16□□□□□ -1.26
EFCAB11-204ENST00000553871 UBTFP17480 764 aaKnown RBP7.15□□□□□ -1.26
EFCAB11-204ENST00000553871 RFC5P40937 340 aa7.15□□□□□ -1.26
EFCAB11-204ENST00000553871 TUSC1Q2TAM9 212 aa7.15□□□□□ -1.26
EFCAB11-204ENST00000553871 PRR14Q9BWN1 585 aa7.15□□□□□ -1.26
EFCAB11-204ENST00000553871 HRO43593 1189 aa7.14□□□□□ -1.27
EFCAB11-204ENST00000553871 FUT2Q10981 343 aa7.14□□□□□ -1.27
EFCAB11-204ENST00000553871 TMEM259Q4ZIN3 620 aa7.14□□□□□ -1.27
EFCAB11-204ENST00000553871 ZMYND15Q9H091 742 aa7.14□□□□□ -1.27
EFCAB11-204ENST00000553871 ZBTB3Q9H5J0 574 aa7.14□□□□□ -1.27
EFCAB11-204ENST00000553871 PLSCR2Q9NRY7 297 aa7.14□□□□□ -1.27
EFCAB11-204ENST00000553871 MCM6Q14566 821 aa7.13□□□□□ -1.27
EFCAB11-204ENST00000553871 WNT2BQ93097 391 aa7.13□□□□□ -1.27
EFCAB11-204ENST00000553871 SUPT5HO00267 1087 aaKnown RBP7.12□□□□□ -1.27
EFCAB11-204ENST00000553871 ATP6V1AP38606 617 aa7.12□□□□□ -1.27
EFCAB11-204ENST00000553871 PPP4CP60510 307 aa7.12□□□□□ -1.27
EFCAB11-204ENST00000553871 GUCA2AQ02747 115 aa7.12□□□□□ -1.27
EFCAB11-204ENST00000553871 QPCTQ16769 361 aa7.12□□□□□ -1.27
EFCAB11-204ENST00000553871 PRPF38BQ5VTL8 546 aaKnown RBP7.12□□□□□ -1.27
EFCAB11-204ENST00000553871 PPP2R2DQ66LE6 453 aa7.12□□□□□ -1.27
EFCAB11-204ENST00000553871 CABLES1Q8TDN4 633 aa7.12□□□□□ -1.27
EFCAB11-204ENST00000553871 HPS5Q9UPZ3 1129 aa7.12□□□□□ -1.27
EFCAB11-204ENST00000553871 PCDHB15Q9Y5E8 787 aa7.12□□□□□ -1.27
EFCAB11-204ENST00000553871 SOWAHBA6NEL2 793 aa7.11□□□□□ -1.27
EFCAB11-204ENST00000553871 SPDYE5A6NIY4 337 aa7.11□□□□□ -1.27
EFCAB11-204ENST00000553871 C6orf229H3BNL8 230 aa7.11□□□□□ -1.27
EFCAB11-204ENST00000553871 RAD21O60216 631 aa7.11□□□□□ -1.27
EFCAB11-204ENST00000553871 LILRB3O75022 631 aa7.11□□□□□ -1.27
EFCAB11-204ENST00000553871 AP1G2O75843 785 aa7.11□□□□□ -1.27
EFCAB11-204ENST00000553871 BCAMP50895 628 aa7.11□□□□□ -1.27
EFCAB11-204ENST00000553871 BANK1Q8NDB2 785 aa7.11□□□□□ -1.27
EFCAB11-204ENST00000553871 TSC1Q92574 1164 aa7.11□□□□□ -1.27
EFCAB11-204ENST00000553871 HLA-CQ95604 372 aa7.11□□□□□ -1.27
EFCAB11-204ENST00000553871 APBB1O00213 710 aa7.1□□□□□ -1.27
EFCAB11-204ENST00000553871 HRCP23327 699 aa7.1□□□□□ -1.27
EFCAB11-204ENST00000553871 MTMR2Q13614 643 aa7.1□□□□□ -1.27
EFCAB11-204ENST00000553871 CDAN1Q8IWY9 1227 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms