RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 TULP1O00294 542 aaPredicted RBP10.49□□□□□ -0.73
SCFD1-210ENST00000553693 SMAPO00193 183 aa10.47□□□□□ -0.73
SCFD1-210ENST00000553693 NUDT18Q6ZVK8 323 aa10.47□□□□□ -0.73
SCFD1-210ENST00000553693 DGAT1O75907 488 aa10.46□□□□□ -0.73
SCFD1-210ENST00000553693 PKDCCQ504Y2 493 aa10.46□□□□□ -0.73
SCFD1-210ENST00000553693 RBM26Q5T8P6 1007 aaKnown RBP10.46□□□□□ -0.73
SCFD1-210ENST00000553693 EMID1Q96A84 441 aaPredicted RBP10.46□□□□□ -0.73
SCFD1-210ENST00000553693 APLP1P51693 650 aa10.45□□□□□ -0.74
SCFD1-210ENST00000553693 HDGFP51858 240 aaKnown RBP10.44□□□□□ -0.74
SCFD1-210ENST00000553693 C3orf80F5H4A9 247 aa10.43□□□□□ -0.74
SCFD1-210ENST00000553693 GGCXP38435 758 aa10.42□□□□□ -0.74
SCFD1-210ENST00000553693 HIC1Q14526 733 aa10.42□□□□□ -0.74
SCFD1-210ENST00000553693 TMUB1Q9BVT8 246 aa10.42□□□□□ -0.74
SCFD1-210ENST00000553693 SLC4A3P48751 1232 aa10.41□□□□□ -0.74
SCFD1-210ENST00000553693 GPIHBP1Q8IV16 184 aa10.41□□□□□ -0.74
SCFD1-210ENST00000553693 RBM46Q8TBY0 533 aaKnown RBP10.41□□□□□ -0.74
SCFD1-210ENST00000553693 LOC100996750A0A140TA64 210 aa10.4□□□□□ -0.74
SCFD1-210ENST00000553693 PRR20EP86478 221 aa10.4□□□□□ -0.74
SCFD1-210ENST00000553693 PRR20CP86479 221 aa10.4□□□□□ -0.74
SCFD1-210ENST00000553693 PRR20DP86480 221 aa10.4□□□□□ -0.74
SCFD1-210ENST00000553693 PRR20BP86481 221 aa10.4□□□□□ -0.74
SCFD1-210ENST00000553693 PRR20AP86496 221 aa10.4□□□□□ -0.74
SCFD1-210ENST00000553693 NECTIN2Q92692 538 aa10.4□□□□□ -0.74
SCFD1-210ENST00000553693 KRTAP4-6Q9BYQ5 205 aa10.4□□□□□ -0.74
SCFD1-210ENST00000553693 SLC19A1P41440 591 aa10.39□□□□□ -0.75
SCFD1-210ENST00000553693 EYA1Q99502 592 aa10.39□□□□□ -0.75
SCFD1-210ENST00000553693 ADGRG1Q9Y653 693 aa10.39□□□□□ -0.75
SCFD1-210ENST00000553693 GNPATO15228 680 aa10.37□□□□□ -0.75
SCFD1-210ENST00000553693 RNF40O75150 1001 aa10.37□□□□□ -0.75
SCFD1-210ENST00000553693 DNAJB2P25686 324 aa10.37□□□□□ -0.75
SCFD1-210ENST00000553693 SLF2Q8IX21 1173 aa10.37□□□□□ -0.75
SCFD1-210ENST00000553693 GPR37O15354 613 aa10.36□□□□□ -0.75
SCFD1-210ENST00000553693 COPS2P61201 443 aa10.36□□□□□ -0.75
SCFD1-210ENST00000553693 SPRYD7Q5W111 196 aa10.36□□□□□ -0.75
SCFD1-210ENST00000553693 STK17AQ9UEE5 414 aa10.36□□□□□ -0.75
SCFD1-210ENST00000553693 ST8SIA5O15466 376 aa10.35□□□□□ -0.75
SCFD1-210ENST00000553693 OATP04181 439 aa10.35□□□□□ -0.75
SCFD1-210ENST00000553693 SWT1Q5T5J6 900 aaKnown RBP10.35□□□□□ -0.75
SCFD1-210ENST00000553693 RNF223E7ERA6 249 aa10.34□□□□□ -0.75
SCFD1-210ENST00000553693 ZNF598Q86UK7 904 aaKnown RBP10.34□□□□□ -0.75
SCFD1-210ENST00000553693 AAASQ9NRG9 546 aa10.34□□□□□ -0.75
SCFD1-210ENST00000553693 FAM187AA6NFU0 413 aa10.33□□□□□ -0.76
SCFD1-210ENST00000553693 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.32□□□□□ -0.76
SCFD1-210ENST00000553693 TMEM134Q9H6X4 195 aa10.32□□□□□ -0.76
SCFD1-210ENST00000553693 RCCD1A6NED2 376 aa10.31□□□□□ -0.76
SCFD1-210ENST00000553693 GDF9O60383 454 aa10.31□□□□□ -0.76
SCFD1-210ENST00000553693 ZPR1O75312 459 aa10.31□□□□□ -0.76
SCFD1-210ENST00000553693 WFS1O76024 890 aa10.31□□□□□ -0.76
SCFD1-210ENST00000553693 FAM161AQ3B820 660 aa10.31□□□□□ -0.76
SCFD1-210ENST00000553693 PXYLP1Q8TE99 480 aa10.3□□□□□ -0.76
SCFD1-210ENST00000553693 WIPF1O43516 503 aa10.29□□□□□ -0.76
SCFD1-210ENST00000553693 METTL3Q86U44 580 aaKnown RBP10.29□□□□□ -0.76
SCFD1-210ENST00000553693 TNFRSF10AO00220 468 aa10.28□□□□□ -0.76
SCFD1-210ENST00000553693 FECHP22830 423 aa10.28□□□□□ -0.76
SCFD1-210ENST00000553693 LIAT1Q6ZQX7 453 aa10.28□□□□□ -0.76
SCFD1-210ENST00000553693 PRR14Q9BWN1 585 aa10.28□□□□□ -0.76
SCFD1-210ENST00000553693 NFX1Q12986 1120 aaKnown RBP10.27□□□□□ -0.77
SCFD1-210ENST00000553693 ZNF697Q5TEC3 545 aa10.26□□□□□ -0.77
SCFD1-210ENST00000553693 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.25□□□□□ -0.77
SCFD1-210ENST00000553693 DACH1Q9UI36 760 aa10.25□□□□□ -0.77
SCFD1-210ENST00000553693 MAP2K5Q13163 448 aa10.24□□□□□ -0.77
SCFD1-210ENST00000553693 LMOD2Q6P5Q4 547 aa10.24□□□□□ -0.77
SCFD1-210ENST00000553693 ANKLE1Q8NAG6 615 aa10.23□□□□□ -0.77
SCFD1-210ENST00000553693 PPEF1O14829 653 aaPredicted RBP10.22□□□□□ -0.77
SCFD1-210ENST00000553693 INSM1Q01101 510 aaPredicted RBP10.22□□□□□ -0.77
SCFD1-210ENST00000553693 LCE2CQ5TA81 110 aa10.22□□□□□ -0.77
SCFD1-210ENST00000553693 RSPH4AQ5TD94 716 aa10.22□□□□□ -0.77
SCFD1-210ENST00000553693 KMT5BQ4FZB7 885 aa10.21□□□□□ -0.77
SCFD1-210ENST00000553693 CRIPAKQ8N1N5 446 aa10.21□□□□□ -0.77
SCFD1-210ENST00000553693 SLC24A1O60721 1099 aa10.2□□□□□ -0.78
SCFD1-210ENST00000553693 MINK1Q8N4C8 1332 aaPredicted RBP10.19□□□□□ -0.78
SCFD1-210ENST00000553693 TLL1O43897 1013 aa10.19□□□□□ -0.78
SCFD1-210ENST00000553693 CFHP08603 1231 aa10.19□□□□□ -0.78
SCFD1-210ENST00000553693 GMPR2Q9P2T1 348 aaKnown RBP10.19□□□□□ -0.78
SCFD1-210ENST00000553693 DAXXQ9UER7 740 aaPredicted RBP10.19□□□□□ -0.78
SCFD1-210ENST00000553693 BLOC1S3Q6QNY0 202 aa10.18□□□□□ -0.78
SCFD1-210ENST00000553693 IRF6O14896 467 aa10.17□□□□□ -0.78
SCFD1-210ENST00000553693 SULF1Q8IWU6 871 aa10.17□□□□□ -0.78
SCFD1-210ENST00000553693 PCDHB3Q9Y5E6 796 aa10.17□□□□□ -0.78
SCFD1-210ENST00000553693 S1PR4O95977 384 aa10.16□□□□□ -0.78
SCFD1-210ENST00000553693 ACTN4O43707 911 aaKnown RBP10.15□□□□□ -0.78
SCFD1-210ENST00000553693 SLC10A3P09131 477 aa10.15□□□□□ -0.78
SCFD1-210ENST00000553693 PKD2L1Q9P0L9 805 aa10.15□□□□□ -0.78
SCFD1-210ENST00000553693 C11orf95C9JLR9 678 aaPredicted RBP10.14□□□□□ -0.79
SCFD1-210ENST00000553693 PLA2G2CQ5R387 149 aa10.14□□□□□ -0.79
SCFD1-210ENST00000553693 RDH13Q8NBN7 331 aa10.14□□□□□ -0.79
SCFD1-210ENST00000553693 NLRP7Q8WX94 980 aa10.14□□□□□ -0.79
SCFD1-210ENST00000553693 CCDC102AQ96A19 550 aa10.14□□□□□ -0.79
SCFD1-210ENST00000553693 PHOX2BQ99453 314 aa10.14□□□□□ -0.79
SCFD1-210ENST00000553693 DDX11L8A8MPP1 907 aa10.13□□□□□ -0.79
SCFD1-210ENST00000553693 AVPP01185 164 aa10.13□□□□□ -0.79
SCFD1-210ENST00000553693 KRI1Q8N9T8 703 aaKnown RBP10.1□□□□□ -0.79
SCFD1-210ENST00000553693 ZC3H15Q8WU90 426 aaKnown RBP10.1□□□□□ -0.79
SCFD1-210ENST00000553693 ZMYND10O75800 440 aa10.09□□□□□ -0.79
SCFD1-210ENST00000553693 BARGINQ6ZT62 677 aa10.09□□□□□ -0.79
SCFD1-210ENST00000553693 NR1I2O75469 434 aa10.08□□□□□ -0.8
SCFD1-210ENST00000553693 AXIN1O15169 862 aa10.07□□□□□ -0.8
SCFD1-210ENST00000553693 CLCN1P35523 988 aa10.07□□□□□ -0.8
SCFD1-210ENST00000553693 MDM2Q00987 491 aaPredicted RBP10.07□□□□□ -0.8
SCFD1-210ENST00000553693 FOXC1Q12948 553 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms